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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101890g1.104.mrna |
| Orig protein id | gnl|cribi|Naga_101890g1.104 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1360683..1362093 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1729 ID=rna1729|Name=rna1729|organism=Nannochloropsis gaditana|type=mRNA|length=2419bp
ATGACGGGTACAGGTAGCGCTGTCAAAGAGGGTGAGGTCCTGAACGCTTT
CCAAGAGATCAACGAGGACTTGCACGGCAAGGCCGAGGTTGTGGAGAAAT
GTCTTTCCATTATTCACCACCTCGGGCTCTCTGCCCGTGACTTGGCGAAT
GAATGGGAGGCTCATGCCATGAATCGCGGCTCGGACGATAGTAGTCAGGC
TCTCCTCAACCTGTCCTCCCTCGGGTCTTTGGAGGCAACCTTGAGCAAGC
GAGGAACAGGCGCGGGCGGGGCTACTGTCACCCCAGCCGCTTCCACGCGC
CGCAGCGGACGCGCGTCTTTCGACCCGAGCACGTTGCCTTCCACAGAACA
GGCCATGCGCAAGCGGCTGAGCTTGTCCGAGGACCCCGCCTCGGCAGAGA
AGTGGCCGGGGGCGGGAGCGTTCCTCTCTCCCTCTCCCTCCAAAGCGCCC
GTGAAGAGACGCCCCCCCTCCTCGGACGGCGCCGGCTTCATGTCCCCGCC
CGCGGCTGCTTCTTTCACGCCCTCGGCTGCTGCCTCCACGCCGGCCCCAA
TGCTCACCCCGGGTGGTCTGAGCTCGACCTCCTCCCCCCCCCTGTCCGCG
GGCGGGGCAACGGCCTACCTGAACCGAACTAACGCGGGGCAGAAAGCAGG
CACCCTCCCCGGCGCGCTGGACATCAACCTCCCCTCCCGCTACCGTTTCA
TGTACACCACCCTGGAGGAGCGGGCGCGGGCCCAGGAGAAAATGCTCTTG
CGTCTGCAAGACGACCTGGTGGCGCGGGGACTGGAGGCAGAGGCGGAGGT
CACGCCCGTGGGGGTGCCCAAGCAGGAGACGGTGACGGTGATAGGCCGCG
TGTGTTGTGAGGCGCCTGAGGGGAGGATCAACAAGGCCAGCGTCCTCTTG
GAAGGCTCCCGCCGGGACTCGGGCGGCTTCCGAGTCAAGCTCGAGCTCGG
TCAGCTGCCGGCTTTCTCCCTCTTCCCAGGCCAAGTCGTGGCCGTGGAGG
GCGTCAACAGCAGCGGCTTCAAGATGGTAGTGCGTCGCATCATCGAGGGC
ATCCCCCGGCCCTTTCTCACCTCTCCCGCCAAGAAGATGCTCGAGTTCCA
GCACGACAGTCTCTATCAAGGAGGAGGCGCCCTCAGCCTCTTGGTGGCGG
CTGGGCCTTACACCACCACGGACTCGCTCGAGTACGAACCCCTTGAAGAC
CTTCTTAAGGTCATCGCGGCGCGTCAGCCCGACGTAGCGGTGCTCTGCGG
CCCTTTCGTCGACGCCAATCACCCCCAGGTGGCGTCGGGTGAGACCGAGA
TCGCGGGGGCAGGGGAGGAGAAGGAGAGTGTGGACTTCGAGTCCCTCTTC
AAGATGCGCGTCTCGCTCTTCCTGGAGGGGCTCTACGACACGAACCCGAC
CTTGGCCTCGCGCATCGTCTTGGTCCCCTCCCTCAACGACGTCTTCCACG
ACCACCCCCCCCTGGCCGACCGCATTCCCGGCGGTGTCCCCTCCCCATGG
TTTGAGGAGGAGCGGTTGGGAGACTTGGGCCTCCCATTTGCAAGCGAAAA
AGACGGAGCGGACAAGCGGCTGTACTGCCTGAGTAATCCCTCTTTCTTTA
CTGTCAACGAGGTGGCTGTGGGCGTCACTACCAACGACATCCTCTGTCAC
CTCTCCGGCGATGAGGTCTCATACAATCCCGGGAACCGCCTGGCGCGTCT
GGCGGCCCATCTCTTGCAGCAACAGAGTTTCTTCCCCCTTTTCCCGCCAC
CGGCAGATGGGCAAGCGCAGCTGGATCTTCGTCATGCCGATCACTTGCGC
ATGCCCATCACGCCTGATGTCCTCCTCCTCCCTTCTAAGCTCACTCCTTT
CGTGAAGGACGTGGGGGGTGCCCTTTGCATCAATCCCGGCACCCTTACCA
AGGGCGGTGGAGGTGGCACCTACGCGATGCTCCATATTCACCCCTTGCCA
GCTGAGCGTCTGGAGAGAATGTCGCCTGAGACTGAGGTACAGCATGAGGT
AGCGAGGCGAACGCATGCAGAAATTGTCCGCATCTAAAGTTGCCGAGGAT
CGTGATAAAATGACTGATCATAAGACTACAGCCATACAACCATCATCATG
AGAAGACATGGACTTGGTAGGGACGAAGCTTTAGCGTACAAATTGAAACG
CGCATTTTCTTCGAAGATTAAGAAGAACCAGAAGCTCAAATGCTAGTTCA
AAAAAGTACTAATAAGGGAAACGAATATATGTGAGATGAAGAAAAGGATG
GAAATAGCAGGGCATAAATTTTGCTGGTGCTTTTTGTTTGATAACATTTC
TTTTGGTAGCTTGCCAAATCGCGCTTTCTCACATCTTGAAAGCGAGTTGG
TTGGTCAGTACAGACAAAAGAGACCTGTAAAGCGCATGGAAATTAACAAG
AATACACCAAGCTGTGCGG back to topprotein sequence of rna1729 >rna1729-protein ID=rna1729-protein|Name=rna1729|organism=Nannochloropsis gaditana|type=polypeptide|length=197bp
MAYPQAPSRALHVPGAPDRQGGLRRHGRRHQPEVDRVRDAQGGDCPHVSA
PHPHGHSRSRPPHPADVWSPAPLRLPESLRPPPSRRPPLLRPAAPRPPRL
PPLDLPPPLLPPRPLPPPLPHDGGLAGGGCQQHVHQPDGLLRPCLRPSHR
RHLHDLAQHRQQLGLLLGAHSLLGRPGRGHLPLLSRGGRGGRATGCG back to topmRNA from alignment at CM002457.1:1360683..1362093- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1729 ID=rna1729|Name=rna1729|organism=Nannochloropsis gaditana|type=mRNA|length=1411bp|location=Sequence derived from alignment at CM002457.1:1360683..1362093- (Nannochloropsis gaditana)
CTCCCTCCCTCCCTCTCTTTCAGGCCTGGTCACCCTGGGCGGCTTCCTCT
TCTTCTGGGGCTGGGTCTTCCTCAGCACCACCCTCCTCGTGGCCCTCAAG
CCGGAGGAGCGGAAGCGAGAGGAGGAGCCCACCGCCCTCACCCCGAGCGT
CTCCAAGACCTACCAGCAGCTATGGCGTATCCTCAAGGTACCCTCTTTTT
CTTGCAGCGCCTGCCTGAACGTGTCCGCTTGCTCTTCCTTCCCTTGGCGG
TCCACGCTCCTTTTCCCGGGCAGTCGCTTTTGTCGACCTTGGCTTACACG
GCTTTTTGTTTCTTTCGAGCCCCGCATCCTCTTTCCCATGCTCCCATCCA
TCCCCTCACGTGTTTCCTGCCCAACCCTTTCGTCCCTGCAAACGAACCCC
CCCCCTAGCTCCCTCCCGTGCGCTCCATGTGCCTGGTGCTCCTGACCGTC
AAGGCGGGCTTCGCCGTCACGGACGCCGCCACCAACCTGAAGTTGATCGA
GTACGGGATGCCCAAGGAGGAGATTGCCCTCATGTCTCCGCTCCTCATCC
TCACGGGTAGGGCGCCATACCCCCCTCACCCCACCCTTCCTGCCCTTCCC
TTTCTTTCTCTTTCCCCTCCCTCCTTTCCGCCTTCTCCTCCCCCTCCTCT
TCTTGACCCTTCTCCTTCCCCCCCCCCATCCCCCCCCCCAGGCATTCTCG
TTCCCGTCCTCCTCACCCGGCAGACGTCTGGTCCCCGGCCCCTCTCCGTC
TTCCTGAAAGCCTTCGCCCCCCGCCTTCTCGTCGGCCTCCTCTACTTAGG
CCTGCTGCCCCTCGCCCACCGCGCCTACCCCCACTCGACCTCCCTCCCCC
CCTCCTTCCCCCCCGTCCTCTTCCGCCTCCTCTTCCTCACGACGGTGGGC
TTGCGGGAGGTGGCTGCCAACAGCATGTTCATCAGCCAGATGGCCTTCTT
CGCCCGTGTCTCCGACCCAGCCATCGGAGGCACCTACATGACCTTGCTCA
ACACCGTCAGGTAGGGGCCCACCTCCACCAGCCCCCCCCCGGCGTCTTTA
TCTCTCTCCCTTTTTGTATCCCCCTTTCTCCCGCTCTAGCTTTTCTCTTG
CTCTGGATTTCGAGCTTGTCTTCAGATCGGCCCTGGCTCCCCTGACCGCC
GCGTCGCTTCTCTCGCCCTTCCCTCCCCCCTTCCTTTCCCTTCCTTCCCC
TCCTGGCTCTTCTTACCTCACTCCTGGCTCGCCTCCGCCTTTCTCCCTCA
TCCGCCCTCCCTTCCTCTCTCCCTCCCTCCCCCCCTTCCTGCCCCGCTGC
GCAGCAACTTGGGCTCCTCCTGGGTGCGCACAGCCTCCTTGGCCGCCCTG
GACGTGGTCACCTTCCGCTCCTGTCGAGGGGAGGGCGGGGGGGGAGGGCG
ACTGGGTGTGG back to topCoding sequence (CDS) from alignment at CM002457.1:1360683..1362093- >rna1729 ID=rna1729|Name=rna1729|organism=Nannochloropsis gaditana|type=CDS|length=2360bp|location=Sequence derived from alignment at CM002457.1:1360683..1362093- (Nannochloropsis gaditana)
CAACTTGGGCTCCTCCTGGGTGCGCACAGCCTCCTTGGCCGCCCTGGACG
TGGTCACCTTCCGCTCCTGTCGAGGGGAGGGCGGGGGGGGAGGGCGACTG
GGTGTGGGCATTCTCGTTCCCGTCCTCCTCACCCGGCAGACGTCTGGTCC
CCGGCCCCTCTCCGTCTTCCTGAAAGCCTTCGCCCCCCGCCTTCTCGTCG
GCCTCCTCTACTTAGGCCTGCTGCCCCTCGCCCACCGCGCCTACCCCCAC
TCGACCTCCCTCCCCCCCTCCTTCCCCCCCGTCCTCTTCCGCCTCCTCTT
CCTCACGACGGTGGGCTTGCGGGAGGTGGCTGCCAACAGCATGTTCATCA
GCCAGATGGCCTTCTTCGCCCGTGTCTCCGACCCAGCCATCGGAGGCACC
TACATGACCTTGCTCAACACCGTCAGCTCCCTCCCGTGCGCTCCATGTGC
CTGGTGCTCCTGACCGTCAAGGCGGGCTTCGCCGTCACGGACGCCGCCAC
CAACCTGAAGTTGATCGAGTACGGGATGCCCAAGGAGGAGATTGCCCTCA
TGTCTCCGCTCCTCATCCTCACGGATGGCGTATCCTCAAGCAACTTGGGC
TCCTCCTGGGTGCGCACAGCCTCCTTGGCCGCCCTGGACGTGGTCACCTT
CCGCTCCTGTCGAGGGGAGGGCGGGGGGGGAGGGCGACTGGGTGTGGGCA
TTCTCGTTCCCGTCCTCCTCACCCGGCAGACGTCTGGTCCCCGGCCCCTC
TCCGTCTTCCTGAAAGCCTTCGCCCCCCGCCTTCTCGTCGGCCTCCTCTA
CTTAGGCCTGCTGCCCCTCGCCCACCGCGCCTACCCCCACTCGACCTCCC
TCCCCCCCTCCTTCCCCCCCGTCCTCTTCCGCCTCCTCTTCCTCACGACG
GTGGGCTTGCGGGAGGTGGCTGCCAACAGCATGTTCATCAGCCAGATGGC
CTTCTTCGCCCGTGTCTCCGACCCAGCCATCGGAGGCACCTACATGACCT
TGCTCAACACCGTCAGCTCCCTCCCGTGCGCTCCATGTGCCTGGTGCTCC
TGACCGTCAAGGCGGGCTTCGCCGTCACGGACGCCGCCACCAACCTGAAG
TTGATCGAGTACGGGATGCCCAAGGAGGAGATTGCCCTCATGTCTCCGCT
CCTCATCCTCACGGATGGCGTATCCTCAAGCAACTTGGGCTCCTCCTGGG
TGCGCACAGCCTCCTTGGCCGCCCTGGACGTGGTCACCTTCCGCTCCTGT
CGAGGGGAGGGCGGGGGGGGAGGGCGACTGGGTGTGGGCATTCTCGTTCC
CGTCCTCCTCACCCGGCAGACGTCTGGTCCCCGGCCCCTCTCCGTCTTCC
TGAAAGCCTTCGCCCCCCGCCTTCTCGTCGGCCTCCTCTACTTAGGCCTG
CTGCCCCTCGCCCACCGCGCCTACCCCCACTCGACCTCCCTCCCCCCCTC
CTTCCCCCCCGTCCTCTTCCGCCTCCTCTTCCTCACGACGGTGGGCTTGC
GGGAGGTGGCTGCCAACAGCATGTTCATCAGCCAGATGGCCTTCTTCGCC
CGTGTCTCCGACCCAGCCATCGGAGGCACCTACATGACCTTGCTCAACAC
CGTCAGCTCCCTCCCGTGCGCTCCATGTGCCTGGTGCTCCTGACCGTCAA
GGCGGGCTTCGCCGTCACGGACGCCGCCACCAACCTGAAGTTGATCGAGT
ACGGGATGCCCAAGGAGGAGATTGCCCTCATGTCTCCGCTCCTCATCCTC
ACGGATGGCGTATCCTCAAGCAACTTGGGCTCCTCCTGGGTGCGCACAGC
CTCCTTGGCCGCCCTGGACGTGGTCACCTTCCGCTCCTGTCGAGGGGAGG
GCGGGGGGGGAGGGCGACTGGGTGTGGGCATTCTCGTTCCCGTCCTCCTC
ACCCGGCAGACGTCTGGTCCCCGGCCCCTCTCCGTCTTCCTGAAAGCCTT
CGCCCCCCGCCTTCTCGTCGGCCTCCTCTACTTAGGCCTGCTGCCCCTCG
CCCACCGCGCCTACCCCCACTCGACCTCCCTCCCCCCCTCCTTCCCCCCC
GTCCTCTTCCGCCTCCTCTTCCTCACGACGGTGGGCTTGCGGGAGGTGGC
TGCCAACAGCATGTTCATCAGCCAGATGGCCTTCTTCGCCCGTGTCTCCG
ACCCAGCCATCGGAGGCACCTACATGACCTTGCTCAACACCGTCAGCTCC
CTCCCGTGCGCTCCATGTGCCTGGTGCTCCTGACCGTCAAGGCGGGCTTC
GCCGTCACGGACGCCGCCACCAACCTGAAGTTGATCGAGTACGGGATGCC
CAAGGAGGAGATTGCCCTCATGTCTCCGCTCCTCATCCTCACGGATGGCG
TATCCTCAAG back to top
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