EWM28948.1, cds1725 (CDS) Nannochloropsis gaditana

Overview
NameEWM28948.1
Unique Namecds1725
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1361907..1361922 -
Alignment locationCM002457.1:1361538..1361685 -
Alignment locationCM002457.1:1361084..1361402 -
Alignment locationCM002457.1:1360683..1360789 -

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Properties
Property NameValue
Start range1360683
Start range.
Protein idEWM28948.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101890g1.104.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1361907..1361922 -
CM002457.1supercontigCM002457.1:1361538..1361685 -
CM002457.1supercontigCM002457.1:1361084..1361402 -
CM002457.1supercontigCM002457.1:1360683..1360789 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28948.1 vs. NCBI_GenBank
Match: gi|585111421|gb|EWM28948.1| (hypothetical protein Naga_101890g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 355.14 bits (910), Expect = 2.689e-123
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 
Query:    1 MAYPQAPSRALHVPGAPDRQGGLRRHGRRHQPEVDRVRDAQGGDCPHVSAPHPHGHSRSRPPHPADVWSPAPLRLPESLRPPPSRRPPLLRPAAPRPPRLPPLDLPPPLLPPRPLPPPLPHDGGLAGGGCQQHVHQPDGLLRPCLRPSHRRHLHDLAQHRQQLGLLLGAHSLLGRPGRGHLPLLSRGGRGGRATGCG 197
            MAYPQAPSRALHVPGAPDRQGGLRRHGRRHQPEVDRVRDAQGGDCPHVSAPHPHGHSRSRPPHPADVWSPAPLRLPESLRPPPSRRPPLLRPAAPRPPRLPPLDLPPPLLPPRPLPPPLPHDGGLAGGGCQQHVHQPDGLLRPCLRPSHRRHLHDLAQHRQQLGLLLGAHSLLGRPGRGHLPLLSRGGRGGRATGCG
Sbjct:    1 MAYPQAPSRALHVPGAPDRQGGLRRHGRRHQPEVDRVRDAQGGDCPHVSAPHPHGHSRSRPPHPADVWSPAPLRLPESLRPPPSRRPPLLRPAAPRPPRLPPLDLPPPLLPPRPLPPPLPHDGGLAGGGCQQHVHQPDGLLRPCLRPSHRRHLHDLAQHRQQLGLLLGAHSLLGRPGRGHLPLLSRGGRGGRATGCG 197
The following BLAST results are available for this feature:
BLAST of EWM28948.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111421|gb|EWM28948.1|2.689e-123100.00hypothetical protein Naga_101890g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1729rna1729Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications