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Properties
| Property Name | Value |
|---|
| Product | Leucine-rich repeat, typical subtype |
| Orig transcript id | gnl|cribi|Naga_100694g1.7971.mrna |
| Orig protein id | gnl|cribi|Naga_100694g1.7971 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1313923..1314511 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1715 ID=rna1715|Name=rna1715|organism=Nannochloropsis gaditana|type=mRNA|length=366bp
ATGAAAAGGGACGAAGCGATCTTCTCTGCCCTTTCCGAGAAGAAAGCGTG
CTTAGAAACTAATCTAGCACAGGCAAAGTCAGAATTAGAGGCGAAACAGG
CGATGTTGGACGATCAGAAAAAGGCAATTGCAGCCCTCGAGCAGGCAGAA
AAACAAAAAAGGGACGCTTCTGAGAAGGAACAGCAGTTCATCCAGGAGGC
GGTGGATCGGGCCCTGGAGCAGGCCGAGATGGAGCACACGAGGCAGTTGG
AGGCGAAAGAAAAGTCCCTACGCTTCCTGCAAGACGAGTTGACCGCACAG
GCCGCTGTGTTTGAGCGACGGCGAGCCGAGTCCGAGATGAAGGCACGAGA
GGAGAAGGACGGGTAA back to topprotein sequence of rna1715 >rna1715-protein ID=rna1715-protein|Name=rna1715|organism=Nannochloropsis gaditana|type=polypeptide|length=112bp
MPSLAHLDLSCNQITALDTTFPYLPSLQILLVPFNRIEDLEGWGQYGSCL
LPALRTLDLRDNLLSHHLPPFLPANGNPVCARPGYVSVTAALFRELKRLD
GLDLGKCEGSSR back to topmRNA from alignment at CM002457.1:1313923..1314511- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1715 ID=rna1715|Name=rna1715|organism=Nannochloropsis gaditana|type=mRNA|length=589bp|location=Sequence derived from alignment at CM002457.1:1313923..1314511- (Nannochloropsis gaditana)
ATGCCGAGCCTCGCCCATCTCGACCTTTCATGCAACCAAATTACGGCATT
GGACACTACTTTCCCTTACCTCCCCTCTCTCCAAATACTATTGGTTCCTT
TCAACCGTATCGAAGACCTAGAGGGCTGGGGTCAGTACGGATCGTGCCTG
TTGCCCGGTGGGTGAACAAGCCTTCCAAGGGAAGGGGAGGAAAGACTGGG
GGAGAATGCTGTTACTTCTTTTCACAATTCGCTCCATCAGACGCGTTGCC
CCCGCGACTGAACTGGTATTTCCCCTCTTTCCCCCCGCAGCCTTGCGCAC
GCTCGACCTGCGAGACAACCTCCTCTCCCACCACCTGCCACCCTTCCTCC
CTGCCAACGTCTGTCCTCTGCTGACCGCCCTCCTTCTCCAAGCCTGGCGC
CCCTCTTCCCCCTCCTCCTCCCTTCCTTCCTCCTCCCCTTCCTCCTCCCT
TCCTTCCTTCCCTGCTTTCGTGCAGGGCAATCCTGTCTGTGCGAGGCCCG
GCTACGTCTCTGTCACGGCAGCTTTGTTCAGGGAGCTGAAGAGGCTCGAC
GGTCTGGACTTAGGTAAGTGCGAGGGAAGCAGCCGGTAA back to topCoding sequence (CDS) from alignment at CM002457.1:1313923..1314511- >rna1715 ID=rna1715|Name=rna1715|organism=Nannochloropsis gaditana|type=CDS|length=1017bp|location=Sequence derived from alignment at CM002457.1:1313923..1314511- (Nannochloropsis gaditana)
GGCAATCCTGTCTGTGCGAGGCCCGGCTACGTCTCTGTCACGGCAGCTTT
GTTCAGGGAGCTGAAGAGGCTCGACGGTCTGGACTTAGGTAAGTGCGAGG
GAAGCAGCCGGTAACCTTGCGCACGCTCGACCTGCGAGACAACCTCCTCT
CCCACCACCTGCCACCCTTCCTCCCTGCCAACATGCCGAGCCTCGCCCAT
CTCGACCTTTCATGCAACCAAATTACGGCATTGGACACTACTTTCCCTTA
CCTCCCCTCTCTCCAAATACTATTGGTTCCTTTCAACCGTATCGAAGACC
TAGAGGGCTGGGGTCAGTACGGATCGTGCCTGTTGCCCGGGCAATCCTGT
CTGTGCGAGGCCCGGCTACGTCTCTGTCACGGCAGCTTTGTTCAGGGAGC
TGAAGAGGCTCGACGGTCTGGACTTAGGTAAGTGCGAGGGAAGCAGCCGG
TAACCTTGCGCACGCTCGACCTGCGAGACAACCTCCTCTCCCACCACCTG
CCACCCTTCCTCCCTGCCAACATGCCGAGCCTCGCCCATCTCGACCTTTC
ATGCAACCAAATTACGGCATTGGACACTACTTTCCCTTACCTCCCCTCTC
TCCAAATACTATTGGTTCCTTTCAACCGTATCGAAGACCTAGAGGGCTGG
GGTCAGTACGGATCGTGCCTGTTGCCCGGGCAATCCTGTCTGTGCGAGGC
CCGGCTACGTCTCTGTCACGGCAGCTTTGTTCAGGGAGCTGAAGAGGCTC
GACGGTCTGGACTTAGGTAAGTGCGAGGGAAGCAGCCGGTAACCTTGCGC
ACGCTCGACCTGCGAGACAACCTCCTCTCCCACCACCTGCCACCCTTCCT
CCCTGCCAACATGCCGAGCCTCGCCCATCTCGACCTTTCATGCAACCAAA
TTACGGCATTGGACACTACTTTCCCTTACCTCCCCTCTCTCCAAATACTA
TTGGTTCCTTTCAACCGTATCGAAGACCTAGAGGGCTGGGGTCAGTACGG
ATCGTGCCTGTTGCCCG back to top
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