EWM28961.1, cds1711 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28961.1 vs. NCBI_GenBank
Match: gi|585111441|gb|EWM28961.1| (Leucine-rich repeat, typical subtype [Nannochloropsis gaditana]) HSP 1 Score: 228.024 bits (580), Expect = 1.106e-75 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
Query: 1 MPSLAHLDLSCNQITALDTTFPYLPSLQILLVPFNRIEDLEGWGQYGSCLLPALRTLDLRDNLLSHHLPPFLPANGNPVCARPGYVSVTAALFRELKRLDGLDLGKCEGSSR 112
MPSLAHLDLSCNQITALDTTFPYLPSLQILLVPFNRIEDLEGWGQYGSCLLPALRTLDLRDNLLSHHLPPFLPANGNPVCARPGYVSVTAALFRELKRLDGLDLGKCEGSSR
Sbjct: 1 MPSLAHLDLSCNQITALDTTFPYLPSLQILLVPFNRIEDLEGWGQYGSCLLPALRTLDLRDNLLSHHLPPFLPANGNPVCARPGYVSVTAALFRELKRLDGLDLGKCEGSSR 112
BLAST of EWM28961.1 vs. NCBI_GenBank
Match: gi|955170415|emb|CUG87119.1| (leucine-rich repeat protein, putative, partial [Bodo saltans]) HSP 1 Score: 56.225 bits (134), Expect = 3.410e-7 Identity = 35/101 (34.65%), Postives = 55/101 (54.46%), Query Frame = 0
Query: 1 MPSLAHLDLSCNQITALDTTFPYLPSLQILLVPFNRIEDLEGWGQYGSCLLPALRTLDLRDNLLSHHLPPFLPANGNPVCARPGYVSVTAALFRELKRLDG 101
+ +L +LDLS NQ+T++ + PSL++L + N I +E G + S ++P LR L L+D P P+ G R YV+ AA F+ ++ LDG
Sbjct: 70 LNALVYLDLSFNQLTSVHELSKWCPSLEVLHLEGNCIASMEAIGCFDSAVMPKLRALYLQDRDGEFANPVCCPSGG-----REEYVAFAAAHFQHIRCLDG 165 The following BLAST results are available for this feature:
BLAST of EWM28961.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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