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Properties
| Property Name | Value |
|---|
| Product | glutamate-rich wd repeat containing 1 |
| Orig transcript id | gnl|cribi|Naga_101324g1.9876.mrna |
| Orig protein id | gnl|cribi|Naga_101324g1.9876 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1295397..1296869 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1706 ID=rna1706|Name=rna1706|organism=Nannochloropsis gaditana|type=mRNA|length=2145bp
GCTGCTGTCAGCAAGCGAGGCAAGTTTGCCATCCACGAGACGATGCTGGG
TGTCCCATGCGTCCTGGTACGGAGTGAGACGATCTGACCAGTCGTGAAGC
AGGACAGGGTCCCGTGCATGGGAGGGAAGGGGGCTGAATGAAAGGGCATC
GGAGAGACGAGTGGACGGAGGAGGAGGTATGGTTGGGAAGGCATTGATGA
AAAGAATCTGGGAAAACAGGATCAATAACCAACAGGAATGAGCAGGTAGA
CGTGATGATAACCATAAAATATTTTTCGAATGCGTGCCTGTCCGTTGGCG
TATCATGCCCTCCTGTTATCGTGAAAAAGAGGAATATGGTGTCAGGAGAT
TACATTAGCATGAGCAATAAAACTTGTGAAATAGATAATACTTGATTTGA
TTGGCCTGGAGAGTATCTGTGATATTCAAGCCCGGCAATAATGTTTGGAA
AATAGTGAAAAATAGGGCTGGGCGGAGCGTACTTTGACACCCACAGATAT
CATTTTGGCCTGCGCTGACAGGGGATAGGAATAAAAGTAGCATGACACAT
TAGCTTGACTTAATGGGAGGTTCGCGCTCGACACCTATATTTTTTCTATC
TAAATTTCGAGGACTTAATTGAGCGGGCGAGGTTGTACAGCAGGAGATAA
GCACAGGAGGCAAGAGGCGTGCTCAAGTGAAAGACTGTGGACGGGACATA
TTTCCTCTTGCTCCCTCACTTCCATCACCCCCGCCGGCAAATTCGGTCAT
ATAATTGCGCTCACACATATACCTCGAAACCCATCTATCACACGTCCGTC
GCAGCAGCCGCGTGAATAGCCCCTTTGCGGAGCGTGGTATGGAAAGCGCT
TCCCTCTTCGTTTTTCCAAAACCCACATGATGACGCTGTCCCGGCTCTAT
TTTTCCACCACGGCCATCGCCATACTTTGCATGTACTCCATTATCCTCCC
CACCTCCTCCGCTTTCCTTCTCCGCGCCCGTCCTTTTCCTTCCCCCGCCG
CGACCTCCACCTGGTCCCGGTGCTTTTTGTCATCCTCCTCCACGCCGGCA
GCGCCCAAGAAAGTGCTCGTGCCGGTGGCCGACGGCTCGGAAGAAATTGA
GTCGGTGACGATCATCGACGTCCTTGTCCGGGCCGGGGCCGCCGTGACCG
TGGCCTCTGTCATGCCCTCCGCCTCGACTGCCACTTTGCCCAGCTCGTGG
CAGGTGACGTGCTCTCGTGGCGTGAAGCTCGTGGCGGACAAGGGCATCGA
CGACTGCCTGGGGGAGGAATGGGATTTGATCGCCTGCCCAGGCGGACTGC
CGGGGGCGGAACATTTGCGGGATTCCCCCGCCCTTTTGACGCTGTTGCAA
CGTCAAGATAAAGCCCAACGCCTTGTGGCTGCCATCTGCGCCTCGCCCGC
GGTGGTTTTACACACCCATGGCTTCTTGACAGGGAAACGCGCCACGTGTT
TCCCGGCGGAACGCTTCGTGTCGAGCCTGGCTCGCTACGAGGACGGGGAG
GAGGGCGTGGTGGAGGACGGGCATGTGGTCACGAGCCGTGGCCCGGGGAC
GACGCTTCGCTTCGCCTTGACCTTAGTCGATCGCTTGTGCGGACGGGCGA
AGGCAGAGGAGGTGGCGAAAGGCTTGTTGGTAGACTATCCGGGAAAGGGG
AACTAGGGCAAGGGGGCGAATGGGGGAGATGGACGGGATGTTTCGGGGCA
CAGGAGAGGGAGAGGGGTGAGGCGAAGAGAGAGAGGTAGTGGTGCGGTTC
AGGAGGTAGGAAGGGTGGGGCTTCCACACGCATTCAGAAGGGAAACCGTG
GGTGTCGGAAGGAAAAGGTTTAAGGGGGTGGACGGTGAGAGGCTGGCATG
CCCAGGTCGACAAGGAGGGGCAGGGGGGGAGGGGTGGGGGTAAGGAGGAA
AAGGCACCGTGAGGTCCGTCGAGGGAGTGCACCCAAGCCAGCCGGAACGT
CCCCTGTGAGAGCAAAAAGAGATCAAGGGGCAGAGGGAAAGGAGCCGGAC
GTGGGACCAAGGAGGGGAAGCAGGAGGGTCAGGAATTCCACGTGTATGGC
CGTGCGTGCCTGCGAACAGCTGGTAGAAAATAGAGCCAACGTGGAAAAGA
AATTTTCACGCGCTTGGAAAACCCAGAGCCACAACGCGCATCTCA back to topprotein sequence of rna1706 >rna1706-protein ID=rna1706-protein|Name=rna1706|organism=Nannochloropsis gaditana|type=polypeptide|length=241bp
MVKLSRSSKRVTTQSEKGGREIGKTGGEGGKRSRGGDSTEDVLARGGQGG
GRGREGEEKKETKDNLRFEDPYEDEFEEEEEMEEVVELDSDEEEGMDLEA
FRAGRAGRALGEDDMETEEAATSAVPKVYCPGMEHELKEGEELVYDPSAY
LMYHRLTPEWPCLSFDILQDTLGGGRTRFPITMYAACGTQADVAGKNKLT
VMKLTNMTKTYRRGGQESDSEEEEEDEEEEGMEGRSALGAV back to topmRNA from alignment at CM002457.1:1295397..1296869- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1706 ID=rna1706|Name=rna1706|organism=Nannochloropsis gaditana|type=mRNA|length=1473bp|location=Sequence derived from alignment at CM002457.1:1295397..1296869- (Nannochloropsis gaditana)
GTACGCGATCTCTGTGCGAAATTTCTTATCTTTTGTTTTTCTCCCCTCTT
TTTCATTTTAATGTGTTCGTGTTGACTGGTGGTGATGGGAAAGTATCCTA
CCCTCCGTCCTACCCGTGTATATTTTTTCAAACAGGTTCATCGATGGTCA
AACTTAGCAGAAGCAGCAAAAGGGTGACGACGCAGTCTGAGAAAGGAGGC
AGAGAAATTGGAAAAACAGGAGGAGAGGGGGGAAAGCGCAGTCGTGGTGG
GGATAGCACGGAGGATGTGTTGGCAAGGGGAGGACAAGGAGGAGGGCGGG
GAAGAGAAGGAGAGGAGAAGAAAGAAACCAAGGATAATTTACGGTTCGAA
GATCCATACGAAGATGAGTTTGAGGAGGAGGAGGAGATGGAGGAGGTAGT
GGAGCTTGATTCGGACGAGGAGGAGGGTATGGACTTGGAAGCGTTCAGAG
CAGGTCGTGCAGGTAGGAAAGGTGTCAGGCTAGGGGTAACGGGAGAGACG
AATGCGGGCGAAAAGGGGGGTGGATAAGATTAGCACGGTGTGGTATTTTT
CATTTTTCGTTCTCGCTCCCTCTGGCGCCGCCCCTCGTCTTGCCTTTCTT
CCTTTTGCCCTCTAATTATTTCCTTCCTTCCCCTTCCTTCGTTCTATCAA
ATATCTTTCTCAGGCCGGGCGCTCGGCGAGGATGACATGGAGACGGAAGA
GGCGGCCACCAGTGCGGTCCCCAAAGTGTATTGCCCGGGCATGGAACACG
AATTGAAGGAGGGGGAGGAATTAGTGTATGACCCGAGTGCTTACCTCATG
TAAGTAGGGAGGGGGAAAGGGCAGGGAGATAGGGAGGAATGGATAGAGAT
AGAGATAGGGGTCTCTGGGAGGGATCAGTGTCGGCCTTGGTTTTGGATGA
AAGGTGGCACAGACGGCAAGAGAGGTAAATTCCTCCTCGAGCGCCATCAC
TCACTCCTTCCCCCCGCGGTGTTTCTCGGCAGGTACCATCGGCTGACGCC
CGAATGGCCATGTCTGAGTTTTGATATACTCCAGGACACCTTGGGGGGCG
GGCGCACGCGGTAAGCAGTGAAGAAGGGAGGGAGGGAGGGAGGGAAGCGG
GGCGAGGTGGAGGAAGGGAAGGAGGAGAATCAACGGAGGAAAAGAGAAAT
TCCGGCGCAGTTTTCGCCTCTCACTCCCCTTCCCTCCCTCCCTTTCTCCC
TCCCTCCCTCAGGTTCCCCATCACCATGTATGCGGCCTGCGGGACCCAAG
CCGACGTCGCGGGGAAGAACAAGCTGACGGTGATGAAGCTGACGAATATG
ACCAAGACCTACCGGAGAGGCGGACAGGAGAGCGACAGCGAGGAGGAGGA
GGAGGACGAGGAGGAGGAAGGGATGGAGGGTAGATCCGCTCTTGGAGCAG
TGTAGCATCGAGCATCGGGGAGGGTGCGTGAGGAAGGGGGGCGGGAGGAG
GGAGGGAGGGAGGGAGGGAGGGG back to topCoding sequence (CDS) from alignment at CM002457.1:1295397..1296869- >rna1706 ID=rna1706|Name=rna1706|organism=Nannochloropsis gaditana|type=CDS|length=2904bp|location=Sequence derived from alignment at CM002457.1:1295397..1296869- (Nannochloropsis gaditana)
GTTCCCCATCACCATGTATGCGGCCTGCGGGACCCAAGCCGACGTCGCGG
GGAAGAACAAGCTGACGGTGATGAAGCTGACGAATATGACCAAGACCTAC
CGGAGAGGCGGACAGGAGAGCGACAGCGAGGAGGAGGAGGAGGACGAGGA
GGAGGAAGGGATGGAGGGTAGATCCGCTCTTGGAGCAGTGTAGGTACCAT
CGGCTGACGCCCGAATGGCCATGTCTGAGTTTTGATATACTCCAGGACAC
CTTGGGGGGCGGGCGCACGCGGCCGGGCGCTCGGCGAGGATGACATGGAG
ACGGAAGAGGCGGCCACCAGTGCGGTCCCCAAAGTGTATTGCCCGGGCAT
GGAACACGAATTGAAGGAGGGGGAGGAATTAGTGTATGACCCGAGTGCTT
ACCTCATATGGTCAAACTTAGCAGAAGCAGCAAAAGGGTGACGACGCAGT
CTGAGAAAGGAGGCAGAGAAATTGGAAAAACAGGAGGAGAGGGGGGAAAG
CGCAGTCGTGGTGGGGATAGCACGGAGGATGTGTTGGCAAGGGGAGGACA
AGGAGGAGGGCGGGGAAGAGAAGGAGAGGAGAAGAAAGAAACCAAGGATA
ATTTACGGTTCGAAGATCCATACGAAGATGAGTTTGAGGAGGAGGAGGAG
ATGGAGGAGGTAGTGGAGCTTGATTCGGACGAGGAGGAGGGTATGGACTT
GGAAGCGTTCAGAGCAGGTCGTGCAGGTTCCCCATCACCATGTATGCGGC
CTGCGGGACCCAAGCCGACGTCGCGGGGAAGAACAAGCTGACGGTGATGA
AGCTGACGAATATGACCAAGACCTACCGGAGAGGCGGACAGGAGAGCGAC
AGCGAGGAGGAGGAGGAGGACGAGGAGGAGGAAGGGATGGAGGGTAGATC
CGCTCTTGGAGCAGTGTAGGTACCATCGGCTGACGCCCGAATGGCCATGT
CTGAGTTTTGATATACTCCAGGACACCTTGGGGGGCGGGCGCACGCGGCC
GGGCGCTCGGCGAGGATGACATGGAGACGGAAGAGGCGGCCACCAGTGCG
GTCCCCAAAGTGTATTGCCCGGGCATGGAACACGAATTGAAGGAGGGGGA
GGAATTAGTGTATGACCCGAGTGCTTACCTCATATGGTCAAACTTAGCAG
AAGCAGCAAAAGGGTGACGACGCAGTCTGAGAAAGGAGGCAGAGAAATTG
GAAAAACAGGAGGAGAGGGGGGAAAGCGCAGTCGTGGTGGGGATAGCACG
GAGGATGTGTTGGCAAGGGGAGGACAAGGAGGAGGGCGGGGAAGAGAAGG
AGAGGAGAAGAAAGAAACCAAGGATAATTTACGGTTCGAAGATCCATACG
AAGATGAGTTTGAGGAGGAGGAGGAGATGGAGGAGGTAGTGGAGCTTGAT
TCGGACGAGGAGGAGGGTATGGACTTGGAAGCGTTCAGAGCAGGTCGTGC
AGGTTCCCCATCACCATGTATGCGGCCTGCGGGACCCAAGCCGACGTCGC
GGGGAAGAACAAGCTGACGGTGATGAAGCTGACGAATATGACCAAGACCT
ACCGGAGAGGCGGACAGGAGAGCGACAGCGAGGAGGAGGAGGAGGACGAG
GAGGAGGAAGGGATGGAGGGTAGATCCGCTCTTGGAGCAGTGTAGGTACC
ATCGGCTGACGCCCGAATGGCCATGTCTGAGTTTTGATATACTCCAGGAC
ACCTTGGGGGGCGGGCGCACGCGGCCGGGCGCTCGGCGAGGATGACATGG
AGACGGAAGAGGCGGCCACCAGTGCGGTCCCCAAAGTGTATTGCCCGGGC
ATGGAACACGAATTGAAGGAGGGGGAGGAATTAGTGTATGACCCGAGTGC
TTACCTCATATGGTCAAACTTAGCAGAAGCAGCAAAAGGGTGACGACGCA
GTCTGAGAAAGGAGGCAGAGAAATTGGAAAAACAGGAGGAGAGGGGGGAA
AGCGCAGTCGTGGTGGGGATAGCACGGAGGATGTGTTGGCAAGGGGAGGA
CAAGGAGGAGGGCGGGGAAGAGAAGGAGAGGAGAAGAAAGAAACCAAGGA
TAATTTACGGTTCGAAGATCCATACGAAGATGAGTTTGAGGAGGAGGAGG
AGATGGAGGAGGTAGTGGAGCTTGATTCGGACGAGGAGGAGGGTATGGAC
TTGGAAGCGTTCAGAGCAGGTCGTGCAGGTTCCCCATCACCATGTATGCG
GCCTGCGGGACCCAAGCCGACGTCGCGGGGAAGAACAAGCTGACGGTGAT
GAAGCTGACGAATATGACCAAGACCTACCGGAGAGGCGGACAGGAGAGCG
ACAGCGAGGAGGAGGAGGAGGACGAGGAGGAGGAAGGGATGGAGGGTAGA
TCCGCTCTTGGAGCAGTGTAGGTACCATCGGCTGACGCCCGAATGGCCAT
GTCTGAGTTTTGATATACTCCAGGACACCTTGGGGGGCGGGCGCACGCGG
CCGGGCGCTCGGCGAGGATGACATGGAGACGGAAGAGGCGGCCACCAGTG
CGGTCCCCAAAGTGTATTGCCCGGGCATGGAACACGAATTGAAGGAGGGG
GAGGAATTAGTGTATGACCCGAGTGCTTACCTCATATGGTCAAACTTAGC
AGAAGCAGCAAAAGGGTGACGACGCAGTCTGAGAAAGGAGGCAGAGAAAT
TGGAAAAACAGGAGGAGAGGGGGGAAAGCGCAGTCGTGGTGGGGATAGCA
CGGAGGATGTGTTGGCAAGGGGAGGACAAGGAGGAGGGCGGGGAAGAGAA
GGAGAGGAGAAGAAAGAAACCAAGGATAATTTACGGTTCGAAGATCCATA
CGAAGATGAGTTTGAGGAGGAGGAGGAGATGGAGGAGGTAGTGGAGCTTG
ATTCGGACGAGGAGGAGGGTATGGACTTGGAAGCGTTCAGAGCAGGTCGT
GCAG back to top
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