rna1697, rna1697 (mRNA) Nannochloropsis gaditana

Overview
Namerna1697
Unique Namerna1697
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length987
Alignment locationCM002457.1:1277230..1278213 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100737g1.3612.mrna
Orig protein idgnl|cribi|Naga_100737g1.3612
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1277230..1278213 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100737g1gene1634Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1697rna1697-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28980.1cds1693Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1697 ID=rna1697|Name=rna1697|organism=Nannochloropsis gaditana|type=mRNA|length=987bp
CGTCGTTTCGCTGCGTCCTCACAAATGTTTTCACTTTTGTCATAAAGGGG
ACGAAAGCAATTGCATAATGGATCAGCTGGGAGACTTGGATCATGAAAAA
CTCATCACGGCGGGCTTGGTCACGCAGGGGGTCTTTGTCCTCTGCTACAC
CATTTGCTCCTTCGTCGTCGCCAGCACCGCCAACATGGGATTCAATGCCG
TGCTGACAGCGCTGCTCTATATATTCTACGTGGCGGGCACTTACCATGTC
CTTCAGCGGTCGAAAATGCCATTGGCGGTGGGATTCGTGTTGGGCGTCTC
GGTCATGATCACCTTCCTCTCGCTTATGACGGCCATTTTCTGGGGTCAAC
TCGCGAACTGCTCCCCTGGCTACTACGATATCAAGAGATACTCGTGCACG
AACCGTAGCGCCTACAGTGCCACCTGCGCCTTCGCAACCCTGCTCTTCCT
TGTTCAGCTTGTTTTCACGTCAGCCTTAGTCCTCTGGCGGGACGAGTTCA
TTCAAGACAGCAGCGCCTACGATGACATTCATGGGGCCGGTGGTGCGAGC
AGTAGCAGTGCCGCTGGCCTCCCTGGATACGAGGGGGGGACTCAACAGCC
TTCTTACAACCAGTCGAGCACAGCAGATTTATGAGGCGTAGGGAGATGAG
GCGCGGGAGGGAGGGGCTCTCCGGGGGCGGGGGGGGGGAAGGAGATGTGT
ATGTAATACGCAAGATGTGGACGCGGATGCGCGTTTCTAAGAGTGATGTC
TGAAGGAGTGAATGTGACGACGAGAAAAAAAGCATACAAATGCGCCGCGA
ACACAATATTCCAATCAGCAATTGATTGCCCTTATTGCGATCACCACATT
TAAATTTCTTCTTGTCTGCATGCCTGTCCAAGGAAGGCGGTGAGTATGAC
TGGCAGAGATCCTAGTATTCCATAAGAGTCGAAGGAATGGTGCGGGTGGC
TGAAAAATAACAGTAGACGTGTTTTTGCGAGGCCATA
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protein sequence of rna1697

>rna1697-protein ID=rna1697-protein|Name=rna1697|organism=Nannochloropsis gaditana|type=polypeptide|length=76bp
MPRWMEICSWPTSPYQRVNCPLRSPGYSHATDRIQPLYRQDITGSTARAI
STRCTWTPARRPPITRVNSCRHRFCR
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mRNA from alignment at CM002457.1:1277230..1278213+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1697 ID=rna1697|Name=rna1697|organism=Nannochloropsis gaditana|type=mRNA|length=984bp|location=Sequence derived from alignment at CM002457.1:1277230..1278213+ (Nannochloropsis gaditana)
TGTATTTAAATAATATCAGGGCGTTTCGAACCCTTTTCGGTGCCAGATAG
CTCCAGGGACACAATGTGACGGTTCCTTGCCTCGTCCTGTCTCGTTCTTT
GTTTCGCTTGGACTCACGTCTCCTCATACATGTATCGTGTTGTAGATCAT
TCATGGGAAGTATTTGGCCACTCGTACGCAGTGCGTTGGGGGCACTTTTG
TCCGTGACTGAGTCCGGAGTATTCTGGCTGCAAGGATCAGAAACGGTACG
TCGATATTTCAGTAAAAGCATTCAAGGTAGTGGGAGGAATGGACAGAGAG
ACAAAGTTGCGGGCTTAGTTTTCCTGATTTATGCGAGGGCCAGCACTCAC
CTACCACATCCCCCCTTACACAGATACCACGGGGTGAGAACAATCGTTTC
TTGTGGGGGAATTATGCCCCGGTGGATGGAGATCTGTTCGTGGCCAACAT
CCCCGTATCAGAGGGTAAATTGCCCCCTGAGATCACCGGGTTATTCGCAC
GCAACGGACCGAATCCAGCCTTTATATCGGCAGGATATCACTGGTAGGCA
ACGGTCAAGGGCTTAGCGTAACAGGGGATAGGTTCACAGGAAAGGATGGC
AAGAAGTCTCTCTTTGTGGGAGACATGCGtcgagagaaggaaggaaggag
gacgggttcTGGTCAAGAATAGGAGGGAACAGCTTGGCGAGGAAGggtac
atatatatatatatatagctATAGATAGATATGTTGTTGCATACCGTCGT
AGTCCTATGGAGGGATACTCTCGGATGGGATAcccgcctgctccgcccCC
GGGGGACAAAACGGGCCTGGGTGAGGGTGCTCCGTGACGTTGACACGCCG
TTTTCCTCTGGATCGACCTTTCCTGTGGTAGGTTCGACGGCTCGGGCTAT
ATCCACGCGGTGCACGTGGACGCCGGCACGCAGACCGCCAATTACTCGGG
TCAATTCGTGCAGACACCGATTCTgcaggtagga
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Coding sequence (CDS) from alignment at CM002457.1:1277230..1278213+

>rna1697 ID=rna1697|Name=rna1697|organism=Nannochloropsis gaditana|type=CDS|length=462bp|location=Sequence derived from alignment at CM002457.1:1277230..1278213+ (Nannochloropsis gaditana)
ATGCCCCGGTGGATGGAGATCTGTTCGTGGCCAACATCCCCGTATCAGAG
GGTAAATTGCCCCCTGAGATCACCGGGTTATTCGCACGCAACGGACCGAA
TCCAGCCTTTATATCGGCAGGATATCACTGGTTCGACGGCTCGGGCTATA
TCCACGCGGTGCACGTGGACGCCGGCACGCAGACCGCCAATTACTCGGGT
CAATTCGTGCAGACACCGATTCTgcaggtagATGCCCCGGTGGATGGAGA
TCTGTTCGTGGCCAACATCCCCGTATCAGAGGGTAAATTGCCCCCTGAGA
TCACCGGGTTATTCGCACGCAACGGACCGAATCCAGCCTTTATATCGGCA
GGATATCACTGGTTCGACGGCTCGGGCTATATCCACGCGGTGCACGTGGA
CGCCGGCACGCAGACCGCCAATTACTCGGGTCAATTCGTGCAGACACCGA
TTCTgcaggtag
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Synonyms
Publications