EWM28980.1, cds1693 (CDS) Nannochloropsis gaditana

Overview
NameEWM28980.1
Unique Namecds1693
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1277643..1277772 +
Alignment locationCM002457.1:1278111..1278211 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28980.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100737g1.3612.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1277643..1277772 +
CM002457.1supercontigCM002457.1:1278111..1278211 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28980.1 vs. NCBI_GenBank
Match: gi|585111474|gb|EWM28980.1| (hypothetical protein Naga_100737g1 [Nannochloropsis gaditana])

HSP 1 Score: 155.221 bits (391), Expect = 4.970e-48
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 
Query:    1 MPRWMEICSWPTSPYQRVNCPLRSPGYSHATDRIQPLYRQDITGSTARAISTRCTWTPARRPPITRVNSCRHRFCR 76
            MPRWMEICSWPTSPYQRVNCPLRSPGYSHATDRIQPLYRQDITGSTARAISTRCTWTPARRPPITRVNSCRHRFCR
Sbjct:    1 MPRWMEICSWPTSPYQRVNCPLRSPGYSHATDRIQPLYRQDITGSTARAISTRCTWTPARRPPITRVNSCRHRFCR 76
The following BLAST results are available for this feature:
BLAST of EWM28980.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111474|gb|EWM28980.1|4.970e-48100.00hypothetical protein Naga_100737g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1697rna1697Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications