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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100373g1.5927.mrna |
| Orig protein id | gnl|cribi|Naga_100373g1.5927 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1250710..1251410 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1682 ID=rna1682|Name=rna1682|organism=Nannochloropsis gaditana|type=mRNA|length=4841bp
ATAAATCATTTTACGACCCACACACAAGTTTTACCCCTTTCTGAGTGTTT
GTCAAGGTAATTGACGCGAAATTCAGCCACTGGTTGGAATAAAAAGCGCA
CTGCAGCACGCGGGATTTCCGAGATTCTCTTTCTGACGCCATTGCCGTCC
TTCGCGGTGCGTTCACACCACACATTCTTCCCAAGGCAAATGACCGCACG
TTGAACCGTGGGAGCCAGTCAAAAAGGAAGTACACGCACAAGTTTCAGCT
TGTTTGGAGGCATGTGGACACCTTGGGGCCTTGTAATTTTAGCATGCGTT
CGAACGCTCATCTGTTTGAAGGCAGCGTTGCACCTTCCTCAAGCTCTGGG
GTTACTCTCATTCAATAGTAATCCGTCCCAAGAGGGAAACGGGACGGTAA
TCATGTCACACGCGCTTACTGGACAAGCAGCTCTTGTGTTCCTCTTTGAT
ATCTGTGTGCGTGGTACCCGCGGTCATTTTTTTTGGTTGTTCCCGGTTTT
GGGGAAAAGGCAAACTCGGAACACAGTCAGAAGCGACACACATTCAACGA
CTCGGTCGTATCGCGCTGGAGTCCATGTGGTGAAACACAAATTATGTGCG
CCTGTCTCCAATCAGCTCGCTATGGGCATGTTTCAAAACAGCACTCACCC
ATGCAGGTTGTGAAAGGACTGTTTACCGTTCTCACGTTGTGTCCTTCTAT
CCTGATAGGTTCCACGACATAAATTGTCCTTCCCCGGCTCAGGAGACAAG
CAGGCAGCTAGCCCCATGTGTTCCCTTGCAGCGTAAGGACAATACACCAC
CATCCACGCGACGCCTTTTCTCACCCCACGCGATTTAGCAGGCCCCAGAC
ATTTCAATGCTTAATCGGCGGCAGGCGTTTCGTCGATGCAAAGTTCGGAG
GAGACGAGTGCCCTTTGAAACCAATCGGGGCATCGGGTACTCGGCTCCCA
AGCTAGATTCAGAACAAAGCCCATCGAGCTGCGCGAGTATCGACGGCGGT
AGCCCCTGCAGAAAAAGCGAGAGCAGCCATTGCAGCAACCTTTTCGAGGG
CAGCAACGACGACAGCAATAGCAGTGGATGTACCAGCCCTGGCTTCGACA
GTACCTGTTCCCCCCCCCCTAGCCCCTCTTGGACCGAAGCCTTGGAAGGC
ACAGACAGCTGTGAGTCTGCAACCATGCTCGGCACGCCGCTCTCCTCCCC
ATCCTCCACCCCCTCCTCCCCGACCTCGTCCCCGTGGTCAGCTGCCTTTT
TGGAGTATCAATCGCGCTTACCACCCGAGTACTACGAGGAGCATGCCGCC
GCCGCGGCGCGGGAATGGCCCGTTTCCCCCCTACGGTACGGGAAACCAAA
GCGTGAACTGTGGTCCTCATCTCCACCCCCCCCACCCCCTCGTAAAAGCC
TGAAGGAGCGGCTGGCCTTCCTGGGGTGGGGCGATCGCCCGGTTTCGGCC
CAGCGGAGAAGGGAAAAATTGACACCTTGGTGGCACGTCCTGTCCTTCCC
CACCTTCCCTTCCCCCCTGTCGTTGTGGTCAAGCCCTGCCTTCTTCGCGG
ACCCTCCATTCCACGACTTTCGCGCCCAGTCCCTCTCCTCCTCCACCACC
ACCTCCTTGTCCACTTCTTCGCACCCCTCCGGTCCTGACGACGTTGCCCA
GAAGCACCCACGCCGCCTTCCCTCCCCGTCGCTCCCGGCCACGTTCTCGT
CGGATGCCTGGAGGTCCGGAGCCGTGACGGGCGCAGGAGGAACGGGCGCC
AAATTGCCCAAGCCGTCGGAGAAGGCCTTCCGCCCGCCCGCCTCCACGCC
CTGCGGAGCAGCGGTTCCCCCCGCCTCCTTCGTTTCCATCTCCTCTGCTC
CTGCATCGGCCGCGTGTGACAGAGCGCTTGCTCGCTCGATTGCCATGCCT
GCGTCCAGCACTCCGGAGGCGCAAGCGGCCCTGAGTGGGACAGAGAGCAG
GCAGGTTGGTGGAGCGGGGAGGGAAGAGGAGGGTAACCAGGAGAATGCGG
GATATACCCAAGAAGGATCCCCTCGGCGACGGAAAGGGAAAAAACAAAGG
AAGCGAAACCGGGAAAAGAAGGGAGGAAAGCAAAAAGAAACGGGGGAAAA
AGCGGCCGGGACAGAGACGCTACCCCCTCTTCCCTCCCCGGCGACGGATA
CGGGAGCTCCTCCCAGCACAGCCAGGGCCGCCCCCTCGTCCTCGCCCGCA
GCCACCGCGGACGCCCCCGTGCCATCGCCGACCCCGCTGACGGCGCCTGC
GAGGCCCCGGGCGGTGCCTCGGGTGCACTTCTCGGAGGTGGAGCGGGTGG
TGTTGATCCCGGCCCTGGGGGACATGGACGCGGGCACGAAGGACGCCCTG
TTTTGGGGATTGATGGACTATGTGGCCTTCAAGGACCGGACCCTGCGGCT
GATGGGCTTGGGCAAGAAGAATTTCATGGAGTTGGACGCGATCGAGTTGG
TATGGGAGGCGGAGGACCGTGGGGAAGAGCTGACCCTGGCGGAAGCGGAG
GAAATGCTGGAAGCGGCGCGCGCGGTGGAGGAAAGGAAGGAGGTCAAGGA
AGAGGGAGAGGACGAGACGGAGGGAAGCCAAGCTCAGGGCACGGCGGGAA
AAGCGGTGGAGACGGGTTTGGTGGCCCCTTTGCCCATTGCTGTGGTGGAA
GTCGAGGCAGCGGCCTTGGAACCCTCGCTTATCCCCCGCCCCGCCACGCC
CTCCCCTCCGCTCGGGGCCCCTGCCCCCACCGCCCACCTCCCTCCCGAGG
TGTCGGAAGGGGTGTTGCGGCGGTCCACGAGCGCGTCGTCCGAAGATGTG
GGCACTGCCCTCCTCCTCCACGACACGCTCGTGGACCCTCCCTCCTTCCC
GCCCTCCCTCGGTTCCTACCTCTCACACGAGAACCCGTCGCACTTGCGGC
ACCGGCAACGGCATCGGCGCTATTCCTCCCTGTGCTCGTCGCCCGCGGAA
GGCCGTAAAGCCCGGTACCGGTCGGGGGAAGGGAGGGAGGAAGGGGGAGA
GGACGGGAAGGAGGAAGCTTTGCGCGCCAGAGAGCGGGAGGCGGCCTTGG
TCATGTGGTTGGACTTGGCGGTGTCCTCCCTAGGGGGGAGGAGAAAGGAA
TAACTCGCCCTTGGAGGTATTGACGGAGGGATCACCGGCCCGCTGGGTTA
ATTGGGGGTGGGAGCCAGAGAGGCGGCCGGGGGGGGACTCTGGCGTGGGA
GTGGGGTTAGAAGGGAGATGGGGCCAGACAGACAACGTGCGGGACGTGCC
AGGTTGTACCAAACGAGAGGCAGAGATGCAGGGACTCGGGGAGGAAGGGA
GGGATGGAGGGATGGAGGGATGGATGACTTGGAGTCTGGAAGATTGTCTC
ATTTGAGGGCTCGAGAGGGTGGAAGGGGCAATCAACGTCACCCCTTCCCT
GACTCGCCCCGCCCTGTCTCAAGAGGAGGGACAACATGAGACGCCGCGAG
TCAATAGGATGACGACATATTAACATGATGAATCAGGTACCCAACGCATG
CCTGTTGGACCGAGTGCATGCGAGTAGTTTATTGCCAGTTAGATAGACGC
GAGACATAGGCGACGTTAGTGCATTTGCATGCTTTTCGAAGGGAACTACT
AAAGAGACCTGGGGAAATGAATGGGACGGCCAAGATATTCCCGTCCCCGA
ATAGAAATTGTTGTGTCAACGCGCGAACGAGGGGGGTCGCGAGTGGAAAT
TTTTGAAATTGTACACAGACACGAGATTGCGGCAGCAGTGTGCCTGTACA
CGAATGCGAGGATACGAAGAATGTGCCGACGATTGGCAGTATACAGATCG
CAAATAGTCGAAGCGGAAGCGAACGCAGTGGAGGTGGAGGTGTTATGCAC
ACAATGAGGATGATGGTAGAGACCTCAAAAGTAGGTGATGATAAGGAGCA
AAGTGCGCCGAAAGGAGGCAAAGAAATGCTGTGAGGGGATGGAAGAGGCA
TGTGTTGTGGACCGAATCTGTCCAGAGATCTGGCGGATATTTTGGAAGTC
CAGTCGAGATGACCGTTGAATGGTCAAAAGTAAAATTATAAACGCCCCGG
TTGACAGGAAGGGGAAAACGTGGTGGTGGGAAAGAGGGCAAAGGATGAAA
GAGGAAAACGTGCGCGTGCCAAGGACGACGCACTGCTCCGCAAGGAGGGT
GGTGCTACCCACCGTCATGTTTCCTGTGAAATATCCGGTAGTGTAGGAGC
TGCCCGATGCATCCACAGCAATGCCGTTCCCGTCGTCACGTCCGCTGCCT
TCGAGCACAGGGTGAAAGAGGAAATTGTGCGCGCGCCAAGGACGACGCAC
TGCTCCGCATGCTGGATGCCATGGAGCGACAAATGATATAAGTCATCAAG
AGGGAGGGGGAAAGGACTAAGGGGGTAAGCGAGGGCCCCTTTTATGCTCA
GGCTGACAGGGGTAAAGGAGAAGGAGATTCCTTTCGACGGAGCGGGGGAC
CATGTCAGTACCGAAGAACAAGGAAGACCCCAGGTTTATGACCACGGCAT
TGGGTTCTATTCGGACTCGTTCACCATTCCTTTTCGCTGGCCGGCGCTAG
ATGAACATGCACGTGGAAGACGCCACAGCGTCCTTATCGATCCTCGGTGC
TCTTTGACTTGTTCATGTATCGATTGTCTGTCCTAGTTGAACGTTTTTAT
TCCTCGATACTCTATCCTCTGGGCACCTTTTCACATCCAATCGCAATAAC
CTTGGTATTACTTCATGCGCGTAGGATTGAGACAAGGAAACGAGAAGCGC
ATTCAACGAATTCAACACATCTGATGCATGAAGTACATCGGACCTTTCTC
GTATTTTGTTTTAAAGTTCTCTGGTCAAAAAATAATTTTAA back to topprotein sequence of rna1682 >rna1682-protein ID=rna1682-protein|Name=rna1682|organism=Nannochloropsis gaditana|type=polypeptide|length=100bp
MTVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASG
SSYTTGYFDGNMTDFSVSLIKENHVCGATPCLYRGSGGSKCICFGQSAPP back to topmRNA from alignment at CM002457.1:1250710..1251410- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1682 ID=rna1682|Name=rna1682|organism=Nannochloropsis gaditana|type=mRNA|length=701bp|location=Sequence derived from alignment at CM002457.1:1250710..1251410- (Nannochloropsis gaditana)
ATGACGGTGGGTAGCACCACCCTCACGGCTGTTGGTAACGATGACGTTTT
CATGATCAAGCTGGACTCCAGCGGCAGCCCTGTGTGGGCTACGAGCTTCG
GAGGCAGCGAATACAGCAGGGGAGTCGGTATTGCTGTGGATGCATCGGGC
AGCTCCTACACTACCGGGTATTTCGACGGAAACATGACGGTGGGTAGCAC
CACCCTCACGGCTGTTGGTAGCGGCGACGTTTTTATGATCAAGCTGTATC
CCTGATTCTATCATACGGACCGTCGACTCGCATCACCGAAACAAATTACT
GCGAAGTTCCTGCGGAAACAATACAAAGAGCAGCGTGCTTGAAATGGTAT
AGAAAGCATACTTACATCCCTCACACGACCGTGCTATCGGTTGCTACTGT
CATCACCTGAGTGTATCGTATCAGAAACCGAATACGGACTGCTCATAGCA
ATCTGCCGGCTATAATATTTGCAATTTGAATACATCATAGAGCTTAGAGA
GGGTATTATCAGGACGTGTGAATGCGTAGAGCTCGTGGCTCGTGTTGTGT
AGAAAAGGGCACCTTTTGCAGGGCGCACTTTTCGCAGGACTTTAGTGTAT
CGCTAATCAAAGAGAATCATGTGTGTGGCGCGACGCCGTGCCTCTATCGT
GGCAGTGGAGGAAGCAAGTGCATCTGTTTTGGACAGAGCGCGCCCCCATA
G back to topCoding sequence (CDS) from alignment at CM002457.1:1250710..1251410- >rna1682 ID=rna1682|Name=rna1682|organism=Nannochloropsis gaditana|type=CDS|length=606bp|location=Sequence derived from alignment at CM002457.1:1250710..1251410- (Nannochloropsis gaditana)
GACTTTAGTGTATCGCTAATCAAAGAGAATCATGTGTGTGGCGCGACGCC
GTGCCTCTATCGTGGCAGTGGAGGAAGCAAGTGCATCTGTTTTGGACAGA
GCGCGCCCCCATAGATGACGGTGGGTAGCACCACCCTCACGGCTGTTGGT
AACGATGACGTTTTCATGATCAAGCTGGACTCCAGCGGCAGCCCTGTGTG
GGCTACGAGCTTCGGAGGCAGCGAATACAGCAGGGGAGTCGGTATTGCTG
TGGATGCATCGGGCAGCTCCTACACTACCGGGTATTTCGACGGAAACATG
ACGGACTTTAGTGTATCGCTAATCAAAGAGAATCATGTGTGTGGCGCGAC
GCCGTGCCTCTATCGTGGCAGTGGAGGAAGCAAGTGCATCTGTTTTGGAC
AGAGCGCGCCCCCATAGATGACGGTGGGTAGCACCACCCTCACGGCTGTT
GGTAACGATGACGTTTTCATGATCAAGCTGGACTCCAGCGGCAGCCCTGT
GTGGGCTACGAGCTTCGGAGGCAGCGAATACAGCAGGGGAGTCGGTATTG
CTGTGGATGCATCGGGCAGCTCCTACACTACCGGGTATTTCGACGGAAAC
ATGACG back to top
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