EWM29001.1, cds1678 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29001.1 vs. NCBI_GenBank
Match: gi|585111500|gb|EWM29001.1| (hypothetical protein Naga_100373g1 [Nannochloropsis gaditana]) HSP 1 Score: 202.986 bits (515), Expect = 3.390e-66 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
Query: 1 MTVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDGNMTDFSVSLIKENHVCGATPCLYRGSGGSKCICFGQSAPP 100
MTVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDGNMTDFSVSLIKENHVCGATPCLYRGSGGSKCICFGQSAPP
Sbjct: 1 MTVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDGNMTDFSVSLIKENHVCGATPCLYRGSGGSKCICFGQSAPP 100
BLAST of EWM29001.1 vs. NCBI_GenBank
Match: gi|585100765|gb|EWM20836.1| (secreted protein [Nannochloropsis gaditana]) HSP 1 Score: 96.6709 bits (239), Expect = 6.042e-23 Identity = 49/69 (71.01%), Postives = 58/69 (84.06%), Query Frame = 0
Query: 1 MTVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDGNMTDFSVSL 69
MTVGSTTLT+ G++D+FMIKLD +GSPVWA SFGG++ G GIAVDASGSSYTTGYF+G MT S +L
Sbjct: 1 MTVGSTTLTSAGSEDIFMIKLDPNGSPVWAQSFGGTDADEGYGIAVDASGSSYTTGYFEGTMTVGSTTL 69 HSP 2 Score: 85.5001 bits (210), Expect = 1.531e-18 Identity = 45/63 (71.43%), Postives = 49/63 (77.78%), Query Frame = 0
Query: 1 MTVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDGNMT 63
MTVGSTTLT+ G D+FMIKLD G+PVWA SFGG + G IAVDASGSSYTTGYF G MT
Sbjct: 62 MTVGSTTLTSNGLTDIFMIKLDLDGNPVWAQSFGGIASNEGYDIAVDASGSSYTTGYFQGTMT 124 HSP 3 Score: 84.3445 bits (207), Expect = 3.684e-18 Identity = 47/81 (58.02%), Postives = 56/81 (69.14%), Query Frame = 0
Query: 1 MTVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDGNMT----------DFSVSLIK 71
MTVG+TTLTAVG+ ++MIKL+ G+PVWA SFGG+ G GIAVDASGSSYTTGYF MT DF + +IK
Sbjct: 123 MTVGNTTLTAVGSSGIYMIKLNLDGNPVWAQSFGGNADDEGKGIAVDASGSSYTTGYFAETMTVGSTNLTAVGDFDIFMIK 203
BLAST of EWM29001.1 vs. NCBI_GenBank
Match: gi|585100769|gb|EWM20839.1| (secreted protein [Nannochloropsis gaditana]) HSP 1 Score: 84.7297 bits (208), Expect = 4.847e-17 Identity = 44/81 (54.32%), Postives = 54/81 (66.67%), Query Frame = 0
Query: 1 MTVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDGNMTDFSVSLIKENHVCGATPC 81
+TVGSTTLT+ G D+FMIKLD G+PVWA FGG++ + G I VDASGSSYT G F GNMT V + + + PC
Sbjct: 461 LTVGSTTLTSAGFSDIFMIKLDPDGNPVWAQGFGGTDSNVGFRIGVDASGSSYTAGSFKGNMT---VGSVPPSRLLAVPPC 538 HSP 2 Score: 81.2629 bits (199), Expect = 7.580e-16 Identity = 44/69 (63.77%), Postives = 52/69 (75.36%), Query Frame = 0
Query: 1 MTVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDGNMTDFSVSL 69
MTVGS LTAVG D+FMIKLD G+PVWA SFGG++ + GIA+DASGSSYT G F GN+T S +L
Sbjct: 401 MTVGSANLTAVGGPDIFMIKLDLDGNPVWAQSFGGTD-TNANGIALDASGSSYTAGGFTGNLTVGSTTL 468
BLAST of EWM29001.1 vs. NCBI_GenBank
Match: gi|585111492|gb|EWM28994.1| (nuclear protein set [Nannochloropsis gaditana]) HSP 1 Score: 78.9518 bits (193), Expect = 8.243e-16 Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0
Query: 64 DFSVSLIKENHVCGATPCLYRGSGGSKCICFGQSAPP 100
DFSVSLIKENHVCGATPCLYRGSGGSKCICFGQS P
Sbjct: 197 DFSVSLIKENHVCGATPCLYRGSGGSKCICFGQSEHP 233
BLAST of EWM29001.1 vs. NCBI_GenBank
Match: gi|585101746|gb|EWM21515.1| (hypothetical protein Naga_100317g3 [Nannochloropsis gaditana]) HSP 1 Score: 80.4925 bits (197), Expect = 1.429e-15 Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 0
Query: 1 MTVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDGNMT 63
M VG+TTLTAVG D F+IKLDS+GSPVWA SFG + G+GI VDAS +S+ TG+F GNM+
Sbjct: 454 MPVGNTTLTAVGLQDFFVIKLDSTGSPVWAKSFGSNLDDMGLGITVDASDNSFITGFFSGNMS 516 HSP 2 Score: 75.8702 bits (185), Expect = 6.288e-14 Identity = 35/60 (58.33%), Postives = 48/60 (80.00%), Query Frame = 0
Query: 1 MTVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDG 60
M+VG+TTL +G+ D++MIKL+S+G PVWA +FGG+ +G I VDASG+SYTTG+F G
Sbjct: 515 MSVGNTTLPIIGSQDIYMIKLNSTGEPVWAQNFGGTGEPQGNSIVVDASGNSYTTGFFYG 574 HSP 3 Score: 58.5362 bits (140), Expect = 6.144e-8 Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 0
Query: 1 MTVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDGNMT--DFSVSLIKENHVC 76
+ VG + N +F+IKLDS+G+PVWA +F + G GIAVDA +SY TG F+GN++ FS++ + +C
Sbjct: 576 LNVGDIRFLSFSNA-IFLIKLDSTGNPVWAKNFTSVGTAEGNGIAVDAFENSYITGEFNGNLSVGSFSLTAPERQAMC 652 HSP 4 Score: 56.9954 bits (136), Expect = 2.201e-7 Identity = 32/62 (51.61%), Postives = 37/62 (59.68%), Query Frame = 0
Query: 1 MTVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDGNM 62
M VG T LT +VF+ KLDS G VWA +FG G IAVD SG+SYTTG F+ M
Sbjct: 393 MIVGVTILTPGSEQNVFVFKLDSGGQVVWAKNFGTIGIPYGQSIAVDLSGNSYTTGPFEETM 454
BLAST of EWM29001.1 vs. NCBI_GenBank
Match: gi|585099315|gb|EWM20045.1| (hypothetical protein Naga_102096g1 [Nannochloropsis gaditana]) HSP 1 Score: 65.855 bits (159), Expect = 7.617e-12 Identity = 32/46 (69.57%), Postives = 36/46 (78.26%), Query Frame = 0
Query: 18 MIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDGNMT 63
MIKLD G+PVWA SFGG++ +G GI VDASGSSYTTG F G MT
Sbjct: 1 MIKLDPDGNPVWAQSFGGTDDDQGYGIGVDASGSSYTTGGFQGTMT 46
BLAST of EWM29001.1 vs. NCBI_GenBank
Match: gi|1210264185|dbj|BAZ83180.1| (hypothetical protein NIES73_44670 [Sphaerospermopsis kisseleviana NIES-73]) HSP 1 Score: 65.855 bits (159), Expect = 1.892e-10 Identity = 32/57 (56.14%), Postives = 39/57 (68.42%), Query Frame = 0
Query: 2 TVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYF 58
T G LT+ G+DD F+ KLDSSG +WA FGG+ Y G GIA D +G+SY TGYF
Sbjct: 165 TFGDIALTSAGSDDAFITKLDSSGKFLWAQKFGGTSYDYGEGIASDGAGNSYITGYF 221 HSP 2 Score: 61.2326 bits (147), Expect = 7.316e-9 Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 0
Query: 2 TVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYF 58
T G+ TLT+ G D F+ KLDSSG+ +WA FGG+ Y +GI+VD+SG+SY TG F
Sbjct: 104 TFGNITLTSTGLGDAFITKLDSSGNFLWAQKFGGASYDIAMGISVDSSGNSYVTGSF 160 HSP 3 Score: 60.077 bits (144), Expect = 2.095e-8 Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 0
Query: 1 MTVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYF 58
+T G+TTLT+ G +D F+ KLD SG+ +WA GGS Y+ GI VD G++Y TG+F
Sbjct: 42 VTFGNTTLTSTGGNDSFIAKLDKSGNVLWAQKLGGSSYNTSSGITVDNLGNTYATGFF 99 HSP 4 Score: 57.7658 bits (138), Expect = 1.108e-7 Identity = 30/59 (50.85%), Postives = 38/59 (64.41%), Query Frame = 0
Query: 2 TVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDG 60
T G TLT+ G D F+ KLDSSG +WA GG+ Y GI VD+SG++Y TG F+G
Sbjct: 226 TFGDITLTSAGGSDGFITKLDSSGKFLWAKKLGGTSYDSAHGITVDSSGNTYITGSFNG 284 HSP 5 Score: 56.225 bits (134), Expect = 4.009e-7 Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 0
Query: 2 TVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFD-----GN--MTDFSVSLIKENHVCGATPCL 82
T G+ TLT+ G+ D F+ KLDS+G + A +FGG+ RG+ I DA G+ Y TG F+ GN + FS+S+ + + ATP +
Sbjct: 347 TFGNITLTSAGDSDAFVAKLDSNGKFLSAQNFGGTLADRGLDITSDAKGNIYATGGFENTATFGNQYLRRFSLSMAHQTNFLIATPII 434 HSP 6 Score: 55.4546 bits (132), Expect = 7.333e-7 Identity = 30/57 (52.63%), Postives = 38/57 (66.67%), Query Frame = 0
Query: 2 TVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYF 58
T G+ TLT+ GND+ F+ KLDSSG +WA F S + GI VD+SG+ Y TGYF
Sbjct: 287 TFGNITLTSTGNDNAFITKLDSSGKFLWAQKF-DSIFCEANGITVDSSGNIYVTGYF 342
BLAST of EWM29001.1 vs. NCBI_GenBank
Match: gi|653153451|ref|WP_027402469.1| (hypothetical protein [Aphanizomenon flos-aquae]) HSP 1 Score: 65.4698 bits (158), Expect = 2.648e-10 Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = 0
Query: 4 GSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDGNMTDF 65
G + LT+VGN DVF+ KL+S GS WA SFGG+ +G +AVD+SG+ Y+TGYF+G + DF
Sbjct: 339 GVSNLTSVGNTDVFISKLNSDGSFAWAKSFGGTSADQGYSLAVDSSGNVYSTGYFNGTV-DF 399 HSP 2 Score: 61.6178 bits (148), Expect = 5.312e-9 Identity = 32/62 (51.61%), Postives = 46/62 (74.19%), Query Frame = 0
Query: 4 GSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDGNMTDF 65
G + L++ GN DVF+ KL+S GS WA SFGG+ +G+ +AVD+SG+ Y+TGYF+G + DF
Sbjct: 209 GVSNLSSGGNTDVFISKLNSDGSFAWAKSFGGTTADQGLSLAVDSSGNVYSTGYFNGTV-DF 269 HSP 3 Score: 56.6102 bits (135), Expect = 3.205e-7 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 4 GSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDG 60
G + L++ G DVF+ KL+ GS WA SFGG+ +G+ + VD+SG+ Y+TGYF+G
Sbjct: 274 GVSNLSSAGGQDVFISKLNGDGSFAWAKSFGGTTADQGLSLTVDSSGNVYSTGYFNG 330
BLAST of EWM29001.1 vs. NCBI_GenBank
Match: gi|1085118333|gb|OGT13239.1| (hypothetical protein A3F73_07820 [Gallionellales bacterium RIFCSPLOWO2_12_FULL_59_22]) HSP 1 Score: 64.3142 bits (155), Expect = 6.288e-10 Identity = 37/75 (49.33%), Postives = 51/75 (68.00%), Query Frame = 0
Query: 1 MTVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYS-RGVGIAVDASGSSYTTGYFD-GNMTDFSVSLIKEN 73
+T+GS TLT +G D F+ KLD+SG+ VWA ++GG+ S RG IAVDASG+ Y GYF N+T +++ I N
Sbjct: 60 LTLGSVTLTKIGGLDAFVAKLDASGTVVWAKNYGGAGASARGNSIAVDASGNVYLGGYFQAANLTTPALTKIGSN 134
BLAST of EWM29001.1 vs. NCBI_GenBank
Match: gi|1121336446|ref|WP_073644345.1| (hypothetical protein [Nostoc calcicola] >gi|1115261606|gb|OKH25311.1| hypothetical protein FACHB389_29560 [Nostoc calcicola FACHB-389]) HSP 1 Score: 63.929 bits (154), Expect = 1.021e-9 Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query: 2 TVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDGNMT 63
T + TLT+VGN+D F+ KLDSSG+ +WA + GG+ G GI VD +G++Y TGYF N T
Sbjct: 226 TFDNITLTSVGNNDAFITKLDSSGNFLWAKNLGGTSDDSGRGIIVDETGNAYFTGYFSDNAT 287 HSP 2 Score: 60.4622 bits (145), Expect = 1.719e-8 Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 0
Query: 2 TVGSTTLTAVGNDDVFMIKLDSSGSPVWATSFGGSEYSRGVGIAVDASGSSYTTGYFDGNMTDFSVSL 69
T G+TT ++ GN DVF+ KLD++G+ VWA + GG+E G GI D G+ Y +G F G T S +L
Sbjct: 287 TFGTTTFSSAGNTDVFVTKLDNNGNTVWAKNLGGTESDEGYGIVADEVGNIYVSGIFSGTATFASTTL 354 The following BLAST results are available for this feature:
BLAST of EWM29001.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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