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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100373g6.5924.mrna |
| Orig protein id | gnl|cribi|Naga_100373g6.5924 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1245805..1250645 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1681 ID=rna1681|Name=rna1681|organism=Nannochloropsis gaditana|type=mRNA|length=213bp
ATGATGTTGCCAAACGTGAAAATCAGCACGATTAAAAACCCGACCCCTGC
TGATTCCCTTTCCTTTGTTGGCTGTCATCCTTACGCAACAAATGACCCTG
GACGTATTCGTGCGATAGTCAGACGCGGCGAGCATCAATTTTTGGCGTAT
TTTTCGACCATGGGTGAATATTCGACTGAATATAACCAAGATACGTGTGC
TTCCTCATTTTGA back to topprotein sequence of rna1681 >rna1681-protein ID=rna1681-protein|Name=rna1681|organism=Nannochloropsis gaditana|type=polypeptide|length=748bp
MLNRRQAFRRCKVRRRRVPFETNRGIGYSAPKLDSEQSPSSCASIDGGSP
CRKSESSHCSNLFEGSNDDSNSSGCTSPGFDSTCSPPPSPSWTEALEGTD
SCESATMLGTPLSSPSSTPSSPTSSPWSAAFLEYQSRLPPEYYEEHAAAA
AREWPVSPLRYGKPKRELWSSSPPPPPPRKSLKERLAFLGWGDRPVSAQR
RREKLTPWWHVLSFPTFPSPLSLWSSPAFFADPPFHDFRAQSLSSSTTTS
LSTSSHPSGPDDVAQKHPRRLPSPSLPATFSSDAWRSGAVTGAGGTGAKL
PKPSEKAFRPPASTPCGAAVPPASFVSISSAPASAACDRALARSIAMPAS
STPEAQAALSGTESRQVGGAGREEEGNQENAGYTQEGSPRRRKGKKQRKR
NREKKGGKQKETGEKAAGTETLPPLPSPATDTGAPPSTARAAPSSSPAAT
ADAPVPSPTPLTAPARPRAVPRVHFSEVERVVLIPALGDMDAGTKDALFW
GLMDYVAFKDRTLRLMGLGKKNFMELDAIELVWEAEDRGEELTLAEAEEM
LEAARAVEERKEVKEEGEDETEGSQAQGTAGKAVETGLVAPLPIAVVEVE
AAALEPSLIPRPATPSPPLGAPAPTAHLPPEVSEGVLRRSTSASSEDVGT
ALLLHDTLVDPPSFPPSLGSYLSHENPSHLRHRQRHRRYSSLCSSPAEGR
KARYRSGEGREEGGEDGKEEALRAREREAALVMWLDLAVSSLGGRRKE back to topmRNA from alignment at CM002457.1:1245805..1250645+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1681 ID=rna1681|Name=rna1681|organism=Nannochloropsis gaditana|type=mRNA|length=4841bp|location=Sequence derived from alignment at CM002457.1:1245805..1250645+ (Nannochloropsis gaditana)
ATAAATCATTTTACGACCCACACACAAGTTTTACCCCTTTCTGAGTGTTT
GTCAAGGTAATTGACGCGAAATTCAGCCACTGGTTGGAATAAAAAGCGCA
CTGCAGCACGCGGGATTTCCGAGATTCTCTTTCTGACGCCATTGCCGTCC
TTCGCGGTGCGTTCACACCACACATTCTTCCCAAGGCAAATGACCGCACG
TTGAACCGTGGGAGCCAGTCAAAAAGGAAGTACACGCACAAGTTTCAGCT
TGTTTGGAGGCATGTGGACACCTTGGGGCCTTGTAATTTTAGCATGCGTT
CGAACGCTCATCTGTTTGAAGGCAGCGTTGCACCTTCCTCAAGCTCTGGG
GTTACTCTCATTCAATAGTAATCCGTCCCAAGAGGGAAACGGGACGGTAA
TCATGTCACACGCGCTTACTGGACAAGCAGCTCTTGTGTTCCTCTTTGAT
ATCTGTGTGCGTGGTACCCGCGGTCATTTTTTTTGGTTGTTCCCGGTTTT
GGGGAAAAGGCAAACTCGGAACACAGTCAGAAGCGACACACATTCAACGA
CTCGGTCGTATCGCGCTGGAGTCCATGTGGTGAAACACAAATTATGTGCG
CCTGTCTCCAATCAGCTCGCTATGGGCATGTTTCAAAACAGCACTCACCC
ATGCAGGTTGTGAAAGGACTGTTTACCGTTCTCACGTTGTGTCCTTCTAT
CCTGATAGGTTCCACGACATAAATTGTCCTTCCCCGGCTCAGGAGACAAG
CAGGCAGCTAGCCCCATGTGTTCCCTTGCAGCGTAAGGACAATACACCAC
CATCCACGCGACGCCTTTTCTCACCCCACGCGATTTAGCAGGCCCCAGAC
ATTTCAATGCTTAATCGGCGGCAGGCGTTTCGTCGATGCAAAGTTCGGAG
GAGACGAGTGCCCTTTGAAACCAATCGGGGCATCGGGTACTCGGCTCCCA
AGCTAGATTCAGAACAAAGCCCATCGAGCTGCGCGAGTATCGACGGCGGT
AGCCCCTGCAGAAAAAGCGAGAGCAGCCATTGCAGCAACCTTTTCGAGGG
CAGCAACGACGACAGCAATAGCAGTGGATGTACCAGCCCTGGCTTCGACA
GTAcctgttcccccccccctagcCCCTCTTGGACCGAAGCCTTGGAAGGC
ACAGACAGCTGTGAGTCTGCAACCATGCTCGGCacgccgctctcctcccc
atcctccaccccctcctccccgacctcgtCCCCGTGGTCAGCTGCCTTTT
TGGAGTATCAATCGCGCTTACCACCCGAGTACTACGAGGAGcatgccgcc
gccgcggcgcGGGAATGGCCCGTTTCCCCCCTACGGTACGGGAAACCAAA
GCGTGAACTGTGGTCCTCAtctccaccccccccaccccctcgtAAAAGCC
TGAAGGAGCGGCTGGCCTTCCTGGGGTGGGGCGATCGCCCGGTTTCGGCC
CagcggagaagggaaaaattGACACCTTGGTGGCACGtcctgtccttccc
caccttcccttcccccctgtcGTTGTGGTCAAGCCCTGCCTTCTTCGCGG
ACCCTCCATTCCACGACTTTCGCGCccagtccctctcctcctccaccacc
acctccttgtccacttCTTCGCACCCCTCCGGTCCTGACGACGTTGCCCA
GAAGCACCCacgccgccttccctccccgtcgctcCCGGCCACGTTCTCGT
CGGATGCCTGGAGGTCCGGAGCCGTgacgggcgcaggaggaacgGGCGCC
AAATTGCCCAAGCCGTCGGAGAAGGccttccgcccgcccgcctccacgcc
ctgcgGAGCAGCggttccccccgcctccttcgtttccatctcctctgctc
ctgcaTCGGCCGCGTGTGACAGAGCGCTTGCTCGCTCGATTGCCATGCCT
GCGTCCAGCACTCCGGAGGCGCAAGCGGCCCTGAGTGGGACAGAGAGCAG
GCAGGTTGgtggagcggggagggaagaggagggtaaCCAGGAGAATGCGG
GATATACCCAAGAAGGATCCCCTCGGCgacggaaagggaaaaaacaaaGG
AAGCGAAAccgggaaaagaagggaggaaagcaaaaaGAAACGGGGGAAAA
AGCGGCCGGGACAGAGACGctaccccctcttccctccccggcgaCGGATA
CGGGAGCTCCTCCCAGCACAGCCAGGGccgccccctcgtcctcgcccgca
GCCACCGCGGACGCCCCCGTGCCATCGCCGACCCCGCTGACGGCGCCTGC
GAGGCCCCGGGCGGTGCCTCGGGTGCACTTCTCGGAGGTGGAGCGGGTGG
TGTTGATCCCGGCCCTGGGGGACATGGACGCGGGCACGAAGGACGCCCTG
TTTTGGGGATTGATGGACTATGTGGCCTTCAAGGACCGGACCCTGCGGCT
GATGGGCTTGGGCAAGAAGAATTTCATGGAGTTGGACGCGATCGAGTTGG
TatgggaggcggaggaccgTGGGGAAGAGCTGACCCtggcggaagcggag
gaaatgcTGGAAGCGGCGcgcgcggtggaggaaaggaaggaggtcaagga
agagggagaggacgagacggagggaagcCAAGCTCAGGGCACGGCGGGAA
AAGCGGTGGAGACGGGTTTGGTGGCCCCTTTGCCCATTGCTGTGGTGGAA
GTCGAGGCAGCGGCCTTGGAACCCTCGCTtatcccccgccccgccacgcc
ctcccctccgctcggggcccctgcccccaccgcccacctccctcccgagg
TGTCGGAAGGGGTGTTGCGGCGGTCCACGAGCGCGTCGTCCGAAGATGTG
GgcactgccctcctcctccacgacacGCTCGtggaccctccctccttccc
gccctccctcggttcCTACCTCTCACACGAGAACCCGTCGCACTTGCGGC
ACCGGCAACGGCATCGGCGCTATTCCTCCCTGTGCTCGTCGCCCGCGGAA
GGCCGTAAAGCCCGGTACCggtcgggggaagggagggaggaagggggaga
ggacgggaaggaggaagctttgCGCGCCagagagcgggaggcggccttgg
tcaTGTGGTTGGACTTGGCGGTGTCCTCCctaggggggaggagaaaggaa
taACTCGCCCTTGGAGGTATTGACGGAGGGATCACCGGCCCGCTGGGTTA
ATTGGGGGTGGGAGCCAGAGAggcggccggggggggactCTGGCGTGGGA
GTGGGGTTagaagggagatggggcCAGACAGACAACGTGCGGGACGTGCC
AGGTTGTACCAAACGAGAGGCAGAGATGCAGGGactcggggaggaaggga
gggatggagggatggagggatggatgacTTGGAGTCTGGAAGATTGTCTC
ATTTGAGGGCtcgagagggtggaaggggcaaTCAACGTCACCCCTTCCCT
GACTCGCCCCGCCCTGTctcaagaggagggacaaCATGAGACGCCGCGAG
TCAATAGGATGACGACATATTAACATGATGAATCAGGTACCCAACGCATG
CCTGTTGGACCGAGTGCATGCGAGTAGTTTATTGCCAGTTAGATAGACGC
GAGACATAGGCGACGTTAGTGCATTTGCATGCTTTTCGAAGGGAACTACT
AAAGAGACCTGGGGAAATGAATGGGACGGCCAAGATATTCCCGTCCCCGA
ATAGAAATTGTTGTGTCAACGCGCGAACGAGGGGGGTCGCGAGTGGAAAT
TTTTGAAATTGTACACAGACACGAGATTGCGGCAGCAGTGTGCCTGTACA
CGAATGCGAGGATACGAAGAATGTGCCGACGATTGGCAGTATACAGATCG
CAAATAGTCGAAGCGGAAGCGAACgcagtggaggtggaggtgttATGCAC
ACAATGAGGATGATGGTAGAGACCTCAAAAGTAGGTGATGATAAGGAGCA
AAGTGCGCCgaaaggaggcaaagaaatgctgtgaggggatggaagaggca
tGTGTTGTGGACCGAATCTGTCCAGAGATCTGGCGGATATTTTGGAAGTC
CAGTCGAGATGACCGTTGAATGGTCAAAAGTAAAATTATAAACGCCCCGG
Ttgacaggaaggggaaaacgtggtggtgggaaagagggcaaaggatgaaa
gaggaaaacgtGCGCGTGCCAAGGACGACGCACTGCTCCGCAAGGAGGGT
GGTGCTACCCACCGTCATGTTTCCTGTGAAATATCCGGTAGTGTAGGAGC
TGCCCGATGCATCCACAGCAATGCCGTTCCCGTCGTCACGTCCGCTGCCT
TCGAGCACAgggtgaaagaggaaatTGTGCGCGCGCCAAGGACGACGCAC
TGCTCCGCATGCTGGATGCCATGGAGCGACAAATGATATAAGTcatcaag
agggagggggaaaggactaAGGGGGTAAGCGAGGGCCCCTTTTATGCTCA
GGCTGACAGGGgtaaaggagaaggagattcCTTTCGACGGAGCGGGGGAC
CATGTCAGTACCGAAGAACAAGGAAGACCCCAGGTTTATGACCACGGCAT
TGGGTTCTATTCGGACTCGTTCACCATTCCTTTTCGCTGGCCGGCGCTAG
ATGAACATGCACGTGGAAGACGCCACAGCGTCCTTATCGATCCTCGGTGC
TCTTTGACTTGTTCATGTATCGATTGTCTGTCCTAGTTGAACGTTTTTAT
TCCTCGATACTCTATCCTCTGGGCACCTTTTCACATCCAATCGCAATAAC
CTTGGTATTACTTCATGCGCGTAGGATTGAGACAAGGAAACGAGAAGCGC
ATTCAACGAATTCAACACATCTGATGCATGAAGTACATCGGACCTTTCTC
GTATTTTGTTTTAAAGTTCTCTGGTCAAAAAATAATTTTAA back to topCoding sequence (CDS) from alignment at CM002457.1:1245805..1250645+ >rna1681 ID=rna1681|Name=rna1681|organism=Nannochloropsis gaditana|type=CDS|length=2247bp|location=Sequence derived from alignment at CM002457.1:1245805..1250645+ (Nannochloropsis gaditana)
ATGCTTAATCGGCGGCAGGCGTTTCGTCGATGCAAAGTTCGGAGGAGACG
AGTGCCCTTTGAAACCAATCGGGGCATCGGGTACTCGGCTCCCAAGCTAG
ATTCAGAACAAAGCCCATCGAGCTGCGCGAGTATCGACGGCGGTAGCCCC
TGCAGAAAAAGCGAGAGCAGCCATTGCAGCAACCTTTTCGAGGGCAGCAA
CGACGACAGCAATAGCAGTGGATGTACCAGCCCTGGCTTCGACAGTAcct
gttcccccccccctagcCCCTCTTGGACCGAAGCCTTGGAAGGCACAGAC
AGCTGTGAGTCTGCAACCATGCTCGGCacgccgctctcctccccatcctc
caccccctcctccccgacctcgtCCCCGTGGTCAGCTGCCTTTTTGGAGT
ATCAATCGCGCTTACCACCCGAGTACTACGAGGAGcatgccgccgccgcg
gcgcGGGAATGGCCCGTTTCCCCCCTACGGTACGGGAAACCAAAGCGTGA
ACTGTGGTCCTCAtctccaccccccccaccccctcgtAAAAGCCTGAAGG
AGCGGCTGGCCTTCCTGGGGTGGGGCGATCGCCCGGTTTCGGCCCagcgg
agaagggaaaaattGACACCTTGGTGGCACGtcctgtccttccccacctt
cccttcccccctgtcGTTGTGGTCAAGCCCTGCCTTCTTCGCGGACCCTC
CATTCCACGACTTTCGCGCccagtccctctcctcctccaccaccacctcc
ttgtccacttCTTCGCACCCCTCCGGTCCTGACGACGTTGCCCAGAAGCA
CCCacgccgccttccctccccgtcgctcCCGGCCACGTTCTCGTCGGATG
CCTGGAGGTCCGGAGCCGTgacgggcgcaggaggaacgGGCGCCAAATTG
CCCAAGCCGTCGGAGAAGGccttccgcccgcccgcctccacgccctgcgG
AGCAGCggttccccccgcctccttcgtttccatctcctctgctcctgcaT
CGGCCGCGTGTGACAGAGCGCTTGCTCGCTCGATTGCCATGCCTGCGTCC
AGCACTCCGGAGGCGCAAGCGGCCCTGAGTGGGACAGAGAGCAGGCAGGT
TGgtggagcggggagggaagaggagggtaaCCAGGAGAATGCGGGATATA
CCCAAGAAGGATCCCCTCGGCgacggaaagggaaaaaacaaaGGAAGCGA
AAccgggaaaagaagggaggaaagcaaaaaGAAACGGGGGAAAAAGCGGC
CGGGACAGAGACGctaccccctcttccctccccggcgaCGGATACGGGAG
CTCCTCCCAGCACAGCCAGGGccgccccctcgtcctcgcccgcaGCCACC
GCGGACGCCCCCGTGCCATCGCCGACCCCGCTGACGGCGCCTGCGAGGCC
CCGGGCGGTGCCTCGGGTGCACTTCTCGGAGGTGGAGCGGGTGGTGTTGA
TCCCGGCCCTGGGGGACATGGACGCGGGCACGAAGGACGCCCTGTTTTGG
GGATTGATGGACTATGTGGCCTTCAAGGACCGGACCCTGCGGCTGATGGG
CTTGGGCAAGAAGAATTTCATGGAGTTGGACGCGATCGAGTTGGTatggg
aggcggaggaccgTGGGGAAGAGCTGACCCtggcggaagcggaggaaatg
cTGGAAGCGGCGcgcgcggtggaggaaaggaaggaggtcaaggaagaggg
agaggacgagacggagggaagcCAAGCTCAGGGCACGGCGGGAAAAGCGG
TGGAGACGGGTTTGGTGGCCCCTTTGCCCATTGCTGTGGTGGAAGTCGAG
GCAGCGGCCTTGGAACCCTCGCTtatcccccgccccgccacgccctcccc
tccgctcggggcccctgcccccaccgcccacctccctcccgaggTGTCGG
AAGGGGTGTTGCGGCGGTCCACGAGCGCGTCGTCCGAAGATGTGGgcact
gccctcctcctccacgacacGCTCGtggaccctccctccttcccgccctc
cctcggttcCTACCTCTCACACGAGAACCCGTCGCACTTGCGGCACCGGC
AACGGCATCGGCGCTATTCCTCCCTGTGCTCGTCGCCCGCGGAAGGCCGT
AAAGCCCGGTACCggtcgggggaagggagggaggaagggggagaggacgg
gaaggaggaagctttgCGCGCCagagagcgggaggcggccttggtcaTGT
GGTTGGACTTGGCGGTGTCCTCCctaggggggaggagaaaggaataA back to top
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