EWM28998.1, cds1677 (CDS) Nannochloropsis gaditana

Overview
NameEWM28998.1
Unique Namecds1677
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1246661..1248907 +

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Properties
Property NameValue
Protein idEWM28998.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100373g6.5924.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1246661..1248907 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28998.1 vs. NCBI_GenBank
Match: gi|585111497|gb|EWM28998.1| (hypothetical protein Naga_100373g6 [Nannochloropsis gaditana])

HSP 1 Score: 1484.55 bits (3842), Expect = 0.000e+0
Identity = 748/748 (100.00%), Postives = 748/748 (100.00%), Query Frame = 0 
Query:    1 MLNRRQAFRRCKVRRRRVPFETNRGIGYSAPKLDSEQSPSSCASIDGGSPCRKSESSHCSNLFEGSNDDSNSSGCTSPGFDSTCSPPPSPSWTEALEGTDSCESATMLGTPLSSPSSTPSSPTSSPWSAAFLEYQSRLPPEYYEEHAAAAAREWPVSPLRYGKPKRELWSSSPPPPPPRKSLKERLAFLGWGDRPVSAQRRREKLTPWWHVLSFPTFPSPLSLWSSPAFFADPPFHDFRAQSLSSSTTTSLSTSSHPSGPDDVAQKHPRRLPSPSLPATFSSDAWRSGAVTGAGGTGAKLPKPSEKAFRPPASTPCGAAVPPASFVSISSAPASAACDRALARSIAMPASSTPEAQAALSGTESRQVGGAGREEEGNQENAGYTQEGSPRRRKGKKQRKRNREKKGGKQKETGEKAAGTETLPPLPSPATDTGAPPSTARAAPSSSPAATADAPVPSPTPLTAPARPRAVPRVHFSEVERVVLIPALGDMDAGTKDALFWGLMDYVAFKDRTLRLMGLGKKNFMELDAIELVWEAEDRGEELTLAEAEEMLEAARAVEERKEVKEEGEDETEGSQAQGTAGKAVETGLVAPLPIAVVEVEAAALEPSLIPRPATPSPPLGAPAPTAHLPPEVSEGVLRRSTSASSEDVGTALLLHDTLVDPPSFPPSLGSYLSHENPSHLRHRQRHRRYSSLCSSPAEGRKARYRSGEGREEGGEDGKEEALRAREREAALVMWLDLAVSSLGGRRKE 748
            MLNRRQAFRRCKVRRRRVPFETNRGIGYSAPKLDSEQSPSSCASIDGGSPCRKSESSHCSNLFEGSNDDSNSSGCTSPGFDSTCSPPPSPSWTEALEGTDSCESATMLGTPLSSPSSTPSSPTSSPWSAAFLEYQSRLPPEYYEEHAAAAAREWPVSPLRYGKPKRELWSSSPPPPPPRKSLKERLAFLGWGDRPVSAQRRREKLTPWWHVLSFPTFPSPLSLWSSPAFFADPPFHDFRAQSLSSSTTTSLSTSSHPSGPDDVAQKHPRRLPSPSLPATFSSDAWRSGAVTGAGGTGAKLPKPSEKAFRPPASTPCGAAVPPASFVSISSAPASAACDRALARSIAMPASSTPEAQAALSGTESRQVGGAGREEEGNQENAGYTQEGSPRRRKGKKQRKRNREKKGGKQKETGEKAAGTETLPPLPSPATDTGAPPSTARAAPSSSPAATADAPVPSPTPLTAPARPRAVPRVHFSEVERVVLIPALGDMDAGTKDALFWGLMDYVAFKDRTLRLMGLGKKNFMELDAIELVWEAEDRGEELTLAEAEEMLEAARAVEERKEVKEEGEDETEGSQAQGTAGKAVETGLVAPLPIAVVEVEAAALEPSLIPRPATPSPPLGAPAPTAHLPPEVSEGVLRRSTSASSEDVGTALLLHDTLVDPPSFPPSLGSYLSHENPSHLRHRQRHRRYSSLCSSPAEGRKARYRSGEGREEGGEDGKEEALRAREREAALVMWLDLAVSSLGGRRKE
Sbjct:    1 MLNRRQAFRRCKVRRRRVPFETNRGIGYSAPKLDSEQSPSSCASIDGGSPCRKSESSHCSNLFEGSNDDSNSSGCTSPGFDSTCSPPPSPSWTEALEGTDSCESATMLGTPLSSPSSTPSSPTSSPWSAAFLEYQSRLPPEYYEEHAAAAAREWPVSPLRYGKPKRELWSSSPPPPPPRKSLKERLAFLGWGDRPVSAQRRREKLTPWWHVLSFPTFPSPLSLWSSPAFFADPPFHDFRAQSLSSSTTTSLSTSSHPSGPDDVAQKHPRRLPSPSLPATFSSDAWRSGAVTGAGGTGAKLPKPSEKAFRPPASTPCGAAVPPASFVSISSAPASAACDRALARSIAMPASSTPEAQAALSGTESRQVGGAGREEEGNQENAGYTQEGSPRRRKGKKQRKRNREKKGGKQKETGEKAAGTETLPPLPSPATDTGAPPSTARAAPSSSPAATADAPVPSPTPLTAPARPRAVPRVHFSEVERVVLIPALGDMDAGTKDALFWGLMDYVAFKDRTLRLMGLGKKNFMELDAIELVWEAEDRGEELTLAEAEEMLEAARAVEERKEVKEEGEDETEGSQAQGTAGKAVETGLVAPLPIAVVEVEAAALEPSLIPRPATPSPPLGAPAPTAHLPPEVSEGVLRRSTSASSEDVGTALLLHDTLVDPPSFPPSLGSYLSHENPSHLRHRQRHRRYSSLCSSPAEGRKARYRSGEGREEGGEDGKEEALRAREREAALVMWLDLAVSSLGGRRKE 748
The following BLAST results are available for this feature:
BLAST of EWM28998.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111497|gb|EWM28998.1|0.000e+0100.00hypothetical protein Naga_100373g6 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1681rna1681Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications