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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101720g1.10003.mrna |
| Orig protein id | gnl|cribi|Naga_101720g1.10003 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1233918..1235632 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1674 ID=rna1674|Name=rna1674|organism=Nannochloropsis gaditana|type=mRNA|length=2068bp
AAACTTCCGCTTATCACGTTTTCCGAAAGCTTTGCATGGAATAATGGTGA
CTATATTTGTCAAAAGGCACACATGCATTGCGCCATTTCGCTTTGCACCA
TTTTACTTTACTGCGATGTTCTCGTAATATAGAAGTATCTACCTCAAACA
GTACCAAAAAAAGTCGCCTTCAACGTTTAACAAAAAAGACACCGAGGAAG
ACTGATGGTGAAGATTTGATTTAAATGGCCCTGAAAATGAGAAAAGGGTC
ACATTATTATTTTTATCCATTTTTACGGGATGAAGCTGACTCGTGTCTAA
AGCATACACACCTATTTCCCCTACCCCCCATCTAACATATCAGACGCAGT
TGCAGGCGCATGACTGCAACGCCCGCGACATTCAGCTCTTTTACCCCACC
AGGTTCTCCGCCGAGGAAAAGAAACAAAGCGCAAGAGCCGTCACCTTCCC
AGGACCTCCCATGCATCAACAACTACCGCGGCTACGTCCCTCCACCGGGT
ACAACCACCGTCGAGGCGATTGACCTTCCTGTCTTCTTATCTACGCATGG
AGAACGCCAGGCTCCGTTCGCGTTTTTCCGTCAATACATAGGACCCCGAA
AGCCTGTTTTGATACGTGGTACACTCCCAGACCAACAGTGGCGGGCAGGG
ACCATGTGGAAAGACCCTGAGTACTTGAAGAGCAAAGCAGGGAAGGCGCG
AGTACGGGTGGAGACGCGCGAGAACACCCGGGAGGAATACGGCCAGGGAA
AAGAAACGACCATGCTGTTCGAGGAGTTTGTCACGGAGGTAGTGGACAAG
GAGAACCAGCTTCTCTACCTGACAACGCAAGAGCTAGATATCGGTCCGGA
TGACCGACCAGCCCTCATGTCCAGCCCCTTGACGGAGCTGCAGGGGGACC
TTCCCCTCCGCCCCTCCCTCCTTCGGCTCCTTGTGCCTCAGAACATGAAT
TTGTGGATGGGTCGAAGCGGGCGTGGGGAGGGAGGGCGGGAGGGAGAAAG
CAGCAGCGGCCTTCACCACGATTATCACGACAATTTATACATACTTCTGG
GCGGACGCAAGGTTTTCCGCCTGTATGCGCCGTCGGAGGCTCCCAATATG
TACACCTTGGGGAAGCTAAGGTTGGTTCACGGTAACGGTCGTTTGAATTA
CTACGGGCAGCCCTTAACCTGTGCGGATGGGAGGGAGAAGAATGCAGTGA
AAGCCTGGGAGGCGGCCAGAAGGTTGGAGGAAGTGGCGCGACGGTCAGAG
AGGGAAAGCGGGAAGGAGGGAGGGAGGGAGCGCGAGGAGGAGGCGTTGGA
GGCAGCATTGGAGGCCGTTTTGGATACTGAGTTAGAGGGAGAGGAAGGTA
AGGAGGGACAAGAAGAGGAAGAGGAGGAGGACGCGGCGAGCGATCAGGAA
GAATATCCACGGCTCCAAGCGCCACAGTCGGGCTCGCCCCTCCCTCCCTC
CCTCCCTCCCCCGCTTCCTCCTTCCTTGCCAAGCACCACCTTCGCACGAA
CGGGCAAGCCCCCTGCAAATTTCAGTCGCGTGGACCTGACCGCTCCCGAT
GGCGTGGACCCCGCCCTCTTTCCTGCCTTCCCCCGGCACCCTCCTCTGGA
GGTGGAGGTGCAGGAAGGGGAAATGCTTTACCTCCCTGCTGGATGGTTCC
ACCACGTTCAGAGCAAGGGGGGCATACACATGGCCGTGAACTACTGGTTT
CATCCGCCCGACGGGGAGGGAGGAGGGGGGGAAGGGAAGGATAGCGTGTA
CATGGATGGCTTTTGGGAGCGGGATTGGCAGGAACGAATGCAAGGTCGGA
GGGAGCAGGAGGCAGTGGGGGGGGGGGGAGGGAATGACGGTGGGAGTCGA
GAAGGATCAGGCAAAGAGAGGCGAGGGGAGGTTGAGCGGGACGGGAGCGA
GTGAGGGGGAAAGCTGCAGGGGAGGTGCTCATCGGAAGTCATCCAGGTTT
TGATGGCTTTCTACATCCATGCACCGACGCCTGCTCTTTCTCCGAAGCAA
GTTAGCAGGCTGGCACGAAGCAATCTTGCTCGGATGGCCATTAATTCCCT
CTTTCTGTCCTTGATTTT back to topprotein sequence of rna1674 >rna1674-protein ID=rna1674-protein|Name=rna1674|organism=Nannochloropsis gaditana|type=polypeptide|length=313bp
MVSELNISSSEMESLAAQISSLQEEMLARRKEKKEGRERRKRRRRRRSST
TEEGGNEDTEEGGRQEAPPPASTGSPSLPASHSTSTRSPLGGTSRSSSLA
PASSPTPVTHHPRYLHPPSTLSSSSHPSPLPSNASSFLPPSEAGDALSLS
RSTPLGTSTSSSIASSIPSSLPSYHTRSDMPRPASYEHILHQKQQGGEGG
EEGKEDGDKGREGPATSLEKLLLTDIDYQDSDFEEEDSADQELQRLRQEY
IKSVQRAQKAFKARMESMYKCRQDKEDWHLKLLEQHQKAMADFDRRLLLA
TDDQAKRLPIVSP back to topmRNA from alignment at CM002457.1:1233918..1235632- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1674 ID=rna1674|Name=rna1674|organism=Nannochloropsis gaditana|type=mRNA|length=1715bp|location=Sequence derived from alignment at CM002457.1:1233918..1235632- (Nannochloropsis gaditana)
ATGGTGTCGGAACTGAACATCTCCTCGAGTGAGATGGAAAGCCTCGCGGC
GCAAATCTCCAGCTTGCAGGAGGAAATGTTGGCAAGGAGGAAGGAGAAGA
AAGAAGGGAGGGAGCGGCGGAAACGACGCCGACGCCGACGGTCCTCCACC
ACCGAGGAGGGCGGGAACGAGGACACGGAGGAAGGCGGGAGGCAGGAGGG
TCAGACGGCGGCTCCCTCCACCCCACGAAGGCGTGGTGACAACATGGCCA
TCACGTCCTCGGCCGCCCTCTTCAGTCCCGACCGCCGGGCCCTCCTGACC
TCCCTCCCGACCTCCCTTCCCGCCTCCCCTGCCCGCGCTTCGTCCTCCTT
CCCCAGCCCCCCCCCCTGCCAGCACCGGCTCCCCCTCCCTCCCAGCTTCC
CACTCCACCTCGACCCGGTCTCCTCTGGGCGGCACCTCCCGTTCGTCCTC
CCTCGCGCCTGCCTCCTCCCCTACCCCCGTCACCCACCATCCCCGCTATC
TGCACCCCCCTTCCACCCTATCGTCCTCCTCCCACCCTTCCCCCCTGCCC
TCGAACGCCTCCTCCTTCCTTCCTCCGTCCGAGGCCGGAGACGCCCTCTC
GCTCTCGCGCTCGACCCCGTTGGGCACCTCCACCTCCTCCTCCATTGCGT
CCTCCATCCCTTCCTCCCTGCCTTCCTACCACACCCGTTCGGATATGCCG
CGCCCTGCCTCCTACGAGCACATCCTGCACCAGAAGCAGCAGGGTGGGGA
AGGGGGGGAGGAAGGGAAGGAGGACGGGGACAAGGGAAGGGAGGGCCCAG
CGACGAGCCTGGAGAAGCTGCTTTTGACGGATATAGGTGAGGAGCTATGG
AAAAAGGATAGAATATATAATATATATATAGGCGGAAGAAAACCAGGTTG
TAAAGGCGGGATGGAGGTGAAACCTGCGACTCACAGCGATGCTTCCTCCC
TTGCTCCTTTCCTTCTTCCCTTCCCTTCTCCTCCTGTCCAGACTACCAAG
ACAGCGATTTTGAAGAGGAAGATTCTGCGGACCAGGGTGGGTGCTGGGTT
GGATGGGAAAGGTGGCGGGGGGCAGGAGGGGGGGAGGTAGGAAGGGTGTT
TGAGGGGCGCGCGGCCTCTAACCCTAACCCTCAGGGGCGCAGGCCCGTGG
ACGGGGTATAGAATCTGACCCTCTTCTCTTTTTTGGGCCCACGATCCCCT
TCTCTCCCGCAGAATTGCAGCGTCTGCGCCAAGAGTATATCAAGAGCGTG
CAACGGGCGCAGAAGGCATTCAAAGCGGTACGCGTCGAAGCCCTCCCCTG
TTTGCCTAAGTGCATGTGGCAACCCTTCCCTCCCTTCCTGCTCTCCAGTT
TCCCTCTTTCCCGTAGCCCGCCCCTCCCCCTCTCTGTGCAATCAATCATT
TCTTGCCAACACCACACTGCCCGTCTCCGTCTTTCAAGCGATTCTCATCT
CACTCCTCGTCTCTCCCCCTCTCTGCAGCGGATGGAATCCATGTACAAAT
GTCGGCAAGATAAGGAGGACTGGCATCTGAAGCTTCTGGAACAACATCAG
AAGGCGATGGCGGACTTTGATCGACGCTTGCTGTTGGCCACAGACGATCA
GGCGAAGAGGGTGAGTTTGCCTCCTCCTCCCTCCCCTTCTTCCTTCTTCC
CTCTCCTTGTGTTTCTTGCTTTTCGTGGTTATCTGACTCCTAAGCTGCCG
ATTGTTTCACCTTAG back to topCoding sequence (CDS) from alignment at CM002457.1:1233918..1235632- >rna1674 ID=rna1674|Name=rna1674|organism=Nannochloropsis gaditana|type=CDS|length=5652bp|location=Sequence derived from alignment at CM002457.1:1233918..1235632- (Nannochloropsis gaditana)
CTGCCGATTGTTTCACCTTAGCGGATGGAATCCATGTACAAATGTCGGCA
AGATAAGGAGGACTGGCATCTGAAGCTTCTGGAACAACATCAGAAGGCGA
TGGCGGACTTTGATCGACGCTTGCTGTTGGCCACAGACGATCAGGCGAAG
AGGAATTGCAGCGTCTGCGCCAAGAGTATATCAAGAGCGTGCAACGGGCG
CAGAAGGCATTCAAAGCGACTACCAAGACAGCGATTTTGAAGAGGAAGAT
TCTGCGGACCAGGCCCCCCCCCCTGCCAGCACCGGCTCCCCCTCCCTCCC
AGCTTCCCACTCCACCTCGACCCGGTCTCCTCTGGGCGGCACCTCCCGTT
CGTCCTCCCTCGCGCCTGCCTCCTCCCCTACCCCCGTCACCCACCATCCC
CGCTATCTGCACCCCCCTTCCACCCTATCGTCCTCCTCCCACCCTTCCCC
CCTGCCCTCGAACGCCTCCTCCTTCCTTCCTCCGTCCGAGGCCGGAGACG
CCCTCTCGCTCTCGCGCTCGACCCCGTTGGGCACCTCCACCTCCTCCTCC
ATTGCGTCCTCCATCCCTTCCTCCCTGCCTTCCTACCACACCCGTTCGGA
TATGCCGCGCCCTGCCTCCTACGAGCACATCCTGCACCAGAAGCAGCAGG
GTGGGGAAGGGGGGGAGGAAGGGAAGGAGGACGGGGACAAGGGAAGGGAG
GGCCCAGCGACGAGCCTGGAGAAGCTGCTTTTGACGGATATAGATGGTGT
CGGAACTGAACATCTCCTCGAGTGAGATGGAAAGCCTCGCGGCGCAAATC
TCCAGCTTGCAGGAGGAAATGTTGGCAAGGAGGAAGGAGAAGAAAGAAGG
GAGGGAGCGGCGGAAACGACGCCGACGCCGACGGTCCTCCACCACCGAGG
AGGGCGGGAACGAGGACACGGAGGAAGGCGGGAGGCAGGAGGCTGCCGAT
TGTTTCACCTTAGCGGATGGAATCCATGTACAAATGTCGGCAAGATAAGG
AGGACTGGCATCTGAAGCTTCTGGAACAACATCAGAAGGCGATGGCGGAC
TTTGATCGACGCTTGCTGTTGGCCACAGACGATCAGGCGAAGAGGAATTG
CAGCGTCTGCGCCAAGAGTATATCAAGAGCGTGCAACGGGCGCAGAAGGC
ATTCAAAGCGACTACCAAGACAGCGATTTTGAAGAGGAAGATTCTGCGGA
CCAGGCCCCCCCCCCTGCCAGCACCGGCTCCCCCTCCCTCCCAGCTTCCC
ACTCCACCTCGACCCGGTCTCCTCTGGGCGGCACCTCCCGTTCGTCCTCC
CTCGCGCCTGCCTCCTCCCCTACCCCCGTCACCCACCATCCCCGCTATCT
GCACCCCCCTTCCACCCTATCGTCCTCCTCCCACCCTTCCCCCCTGCCCT
CGAACGCCTCCTCCTTCCTTCCTCCGTCCGAGGCCGGAGACGCCCTCTCG
CTCTCGCGCTCGACCCCGTTGGGCACCTCCACCTCCTCCTCCATTGCGTC
CTCCATCCCTTCCTCCCTGCCTTCCTACCACACCCGTTCGGATATGCCGC
GCCCTGCCTCCTACGAGCACATCCTGCACCAGAAGCAGCAGGGTGGGGAA
GGGGGGGAGGAAGGGAAGGAGGACGGGGACAAGGGAAGGGAGGGCCCAGC
GACGAGCCTGGAGAAGCTGCTTTTGACGGATATAGATGGTGTCGGAACTG
AACATCTCCTCGAGTGAGATGGAAAGCCTCGCGGCGCAAATCTCCAGCTT
GCAGGAGGAAATGTTGGCAAGGAGGAAGGAGAAGAAAGAAGGGAGGGAGC
GGCGGAAACGACGCCGACGCCGACGGTCCTCCACCACCGAGGAGGGCGGG
AACGAGGACACGGAGGAAGGCGGGAGGCAGGAGGCTGCCGATTGTTTCAC
CTTAGCGGATGGAATCCATGTACAAATGTCGGCAAGATAAGGAGGACTGG
CATCTGAAGCTTCTGGAACAACATCAGAAGGCGATGGCGGACTTTGATCG
ACGCTTGCTGTTGGCCACAGACGATCAGGCGAAGAGGAATTGCAGCGTCT
GCGCCAAGAGTATATCAAGAGCGTGCAACGGGCGCAGAAGGCATTCAAAG
CGACTACCAAGACAGCGATTTTGAAGAGGAAGATTCTGCGGACCAGGCCC
CCCCCCCTGCCAGCACCGGCTCCCCCTCCCTCCCAGCTTCCCACTCCACC
TCGACCCGGTCTCCTCTGGGCGGCACCTCCCGTTCGTCCTCCCTCGCGCC
TGCCTCCTCCCCTACCCCCGTCACCCACCATCCCCGCTATCTGCACCCCC
CTTCCACCCTATCGTCCTCCTCCCACCCTTCCCCCCTGCCCTCGAACGCC
TCCTCCTTCCTTCCTCCGTCCGAGGCCGGAGACGCCCTCTCGCTCTCGCG
CTCGACCCCGTTGGGCACCTCCACCTCCTCCTCCATTGCGTCCTCCATCC
CTTCCTCCCTGCCTTCCTACCACACCCGTTCGGATATGCCGCGCCCTGCC
TCCTACGAGCACATCCTGCACCAGAAGCAGCAGGGTGGGGAAGGGGGGGA
GGAAGGGAAGGAGGACGGGGACAAGGGAAGGGAGGGCCCAGCGACGAGCC
TGGAGAAGCTGCTTTTGACGGATATAGATGGTGTCGGAACTGAACATCTC
CTCGAGTGAGATGGAAAGCCTCGCGGCGCAAATCTCCAGCTTGCAGGAGG
AAATGTTGGCAAGGAGGAAGGAGAAGAAAGAAGGGAGGGAGCGGCGGAAA
CGACGCCGACGCCGACGGTCCTCCACCACCGAGGAGGGCGGGAACGAGGA
CACGGAGGAAGGCGGGAGGCAGGAGGCTGCCGATTGTTTCACCTTAGCGG
ATGGAATCCATGTACAAATGTCGGCAAGATAAGGAGGACTGGCATCTGAA
GCTTCTGGAACAACATCAGAAGGCGATGGCGGACTTTGATCGACGCTTGC
TGTTGGCCACAGACGATCAGGCGAAGAGGAATTGCAGCGTCTGCGCCAAG
AGTATATCAAGAGCGTGCAACGGGCGCAGAAGGCATTCAAAGCGACTACC
AAGACAGCGATTTTGAAGAGGAAGATTCTGCGGACCAGGCCCCCCCCCCT
GCCAGCACCGGCTCCCCCTCCCTCCCAGCTTCCCACTCCACCTCGACCCG
GTCTCCTCTGGGCGGCACCTCCCGTTCGTCCTCCCTCGCGCCTGCCTCCT
CCCCTACCCCCGTCACCCACCATCCCCGCTATCTGCACCCCCCTTCCACC
CTATCGTCCTCCTCCCACCCTTCCCCCCTGCCCTCGAACGCCTCCTCCTT
CCTTCCTCCGTCCGAGGCCGGAGACGCCCTCTCGCTCTCGCGCTCGACCC
CGTTGGGCACCTCCACCTCCTCCTCCATTGCGTCCTCCATCCCTTCCTCC
CTGCCTTCCTACCACACCCGTTCGGATATGCCGCGCCCTGCCTCCTACGA
GCACATCCTGCACCAGAAGCAGCAGGGTGGGGAAGGGGGGGAGGAAGGGA
AGGAGGACGGGGACAAGGGAAGGGAGGGCCCAGCGACGAGCCTGGAGAAG
CTGCTTTTGACGGATATAGATGGTGTCGGAACTGAACATCTCCTCGAGTG
AGATGGAAAGCCTCGCGGCGCAAATCTCCAGCTTGCAGGAGGAAATGTTG
GCAAGGAGGAAGGAGAAGAAAGAAGGGAGGGAGCGGCGGAAACGACGCCG
ACGCCGACGGTCCTCCACCACCGAGGAGGGCGGGAACGAGGACACGGAGG
AAGGCGGGAGGCAGGAGGCTGCCGATTGTTTCACCTTAGCGGATGGAATC
CATGTACAAATGTCGGCAAGATAAGGAGGACTGGCATCTGAAGCTTCTGG
AACAACATCAGAAGGCGATGGCGGACTTTGATCGACGCTTGCTGTTGGCC
ACAGACGATCAGGCGAAGAGGAATTGCAGCGTCTGCGCCAAGAGTATATC
AAGAGCGTGCAACGGGCGCAGAAGGCATTCAAAGCGACTACCAAGACAGC
GATTTTGAAGAGGAAGATTCTGCGGACCAGGCCCCCCCCCCTGCCAGCAC
CGGCTCCCCCTCCCTCCCAGCTTCCCACTCCACCTCGACCCGGTCTCCTC
TGGGCGGCACCTCCCGTTCGTCCTCCCTCGCGCCTGCCTCCTCCCCTACC
CCCGTCACCCACCATCCCCGCTATCTGCACCCCCCTTCCACCCTATCGTC
CTCCTCCCACCCTTCCCCCCTGCCCTCGAACGCCTCCTCCTTCCTTCCTC
CGTCCGAGGCCGGAGACGCCCTCTCGCTCTCGCGCTCGACCCCGTTGGGC
ACCTCCACCTCCTCCTCCATTGCGTCCTCCATCCCTTCCTCCCTGCCTTC
CTACCACACCCGTTCGGATATGCCGCGCCCTGCCTCCTACGAGCACATCC
TGCACCAGAAGCAGCAGGGTGGGGAAGGGGGGGAGGAAGGGAAGGAGGAC
GGGGACAAGGGAAGGGAGGGCCCAGCGACGAGCCTGGAGAAGCTGCTTTT
GACGGATATAGATGGTGTCGGAACTGAACATCTCCTCGAGTGAGATGGAA
AGCCTCGCGGCGCAAATCTCCAGCTTGCAGGAGGAAATGTTGGCAAGGAG
GAAGGAGAAGAAAGAAGGGAGGGAGCGGCGGAAACGACGCCGACGCCGAC
GGTCCTCCACCACCGAGGAGGGCGGGAACGAGGACACGGAGGAAGGCGGG
AGGCAGGAGGCTGCCGATTGTTTCACCTTAGCGGATGGAATCCATGTACA
AATGTCGGCAAGATAAGGAGGACTGGCATCTGAAGCTTCTGGAACAACAT
CAGAAGGCGATGGCGGACTTTGATCGACGCTTGCTGTTGGCCACAGACGA
TCAGGCGAAGAGGAATTGCAGCGTCTGCGCCAAGAGTATATCAAGAGCGT
GCAACGGGCGCAGAAGGCATTCAAAGCGACTACCAAGACAGCGATTTTGA
AGAGGAAGATTCTGCGGACCAGGCCCCCCCCCCTGCCAGCACCGGCTCCC
CCTCCCTCCCAGCTTCCCACTCCACCTCGACCCGGTCTCCTCTGGGCGGC
ACCTCCCGTTCGTCCTCCCTCGCGCCTGCCTCCTCCCCTACCCCCGTCAC
CCACCATCCCCGCTATCTGCACCCCCCTTCCACCCTATCGTCCTCCTCCC
ACCCTTCCCCCCTGCCCTCGAACGCCTCCTCCTTCCTTCCTCCGTCCGAG
GCCGGAGACGCCCTCTCGCTCTCGCGCTCGACCCCGTTGGGCACCTCCAC
CTCCTCCTCCATTGCGTCCTCCATCCCTTCCTCCCTGCCTTCCTACCACA
CCCGTTCGGATATGCCGCGCCCTGCCTCCTACGAGCACATCCTGCACCAG
AAGCAGCAGGGTGGGGAAGGGGGGGAGGAAGGGAAGGAGGACGGGGACAA
GGGAAGGGAGGGCCCAGCGACGAGCCTGGAGAAGCTGCTTTTGACGGATA
TAGATGGTGTCGGAACTGAACATCTCCTCGAGTGAGATGGAAAGCCTCGC
GGCGCAAATCTCCAGCTTGCAGGAGGAAATGTTGGCAAGGAGGAAGGAGA
AGAAAGAAGGGAGGGAGCGGCGGAAACGACGCCGACGCCGACGGTCCTCC
ACCACCGAGGAGGGCGGGAACGAGGACACGGAGGAAGGCGGGAGGCAGGA
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