EWM29003.1, cds1670 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29003.1 vs. NCBI_GenBank
Match: gi|585111505|gb|EWM29003.1| (hypothetical protein Naga_101720g1 [Nannochloropsis gaditana]) HSP 1 Score: 624.009 bits (1608), Expect = 0.000e+0 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0 Query: 1 MVSELNISSSEMESLAAQISSLQEEMLARRKEKKEGRERRKRRRRRRSSTTEEGGNEDTEEGGRQEAPPPASTGSPSLPASHSTSTRSPLGGTSRSSSLAPASSPTPVTHHPRYLHPPSTLSSSSHPSPLPSNASSFLPPSEAGDALSLSRSTPLGTSTSSSIASSIPSSLPSYHTRSDMPRPASYEHILHQKQQGGEGGEEGKEDGDKGREGPATSLEKLLLTDIDYQDSDFEEEDSADQELQRLRQEYIKSVQRAQKAFKARMESMYKCRQDKEDWHLKLLEQHQKAMADFDRRLLLATDDQAKRLPIVSP 313 MVSELNISSSEMESLAAQISSLQEEMLARRKEKKEGRERRKRRRRRRSSTTEEGGNEDTEEGGRQEAPPPASTGSPSLPASHSTSTRSPLGGTSRSSSLAPASSPTPVTHHPRYLHPPSTLSSSSHPSPLPSNASSFLPPSEAGDALSLSRSTPLGTSTSSSIASSIPSSLPSYHTRSDMPRPASYEHILHQKQQGGEGGEEGKEDGDKGREGPATSLEKLLLTDIDYQDSDFEEEDSADQELQRLRQEYIKSVQRAQKAFKARMESMYKCRQDKEDWHLKLLEQHQKAMADFDRRLLLATDDQAKRLPIVSP Sbjct: 1 MVSELNISSSEMESLAAQISSLQEEMLARRKEKKEGRERRKRRRRRRSSTTEEGGNEDTEEGGRQEAPPPASTGSPSLPASHSTSTRSPLGGTSRSSSLAPASSPTPVTHHPRYLHPPSTLSSSSHPSPLPSNASSFLPPSEAGDALSLSRSTPLGTSTSSSIASSIPSSLPSYHTRSDMPRPASYEHILHQKQQGGEGGEEGKEDGDKGREGPATSLEKLLLTDIDYQDSDFEEEDSADQELQRLRQEYIKSVQRAQKAFKARMESMYKCRQDKEDWHLKLLEQHQKAMADFDRRLLLATDDQAKRLPIVSP 313
BLAST of EWM29003.1 vs. NCBI_GenBank
Match: gi|585103696|gb|EWM22963.1| (serine threonine protein kinase [Nannochloropsis gaditana]) HSP 1 Score: 73.9442 bits (180), Expect = 6.375e-11 Identity = 35/67 (52.24%), Postives = 49/67 (73.13%), Query Frame = 0 Query: 242 ELQRLRQEYIKSVQRAQKAFKARMESMYKCRQDKEDWHLKLLEQHQKAMADFDRRLLLATDDQAKRL 308 E+ RLR +Y K +QR+QKAF R+E+M K RQ+KE+ H KLLE+H + MADF+R++ A +Q RL Sbjct: 1157 EITRLRSDYEKGLQRSQKAFSIRLENMRKSRQEKEESHRKLLEKHMRDMADFERKVRTAEKEQIMRL 1223
BLAST of EWM29003.1 vs. NCBI_GenBank
Match: gi|1210514180|dbj|GAX26962.1| (WNK lysine deficient protein kinase [Fistulifera solaris]) HSP 1 Score: 72.7886 bits (177), Expect = 1.500e-10 Identity = 31/79 (39.24%), Postives = 58/79 (73.42%), Query Frame = 0 Query: 230 DSDFEEEDSADQELQRLRQEYIKSVQRAQKAFKARMESMYKCRQDKEDWHLKLLEQHQKAMADFDRRLLLATDDQAKRL 308 D + +E+ +D EL++L Q++ K++QRA+K + +RM+S+ +C+ ++E+ HLK LE+H+K A+F++RL + Q KR+ Sbjct: 1021 DDAYSDEEESDDELRKLDQDFQKNLQRARKVYDSRMDSLQRCKVEREEQHLKTLEKHEKERAEFEKRLAQEAEQQRKRI 1099
BLAST of EWM29003.1 vs. NCBI_GenBank
Match: gi|1210530255|dbj|GAX11171.1| (WNK lysine deficient protein kinase [Fistulifera solaris]) HSP 1 Score: 64.6994 bits (156), Expect = 6.610e-8 Identity = 27/66 (40.91%), Postives = 50/66 (75.76%), Query Frame = 0 Query: 243 LQRLRQEYIKSVQRAQKAFKARMESMYKCRQDKEDWHLKLLEQHQKAMADFDRRLLLATDDQAKRL 308 L++L Q++ K++QRA+K + +RM+S+ +C+ ++E+ HLK LE+H+K A+F++RL + Q KR+ Sbjct: 1035 LRKLDQDFQKNLQRARKVYDSRMDSLQRCKVEREEQHLKTLEKHEKERAEFEKRLAQEAEQQRKRI 1100
BLAST of EWM29003.1 vs. NCBI_GenBank
Match: gi|397614966|gb|EJK63127.1| (hypothetical protein THAOC_16234 [Thalassiosira oceanica]) HSP 1 Score: 62.003 bits (149), Expect = 6.510e-7 Identity = 25/72 (34.72%), Postives = 52/72 (72.22%), Query Frame = 0 Query: 237 DSADQELQRLRQEYIKSVQRAQKAFKARMESMYKCRQDKEDWHLKLLEQHQKAMADFDRRLLLATDDQAKRL 308 D+ +E+++L QE+ K +QRA+K++ RM+++++ +++ E H LE+H+K +F++R+ LA ++Q +RL Sbjct: 1111 DAETEEIRKLEQEFEKKLQRAKKSYGTRMDNLHRSKEEAEAQHRHTLEKHEKEKMEFEKRVRLAEEEQTRRL 1182 The following BLAST results are available for this feature:
BLAST of EWM29003.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|