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Properties
| Property Name | Value |
|---|
| Product | ribosome biogenesis regulatory protein |
| Orig transcript id | gnl|cribi|Naga_100071g22.7942.mrna |
| Orig protein id | gnl|cribi|Naga_100071g22.7942 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1172272..1174066 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1652 ID=rna1652|Name=rna1652|organism=Nannochloropsis gaditana|type=mRNA|length=3241bp
AGGGCAGTGCCCCTTGAAAGGTAGAAATTGTCATGAGTTCCCTCCCGTCG
CTGTATCGGATTTTCTGGCCTGACATCGACTATGGTCCTCGACGGCGGCT
CCTGTGAAATGCTCGGTACACAGCGACCATATTTCAGTTTCTGGATCTCA
TCCAGAAGTCGTCGTTTGTGTGCGGGATTGTAAATGAGTAAAGTATCCTC
CAAAGCGGACGAAGAGCGCGAGCATGCGTGGTATTGGTGCGTCCGGTGGT
ATGATTTCGATTCGGGGGATGTCCGTCCCGCCGTCGCTACCTCATGATTA
TAAATATGGAACAAGGTATGCCCGTCAACGCGCGCATTCAAGAAGTTTCC
CTTGTATTGAGGCAGTTTGACCACGTGCAACAGCCAGTCCAGAACTTGCG
CGCTACTCCACGAGTGCGGCCCACCGGGGAAACTTCTGGAAATGTTTGGT
TCGGAGCGTTTGTGTGTGGGGGAAGAGGTTGCTGGACGTTTAGGAGCCGT
CCTTGCTGGAAGCCGCTGGTTCCACTGGACAGATCGATGCGAAGGGGGGG
ACGGAGGTCGATGGGTTAAGGCTACTGTCCCTGAGGACGTGGTGGACTTG
ATGTCGAAGTTCTGGTTGACGAGAAAGACAGGGAGGAACCCGAAACTTCG
GTAACACTTTTTATCAGGCACAGGGAAGGCAGCAGGGTCACGTACAGCGT
CAATAGCCAGGACAAGCGCTTGAAAGGGTGGGCAGTGGCCTTCGCGAAGT
GCCTTTCGCAGGACAGCACGTTCCGCCGACCGTGTTGAGAATCCACTTTC
TTCGCCTGAGCTGCAGCTGAGAAACACGTCTCCGTTATTGCATAGCAAGC
TAGCTCCAACGGCTTCAGGAAGGGTAGCTGCTGATTGACGGGCTCGCTTA
CAGGCTTGCATCGCCGCCTCGACCAGGTCTTCCAGCGTGATGTCGTCGTC
GGTGCCACCCGCCGGGCCCATGTCAGAAACATGTTGTGCTGTCGATGACA
GGGATTGTGCGGAAGGTATTCTATGTTGGCAGCATCTTGAAAACGTCGCT
GGCTTGGGTAATTGCATTGTATTTTTTGAAATGCCTGCTCGGGCGTGCCC
AAGCGCTGGGGTAGGTTGGCCGACCTGTCCTTTGTCGTGATTATAGATTT
TCACATCGATGCGCTCGTGGTCGCGATGGGTGAAGCATTTATTATGCCGG
ACAGGAGATGGACTGCGACTCGTGCTTATGCTGACCACAATCTTATCCTT
GTCATCCCTTGCGTCATGGCGGCGTTGGCAGTGAGCTTGTTCTATTTCGT
TGTAGATGGGCCAACGTCGAAGCCGTGTTGGGGACGGCTTCCGGACAGTG
TAGACGTGAAAAGGCTGGTCGGGCATGGCAAGCAAGTCTGTTACACTAGC
TTCTGTTGACAAGTGGGAAGGAACATTTTAGATCGATGAAAATGGACCGG
ACGAAAAAAGGAAAAAGGACGTGAAAGCACGTAACGGGCGGCACTGGGTG
AGACCGTAAATTTGAAAAAATGAAGGCCCCGGGCTGGTCATCATCATGCC
TTTGTTTCGAAATTCTGCCTCGTCTTTTCCTCCAGCTTGGTGCGCGCATA
TAATGCATACATGTTTTCATGTCAAAAAGCTGTTTATATCTACACAGGTT
TCAGCAAATTATATTCGAGGAACGGTCTCTAGCAGCTCTCAGCTTGAATG
GTAGCATCACCGTGGTTTCACAGACATGCTTCATTTCTCCACTAGAGCAA
GAAAACGACGGCCTCTATTAGCACTCATCACTACCAGCGTGGCAATTGCA
TGTTATGCCGCGACACCAATCCCGTGGGAAGCGCGTGAAAAAGGTAACGA
TTTTGCAGGCTCTACTTCGCCCTTGAGCATCGTCGGTCCAGGCGGGGAAG
ATGGTGCGTATTCCTTCGACACCAAGGTACGCACGCTTGAGATCCTGAAG
CATCTGCGACAAGGAGACGTGCCTTTGGAAGTGCTACACGAAATTTTGCC
CGGAAACGGTAGCGTAGATTTTCAAGTGAGCATTAAAGCCTGGGATGGCA
GTAACTTTACCTGTGCACCCATTCCTCAAGAGTCAGAGCACGACAAGGAA
GTTGACAACATCGGATCAGCACATATATTCAAAGACAAGGCCCCCGAAGC
GCTGAACAAGAACCTGGATAATACCTGTGCCATTTTGAACAAGGATTACT
GGAGCTACGAGTGGTGCCACCGTCGGGAAGTGCGTCAGTTCCACCTGAAC
ACTCCCGTCGACACAGAGGAACCGAGCGCCGAGCCTGTCCGGGACCCTGA
TTGGAGCTTGGGAAAATATGCGAAGACGGAGGTCCTGACTCCGGAAGGGG
GGGATCGGGGGGCGATGGCCGTGGTCGATTACTTTGTGGGTGGACAGCTT
TGCCACGAAACAGGACAAGGCCGCCAAACCATTGTGGAGTTCTACTGTTG
CGCCGACGGCTCCCTGCCTTCCGAGGTCCAGGCGCGCATCGCTGACGTAA
CCCGTGTCCCGTACGCGGTGGCCCAGCTCATGTCCGTGGAGGAGATCGCA
ACCTGCAAGTACGCCATCATAGTCTGCTCGCCCCTCCTTTGTGACGCCCA
GCAACTTGCTACTCGCGCGACGCTCACTGGACCGGCCGCCGCCTCCCAAG
CCTTGCAGTTGCTGGAGCCCATGGCTTCCCAGTGCTTGCGGCGCCATGAC
GGGTATTGGTCGTACGAATTTTGTTACAACGGCTCCATCCGCCAATTCCA
CACCGTGGCCGTGCGGGAAGCGACGGGCAATGTGGTGAGTAAGGTGGAGA
GTGAGTACATAATCGGAACAAGCCAGCCGGTGCCAGAGGGATTCAAGGAG
GAGGACCACATCATCCTTAACAAGGAGGAGGAGGGCGGGGATCCCTCCCT
CTTCCAGATGGATTACACGGGCGGGACCGTGTGTGACTTGACGGGGGAAG
TGCGGGCGACGACTGTACAATTTATCTGTGGGGAAGGACCCGTCGATGTC
TTTGTCTCCATCAAGGAAGACCGCTCCTGTCACTATAAAGCAGTCATTTC
TACACCCAAACTCTGCCGGCATCCGTCTTTCCGCAAAGAGAAGCCACCCA
CGCACGTGGTACACTGCAAGCGAGGACAGTAAGAATGCTTTGCCGGTTGA
AAATAATGACAATAGCCATCAAACGGGAAAGTGAAAGAGGAAACGAACCA
TGCGTCGTTACAACCTATCAGCTTTATTCCCAACAGTTCTT back to topprotein sequence of rna1652 >rna1652-protein ID=rna1652-protein|Name=rna1652|organism=Nannochloropsis gaditana|type=polypeptide|length=371bp
MRATAATVVKAVDVAPGAYNGANSAHKDKPDDLLYDLHHLAAVDSHPVDL
EGFQSDPEKYLWESATFGVQGIVNRLFELPYEQSNTGPVVTLPGATTYLP
RAKPLPEARQATRWEKFAKEKGITKKKRSRTVWDEDAQEWRPRWGYKRAK
NGVEDAAIVEVKPGEDPNVDPWTQAQEAKSARVAKNLQQQAKNKGMGRGT
SILAPGTKPGKRVGKREREAMAAATAAGPPAPVYGLPVDLPATKKHVQAP
GGPGAASEEGGKAVPKKRGKVAGLKALEVAQQSTASLGKFDAKLAGEPEK
KVKKVRKVAPVADSKSLVEESKRMNSVLSTVLRPKGTGPGTGKSHVNIDA
LEPERAGYSRKKGRGAVKRKK back to topmRNA from alignment at CM002457.1:1172272..1174066- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1652 ID=rna1652|Name=rna1652|organism=Nannochloropsis gaditana|type=mRNA|length=1795bp|location=Sequence derived from alignment at CM002457.1:1172272..1174066- (Nannochloropsis gaditana)
CGTTTTTGGTTTTATCTTTTGCCAGCACTCAAGCCGCCCGCCACACAACA
CTTTGGCAGGGCCTCATGCGTGCCACTGCGGCCACGGTAGTTAAAGCCGT
CGACGTTGCCCCTGGGGCGTACAACGGCGCCAATAGCGCTCATAAGGACA
AACCAGATGACCTTCTCTACGATCTGCATCACTTGGCCGCTGTGGACTCC
CACCCGGTAAGATGCCTGTAGCATAGCGGCAAGATACTGATCTATCCTGC
GCCGTTGTCTTCTTGTTTGGACTGTCTAGGACTGACTAACGTGTAGCAGA
TGACCCCGATGGTCTATAACGCTTGTGTAATGAATGCTTAGACACCTAGT
GCGCTTTTTTACGAGATACCTGTGCCGTCAAAGAGGAATGGTGTCTCGAC
AATCTGCTTCGATGAGCACATCTCGTAAAACGCAGGAGAGGAGTAGGAAA
CTCCGTGGCTCCTGGTTTTTGTGATTTATCTTACACCTAGCATCTTGGAA
TCGGATCGATTCATTCACCCTTCCCATAGGTGGATCTTGAAGGATTTCAG
TCGGATCCCGAGAAATACTTGTGGGAAAGCGCCACCTTTGGCGTGCAAGG
AATCGTAAATCGCCTGTTTGAGCTCCCATACGAGCAGTCCAACACAGGAC
CTGTCGTAACCCTCCCTGGTGCCACCACATACTTGCCTCGGGCGAAGCCC
TTGCCGGAAGCGAGGCAAGCGACCCGGTGGGAGAAATTCGCCAAAGAGAA
AGGCATTACCAAGAAGAAACGGTCCCGGACGGTGTGGGACGAGGACGCTC
AGGAATGGCGGCCTCGTTGGGGTTACAAACGTGCCAAAAATGGCGTGGAG
GACGCGGCGATCGTCGAAGTCAAGCCCGGGGAGGATCCTAACGTGGATCC
ATGGACGCAGGCCCAGGAGGCGAAGAGCGCCCGCGTGGCCAAGAACCTCC
AGCAACAGGCAAAGAACAAAGGGATGGGACGTGGAACAAGTATCCTAGCC
CCAGGCACAAAGCCGGGGAAACGGGTGGGAAAAAGGGAGCGGGAAGCGAT
GGCGGCCGCCACTGCCGCGGGCCCGCCTGCCCCTGTGTACGGATTACCAG
TAGACCTGCCGGCGACAAAGAAGCACGTGCAGGCACCTGGAGGACCTGGG
GCTGCCTCGGAAGAGGGTGGAAAGGCAGTGCCAAAGAAGAGAGGTAAAGT
GGCAGGTCTCAAGGCGTTGGAGGTGGCGCAGCAGTCCACGGCTTCGTTGG
GGAAATTTGATGCAAAATTGGCAGGAGAGCCCGAGAAGAAAGTGAAAAAA
GTCCGGAAGGTGGCTCCCGTGGCGGACAGCAAAAGCTTAGTGGAAGAGTC
GAAACGCATGAATTCTGTGTTGTCGACCGTCCTGCGACCCAAGGGAACGG
GGCCTGGGACTGGAAAGTCGCACGTGAACATCGACGCGCTCGAGCCGGAA
AGGGCGGGGTATTCGCGGAAGAAGGGCCGCGGGGCGGTCAAGCGGAAGAA
GTAAAATGGTGCTGTCTAGAAATACGTCACGATAAAAACGCCAGCTGGAG
AAGGACGATGGAGGGGACGCTGTGTGGTGTAGGGGATGGGCAGGGGCAAG
CGGGAGACGCTCCCTCGGACAGGGCCTGGATGACGGCTTGTGTATCTCGA
GGGGTTGAACGAGAATAATGAGATGCTGTGAAGGCGCCATGCAAGTGTAT
GGAGGCGGAAGTGCACATGCGGAGACGGGGGGGGGGGATAAAACGATTGT
TTGCCAAATTTGACGAAACATTCAAATACGCGCAAGACGTGACGG back to topCoding sequence (CDS) from alignment at CM002457.1:1172272..1174066- >rna1652 ID=rna1652|Name=rna1652|organism=Nannochloropsis gaditana|type=CDS|length=2232bp|location=Sequence derived from alignment at CM002457.1:1172272..1174066- (Nannochloropsis gaditana)
GTGGATCTTGAAGGATTTCAGTCGGATCCCGAGAAATACTTGTGGGAAAG
CGCCACCTTTGGCGTGCAAGGAATCGTAAATCGCCTGTTTGAGCTCCCAT
ACGAGCAGTCCAACACAGGACCTGTCGTAACCCTCCCTGGTGCCACCACA
TACTTGCCTCGGGCGAAGCCCTTGCCGGAAGCGAGGCAAGCGACCCGGTG
GGAGAAATTCGCCAAAGAGAAAGGCATTACCAAGAAGAAACGGTCCCGGA
CGGTGTGGGACGAGGACGCTCAGGAATGGCGGCCTCGTTGGGGTTACAAA
CGTGCCAAAAATGGCGTGGAGGACGCGGCGATCGTCGAAGTCAAGCCCGG
GGAGGATCCTAACGTGGATCCATGGACGCAGGCCCAGGAGGCGAAGAGCG
CCCGCGTGGCCAAGAACCTCCAGCAACAGGCAAAGAACAAAGGGATGGGA
CGTGGAACAAGTATCCTAGCCCCAGGCACAAAGCCGGGGAAACGGGTGGG
AAAAAGGGAGCGGGAAGCGATGGCGGCCGCCACTGCCGCGGGCCCGCCTG
CCCCTGTGTACGGATTACCAGTAGACCTGCCGGCGACAAAGAAGCACGTG
CAGGCACCTGGAGGACCTGGGGCTGCCTCGGAAGAGGGTGGAAAGGCAGT
GCCAAAGAAGAGAGGTAAAGTGGCAGGTCTCAAGGCGTTGGAGGTGGCGC
AGCAGTCCACGGCTTCGTTGGGGAAATTTGATGCAAAATTGGCAGGAGAG
CCCGAGAAGAAAGTGAAAAAAGTCCGGAAGGTGGCTCCCGTGGCGGACAG
CAAAAGCTTAGTGGAAGAGTCGAAACGCATGAATTCTGTGTTGTCGACCG
TCCTGCGACCCAAGGGAACGGGGCCTGGGACTGGAAAGTCGCACGTGAAC
ATCGACGCGCTCGAGCCGGAAAGGGCGGGGTATTCGCGGAAGAAGGGCCG
CGGGGCGGTCAAGCGGAAGAAGTAAATGCGTGCCACTGCGGCCACGGTAG
TTAAAGCCGTCGACGTTGCCCCTGGGGCGTACAACGGCGCCAATAGCGCT
CATAAGGACAAACCAGATGACCTTCTCTACGATCTGCATCACTTGGCCGC
TGTGGACTCCCACCCGGTGGATCTTGAAGGATTTCAGTCGGATCCCGAGA
AATACTTGTGGGAAAGCGCCACCTTTGGCGTGCAAGGAATCGTAAATCGC
CTGTTTGAGCTCCCATACGAGCAGTCCAACACAGGACCTGTCGTAACCCT
CCCTGGTGCCACCACATACTTGCCTCGGGCGAAGCCCTTGCCGGAAGCGA
GGCAAGCGACCCGGTGGGAGAAATTCGCCAAAGAGAAAGGCATTACCAAG
AAGAAACGGTCCCGGACGGTGTGGGACGAGGACGCTCAGGAATGGCGGCC
TCGTTGGGGTTACAAACGTGCCAAAAATGGCGTGGAGGACGCGGCGATCG
TCGAAGTCAAGCCCGGGGAGGATCCTAACGTGGATCCATGGACGCAGGCC
CAGGAGGCGAAGAGCGCCCGCGTGGCCAAGAACCTCCAGCAACAGGCAAA
GAACAAAGGGATGGGACGTGGAACAAGTATCCTAGCCCCAGGCACAAAGC
CGGGGAAACGGGTGGGAAAAAGGGAGCGGGAAGCGATGGCGGCCGCCACT
GCCGCGGGCCCGCCTGCCCCTGTGTACGGATTACCAGTAGACCTGCCGGC
GACAAAGAAGCACGTGCAGGCACCTGGAGGACCTGGGGCTGCCTCGGAAG
AGGGTGGAAAGGCAGTGCCAAAGAAGAGAGGTAAAGTGGCAGGTCTCAAG
GCGTTGGAGGTGGCGCAGCAGTCCACGGCTTCGTTGGGGAAATTTGATGC
AAAATTGGCAGGAGAGCCCGAGAAGAAAGTGAAAAAAGTCCGGAAGGTGG
CTCCCGTGGCGGACAGCAAAAGCTTAGTGGAAGAGTCGAAACGCATGAAT
TCTGTGTTGTCGACCGTCCTGCGACCCAAGGGAACGGGGCCTGGGACTGG
AAAGTCGCACGTGAACATCGACGCGCTCGAGCCGGAAAGGGCGGGGTATT
CGCGGAAGAAGGGCCGCGGGGCGGTCAAGCGGAAGAAGTAAATGCGTGCC
ACTGCGGCCACGGTAGTTAAAGCCGTCGACGTTGCCCCTGGGGCGTACAA
CGGCGCCAATAGCGCTCATAAGGACAAACCAGATGACCTTCTCTACGATC
TGCATCACTTGGCCGCTGTGGACTCCCACCCG back to top
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