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Properties
| Property Name | Value |
|---|
| Product | Mannose-6-phosphate receptor binding domain protein |
| Orig transcript id | gnl|cribi|Naga_100071g21.7943.mrna |
| Orig protein id | gnl|cribi|Naga_100071g21.7943 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1166918..1170158 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1651 ID=rna1651|Name=rna1651|organism=Nannochloropsis gaditana|type=mRNA|length=2693bp
AGAGTTAGACAAGAGGGAGCGGCCAAAGCCGGCCTCTCACTTGAGCACGA
ACGCATTGGTCTCATTCTCGACGAATCCCACACACAAAGGCTGCCGTATG
TGTATATGACCGCGACTTGGCAGACGGGCAGCTGGAGTCCTGGAAACTGT
TGGTGCCTTGAGCTGTGATCGCTTTTCGTCCAGTTCTGTGACCCACTTCC
AGCATGGACGAACAAGCAGGCTTAGTCAAGATCATCCAATGCATGAATAT
GTATGGGAACATGGAGGATGTGCAGGAGAAGGGTTGTGTAGAGATCAACC
AGCTGTGCGACTTTCCTCCAATCCGGGAGCTTCTTTGCCGAGTCGGGGCT
GTTCAGGCCTTGTTGGACGCGCTTAAAACATTTCCCGTTTCCATTGGTGT
TCAATACGCGGGATGTCAAGCCCTTGCAAAACTCAGCGTAGATTGCAATG
AATTGCGCCTCCACTTGGGTGTTTCAGGTGCAGGGACCGTTTTGGTGGAG
GCCCTTGCCCGTTTCTCTGGGGAGGACGCTAACCTTCAAAAATCACTGGG
AAGCCAGGCACTGCCGCACTGCGAAGGCGTCCGAAATTTTTGTCTCGCGG
CAATCTTCCAACTTCTGCAAGTGGAAGAAAACATGGTCCCTTTGCTGCGC
GCCAATGCCTGGGAGACAGTGGTCAACGCCATGGCGGCCTTTCCTGAGGA
CAATGACTTGACGCTCTCGGGGTGCCGCCTGTTGATCGTGATGGCGGAAG
GACTCATCAAGTCCGGGACGGCAAACACGAAAGCCATGGACGTGATCATG
AGGCAGTCCCCCGCGTGCCAAGTGGTGTTTAGGGCGTCCACCCGCGCCTT
GCGTCACGTGGAGAACGCGGCCCACCAGGCCGTCGCCTTGTCCCCCTTGG
TCCAAGACTTCCTGCTCCAGGGGGCTTGGCTGACCTCGAGTGCCCTGGCT
GCGCTCGCCAGTCTTTCCTTTGAGAATGCCAGGCAGCTGGTGGATCTGGG
GGCGTGCGAACATTTGCGGTCATTGATGCGGCTGTGCACGAATGACGTGG
TGGTGGAATGGACCGTCCGGGCGCTTGCCGAGATTGCACTCTCCCTCCGT
GGCGGCTTTTCCCCGGGGGCAAAGGCGGACAGTCAGGAGCATGCATGGCA
TACAGGCATGAAAGACAGCAGCACGAATTGCCAGGCCGTCGTGGCCGCCG
TGTCCATTGCGCCCCAGAACCAAAACGTCCAATTTGCCGGGTGCTACGCG
GTCGCCACCCTGGCCACAGACTGCCGCAAGCACCAGCTTCAATTCCACGC
CAGCCACGCCGTGGAAATGATTTTGCAGGCCTTGCGCTTGTTTCCGGACG
CGGACCACGTGCAAGAATGGGGCCATCGGGCCCTGGCGGTCTTGGCCTCC
GACTGCCCCGAGAACCAAAGCGCCATCCTCCAAAATCACGGCCACGTGCT
GGTGACTTCCACCCTCTCCCGCTTCCTCCACCTGGCCCGCGTCTATTTTT
CCGCCTGTTACGTGATCGTCAACCTCGCCCAGACGAACCTGGAGGCTCGG
AAAGCCTTGGGCACGGCGGGGGCCTGTCAGCAGGTGGTAAGAGGATTCGC
GGGCCCGTGCGGGAGCGATTTAGATGTGCTGGAGTGGTCCTGTCGGGCCT
TGGGCGACCTGGCCAACGGCTGTCGCGAAAACCAGGAGCGAATACGGCTC
GAGGGGGGTTGTACGAAGGTCCTGGAGACCCTGAGCCTCCTCAAAGAGAC
CTCGCCAGTGCACGTGTCTGGGTGCTACGCACTGACCCACCTGATAGCCG
GGAACCGGGACGCTCAAGTCCAAGTCGGCGCCTCGCACGGTTGCGAAAAA
CTGGTCAACGTGATCCTGAAGTCGTTACCGGACTCGCAGGCGCGACTATG
GGCCTTCCGGGCCTTGCTGACCCTGACGGACACCTCGCTGAGTGTGGACA
GGATAGTGGAAATGGGGACGGTGCCGGAGATGATGGAAGTGATCAACACC
TGGGTGGGAAAGATGGAGGCCAAGGCGGAAAGCAACGGGGGTAGAGATCG
AGAGGAAGAGGGGCGAGAAAAGGCCCAAAGTCGGGGAAAAGAAGGGAGCA
ATGGGGGCGATCGATTGGGAAATGCCCAGGAGGAAGGCGGCGACGCTGCG
AGAAGAAGGAATAGGATCAGTAAATCGGGAACCTGACAGACACAATCGCA
GGAGTTGACCTGCTATCCTCTTTGCAGTGGGTTGTGTCATGAAAGGGGAA
CGGGAACGAGACACATGCGAGTCGACCCCGTCGAACCCTCCAGTGGATAT
GGATATCAACCTCTAGTGGATATGGATATACACATCTGGAAGATATGGAT
ATATACCTCTAGTGGATATGGATATATATCCCCAGGCGGGTTTCTGTGGG
AGAGCGTGCGCGTGCGTGTGTGTACTTTTATGTTCCCTGTGCTTCGGACA
AATGTTAGACTGTCCGCTCGATGTACATGCCGAAAATACAGGCAACGCGA
GTCGGGGAGGTCCCCGGACAGGGCAAGGGCAGGGTAGGCGGGACACCCGG
GAAGCGCTATTGCACAGTCCACAAGTTGTTGAAAATAGGAAAACAGATCC
TGGTACATCACTCCACTTTTCAAAATATTTTATACAGTGGACGCCAACAG
GGGAGGCCACAAAAGTAACAACGTTCTGCAAGATCACACCACA back to topprotein sequence of rna1651 >rna1651-protein ID=rna1651-protein|Name=rna1651|organism=Nannochloropsis gaditana|type=polypeptide|length=468bp
MLHFSTRARKRRPLLALITTSVAIACYAATPIPWEAREKGNDFAGSTSPL
SIVGPGGEDGAYSFDTKVRTLEILKHLRQGDVPLEVLHEILPGNGSVDFQ
VSIKAWDGSNFTCAPIPQESEHDKEVDNIGSAHIFKDKAPEALNKNLDNT
CAILNKDYWSYEWCHRREVRQFHLNTPVDTEEPSAEPVRDPDWSLGKYAK
TEVLTPEGGDRGAMAVVDYFVGGQLCHETGQGRQTIVEFYCCADGSLPSE
VQARIADVTRVPYAVAQLMSVEEIATCKYAIIVCSPLLCDAQQLATRATL
TGPAAASQALQLLEPMASQCLRRHDGYWSYEFCYNGSIRQFHTVAVREAT
GNVVSKVESEYIIGTSQPVPEGFKEEDHIILNKEEEGGDPSLFQMDYTGG
TVCDLTGEVRATTVQFICGEGPVDVFVSIKEDRSCHYKAVISTPKLCRHP
SFRKEKPPTHVVHCKRGQ back to topmRNA from alignment at CM002457.1:1166918..1170158- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1651 ID=rna1651|Name=rna1651|organism=Nannochloropsis gaditana|type=mRNA|length=3241bp|location=Sequence derived from alignment at CM002457.1:1166918..1170158- (Nannochloropsis gaditana)
AGGGCAGTGCCCCTTGAAAGGTAGAAATTGTCATGAGTTCCCTCCCGTCG
CTGTATCGGATTTTCTGGCCTGACATCGACTATGGTCCTCGACGGCGGCT
CCTGTGAAATGCTCGGTACACAGCGACCATATTTCAGTTTCTGGATCTCA
TCCAGAAGTCGTCGTTTGTGTGCGGGATTGTAAATGAGTAAAGTATCCTC
CAAAGCGGACGAAGAGCGCGAGCATGCGTGGTATTGGTGCGTCCGGTGGT
ATGATTTCGATTCGGGGGATGTCCGTCCCGCCGTCGCTACCTCATGATTA
TAAATATGGAACAAGGTATGCCCGTCAACGCGCGCATTCAAGAAGTTTCC
CTTGTATTGAGGCAGTTTGACCACGTGCAACAGCCAGTCCAGAACTTGCG
CGCTACTCCACGAGTGCGGCCCACCGGGGAAACTTCTGGAAATGTTTGGT
TCGGAGCGTTTGTGTGTGGGGGAAGAGGTTGCTGGACGTTTAGGAGCCGT
CCTTGCTGGAAGCCGCTGGTTCCACTGGACAGATCGATGCGAAGGGGGGG
ACGGAGGTCGATGGGTTAAGGCTACTGTCCCTGAGGACGTGGTGGACTTG
ATGTCGAAGTTCTGGTTGACGAGAAAGACAGGGAGGAACCCGAAACTTCG
GTAACACTTTTTATCAGGCACAGGGAAGGCAGCAGGGTCACGTACAGCGT
CAATAGCCAGGACAAGCGCTTGAAAGGGTGGGCAGTGGCCTTCGCGAAGT
GCCTTTCGCAGGACAGCACGTTCCGCCGACCGTGTTGAGAATCCACTTTC
TTCGCCTGAGCTGCAGCTGAGAAACACGTCTCCGTTATTGCATAGCAAGC
TAGCTCCAACGGCTTCAGGAAGGGTAGCTGCTGATTGACGGGCTCGCTTA
CAGGCTTGCATCGCCGCCTCGACCAGGTCTTCCAGCGTGATGTCGTCGTC
GGTGCCACCCGCCGGGCCCATGTCAGAAACATGTTGTGCTGTCGATGACA
GGGATTGTGCGGAAGGTATTCTATGTTGGCAGCATCTTGAAAACGTCGCT
GGCTTGGGTAATTGCATTGTATTTTTTGAAATGCCTGCTCGGGCGTGCCC
AAGCGCTGGGGTAGGTTGGCCGACCTGTCCTTTGTCGTGATTATAGATTT
TCACATCGATGCGCTCGTGGTCGCGATGGGTGAAGCATTTATTATGCCGG
ACAGGAGATGGACTGCGACTCGTGCTTATGCTGACCACAATCTTATCCTT
GTCATCCCTTGCGTCATGGCGGCGTTGGCAGTGAGCTTGTTCTATTTCGT
TGTAGATGGGCCAACGTCGAAGCCGTGTTGGGGACGGCTTCCGGACAGTG
TAGACGTGAAAAGGCTGGTCGGGCATGGCAAGCAAGTCTGTTACACTAGC
TTCTGTTGACAAGTGGGAAGGAACATTTTAGATCGATGAAAATGGACCGG
ACGAAAAAAGGAAAAAGGACGTGAAAGCACGTAACGGGCGGCACTGGGTG
AGACCGTAAATTTGAAAAAATGAAGGCCCCGGGCTGGTCATCATCATGCC
TTTGTTTCGAAATTCTGCCTCGTCTTTTCCTCCAGCTTGGTGCGCGCATA
TAATGCATACATGTTTTCATGTCAAAAAGCTGTTTATATCTACACAGGTT
TCAGCAAATTATATTCGAGGAACGGTCTCTAGCAGCTCTCAGCTTGAATG
GTAGCATCACCGTGGTTTCACAGACATGCTTCATTTCTCCACTAGAGCAA
GAAAACGACGGCCTCTATTAGCACTCATCACTACCAGCGTGGCAATTGCA
TGTTATGCCGCGACACCAATCCCGTGGGAAGCGCGTGAAAAAGGTAACGA
TTTTGCAGGCTCTACTTCGCCCTTGAGCATCGTCGGTCCAGGCGGGGAAG
ATGGTGCGTATTCCTTCGACACCAAGGTACGCACGCTTGAGATCCTGAAG
CATCTGCGACAAGGAGACGTGCCTTTGGAAGTGCTACACGAAATTTTGCC
CGGAAACGGTAGCGTAGATTTTCAAGTGAGCATTAAAGCCTGGGATGGCA
GTAACTTTACCTGTGCACCCATTCCTCAAGAGTCAGAGCACGACAAGGAA
GTTGACAACATCGGATCAGCACATATATTCAAAGACAAGGCCCCCGAAGC
GCTGAACAAGAACCTGGATAATACCTGTGCCATTTTGAACAAGGATTACT
GGAGCTACGAGTGGTGCCACCGTCGGGAAGTGCGTCAGTTCCACCTGAAC
ACTCCCGTCGACACAGAGGAACCGAGCGCCGAGCCTGTCCGGGACCCTGA
TTGGAGCTTGGGAAAATATGCGAAGACGGAGGTCCTGACTCCGGAAGGGG
GGGATCGGGGGGCGATGGCCGTGGTCGATTACTTTGTGGGTGGACAGCTT
TGCCACGAAACAGGACAAGGCCGCCAAACCATTGTGGAGTTCTACTGTTG
CGCCGACGGCTCCCTGCCTTCCGAGGTCCAGGCGCGCATCGCTGACGTAA
CCCGTGTCCCGTACGCGGTGGCCCAGCTCATGTCCGTGGAGGAGATCGCA
ACCTGCAAGTACGCCATCATAGTCTGCTCGCCCCTCCTTTGTGACGCCCA
GCAACTTGCTACTCGCGCGACGCTCACTGGACCGGCCGCCGCCTCCCAAG
CCTTGCAGTTGCTGGAGCCCATGGCTTCCCAGTGCTTGCGGCGCCATGAC
GGGTATTGGTCGTACGAATTTTGTTACAACGGCTCCATCCGCCAATTCCA
CACCGTGGCCGTGCGGGAAGCGACGGGCAATGTGGTGAGTAAGGTGGAGA
GTGAGTACATAATCGGAACAAGCCAGCCGGTGCCAGAGGGATTCAAGGAG
GAGGACCACATCATCCTTAACAAGGAGGAGGAGGGCGGGGATCCCTCCCT
CTTCCAGATGGATTACACGGGCGGGACCGTGTGTGACTTGACGGGGGAAG
TGCGGGCGACGACTGTACAATTTATCTGTGGGGAAGGACCCGTCGATGTC
TTTGTCTCCATCAAGGAAGACCGCTCCTGTCACTATAAAGCAGTCATTTC
TACACCCAAACTCTGCCGGCATCCGTCTTTCCGCAAAGAGAAGCCACCCA
CGCACGTGGTACACTGCAAGCGAGGACAGTAAGAATGCTTTGCCGGTTGA
AAATAATGACAATAGCCATCAAACGGGAAAGTGAAAGAGGAAACGAACCA
TGCGTCGTTACAACCTATCAGCTTTATTCCCAACAGTTCTT back to topCoding sequence (CDS) from alignment at CM002457.1:1166918..1170158- >rna1651 ID=rna1651|Name=rna1651|organism=Nannochloropsis gaditana|type=CDS|length=1407bp|location=Sequence derived from alignment at CM002457.1:1166918..1170158- (Nannochloropsis gaditana)
ATGCTTCATTTCTCCACTAGAGCAAGAAAACGACGGCCTCTATTAGCACT
CATCACTACCAGCGTGGCAATTGCATGTTATGCCGCGACACCAATCCCGT
GGGAAGCGCGTGAAAAAGGTAACGATTTTGCAGGCTCTACTTCGCCCTTG
AGCATCGTCGGTCCAGGCGGGGAAGATGGTGCGTATTCCTTCGACACCAA
GGTACGCACGCTTGAGATCCTGAAGCATCTGCGACAAGGAGACGTGCCTT
TGGAAGTGCTACACGAAATTTTGCCCGGAAACGGTAGCGTAGATTTTCAA
GTGAGCATTAAAGCCTGGGATGGCAGTAACTTTACCTGTGCACCCATTCC
TCAAGAGTCAGAGCACGACAAGGAAGTTGACAACATCGGATCAGCACATA
TATTCAAAGACAAGGCCCCCGAAGCGCTGAACAAGAACCTGGATAATACC
TGTGCCATTTTGAACAAGGATTACTGGAGCTACGAGTGGTGCCACCGTCG
GGAAGTGCGTCAGTTCCACCTGAACACTCCCGTCGACACAGAGGAACCGA
GCGCCGAGCCTGTCCGGGACCCTGATTGGAGCTTGGGAAAATATGCGAAG
ACGGAGGTCCTGACTCCGGAAGGGGGGGATCGGGGGGCGATGGCCGTGGT
CGATTACTTTGTGGGTGGACAGCTTTGCCACGAAACAGGACAAGGCCGCC
AAACCATTGTGGAGTTCTACTGTTGCGCCGACGGCTCCCTGCCTTCCGAG
GTCCAGGCGCGCATCGCTGACGTAACCCGTGTCCCGTACGCGGTGGCCCA
GCTCATGTCCGTGGAGGAGATCGCAACCTGCAAGTACGCCATCATAGTCT
GCTCGCCCCTCCTTTGTGACGCCCAGCAACTTGCTACTCGCGCGACGCTC
ACTGGACCGGCCGCCGCCTCCCAAGCCTTGCAGTTGCTGGAGCCCATGGC
TTCCCAGTGCTTGCGGCGCCATGACGGGTATTGGTCGTACGAATTTTGTT
ACAACGGCTCCATCCGCCAATTCCACACCGTGGCCGTGCGGGAAGCGACG
GGCAATGTGGTGAGTAAGGTGGAGAGTGAGTACATAATCGGAACAAGCCA
GCCGGTGCCAGAGGGATTCAAGGAGGAGGACCACATCATCCTTAACAAGG
AGGAGGAGGGCGGGGATCCCTCCCTCTTCCAGATGGATTACACGGGCGGG
ACCGTGTGTGACTTGACGGGGGAAGTGCGGGCGACGACTGTACAATTTAT
CTGTGGGGAAGGACCCGTCGATGTCTTTGTCTCCATCAAGGAAGACCGCT
CCTGTCACTATAAAGCAGTCATTTCTACACCCAAACTCTGCCGGCATCCG
TCTTTCCGCAAAGAGAAGCCACCCACGCACGTGGTACACTGCAAGCGAGG
ACAGTAA back to top
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