EWM29025.1, cds1647 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29025.1 vs. NCBI_GenBank
Match: gi|585111543|gb|EWM29025.1| (Mannose-6-phosphate receptor binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 976.467 bits (2523), Expect = 0.000e+0 Identity = 468/468 (100.00%), Postives = 468/468 (100.00%), Query Frame = 0
Query: 1 MLHFSTRARKRRPLLALITTSVAIACYAATPIPWEAREKGNDFAGSTSPLSIVGPGGEDGAYSFDTKVRTLEILKHLRQGDVPLEVLHEILPGNGSVDFQVSIKAWDGSNFTCAPIPQESEHDKEVDNIGSAHIFKDKAPEALNKNLDNTCAILNKDYWSYEWCHRREVRQFHLNTPVDTEEPSAEPVRDPDWSLGKYAKTEVLTPEGGDRGAMAVVDYFVGGQLCHETGQGRQTIVEFYCCADGSLPSEVQARIADVTRVPYAVAQLMSVEEIATCKYAIIVCSPLLCDAQQLATRATLTGPAAASQALQLLEPMASQCLRRHDGYWSYEFCYNGSIRQFHTVAVREATGNVVSKVESEYIIGTSQPVPEGFKEEDHIILNKEEEGGDPSLFQMDYTGGTVCDLTGEVRATTVQFICGEGPVDVFVSIKEDRSCHYKAVISTPKLCRHPSFRKEKPPTHVVHCKRGQ 468
MLHFSTRARKRRPLLALITTSVAIACYAATPIPWEAREKGNDFAGSTSPLSIVGPGGEDGAYSFDTKVRTLEILKHLRQGDVPLEVLHEILPGNGSVDFQVSIKAWDGSNFTCAPIPQESEHDKEVDNIGSAHIFKDKAPEALNKNLDNTCAILNKDYWSYEWCHRREVRQFHLNTPVDTEEPSAEPVRDPDWSLGKYAKTEVLTPEGGDRGAMAVVDYFVGGQLCHETGQGRQTIVEFYCCADGSLPSEVQARIADVTRVPYAVAQLMSVEEIATCKYAIIVCSPLLCDAQQLATRATLTGPAAASQALQLLEPMASQCLRRHDGYWSYEFCYNGSIRQFHTVAVREATGNVVSKVESEYIIGTSQPVPEGFKEEDHIILNKEEEGGDPSLFQMDYTGGTVCDLTGEVRATTVQFICGEGPVDVFVSIKEDRSCHYKAVISTPKLCRHPSFRKEKPPTHVVHCKRGQ
Sbjct: 1 MLHFSTRARKRRPLLALITTSVAIACYAATPIPWEAREKGNDFAGSTSPLSIVGPGGEDGAYSFDTKVRTLEILKHLRQGDVPLEVLHEILPGNGSVDFQVSIKAWDGSNFTCAPIPQESEHDKEVDNIGSAHIFKDKAPEALNKNLDNTCAILNKDYWSYEWCHRREVRQFHLNTPVDTEEPSAEPVRDPDWSLGKYAKTEVLTPEGGDRGAMAVVDYFVGGQLCHETGQGRQTIVEFYCCADGSLPSEVQARIADVTRVPYAVAQLMSVEEIATCKYAIIVCSPLLCDAQQLATRATLTGPAAASQALQLLEPMASQCLRRHDGYWSYEFCYNGSIRQFHTVAVREATGNVVSKVESEYIIGTSQPVPEGFKEEDHIILNKEEEGGDPSLFQMDYTGGTVCDLTGEVRATTVQFICGEGPVDVFVSIKEDRSCHYKAVISTPKLCRHPSFRKEKPPTHVVHCKRGQ 468
BLAST of EWM29025.1 vs. NCBI_GenBank
Match: gi|676385637|ref|XP_009036097.1| (hypothetical protein AURANDRAFT_63519 [Aureococcus anophagefferens] >gi|323453096|gb|EGB08968.1| hypothetical protein AURANDRAFT_63519 [Aureococcus anophagefferens]) HSP 1 Score: 186.422 bits (472), Expect = 4.594e-51 Identity = 124/342 (36.26%), Postives = 170/342 (49.71%), Query Frame = 0
Query: 141 EALNKNLDNTCAILNKDYWSYEWCHRREVRQFHLNTPVDTEEPSAEPVRDPDWSLGKYAKTEVLTPEGGDRGAM---------AVVDYF-VGGQLCHETGQGRQTIVEFYCCADGSLPSEVQARIADVTRVPYAVAQLMSVEEIATCKYAIIVCSPLLCDAQQLATRATLTGPAAASQALQLLEPMASQCLRRHDGYWSYEFCYNGSIRQFHTVAVREATGNVVSKVESEYIIGTSQPVPEGFKEEDHIILNKEEEGGDPSLFQMDYTGGTVCDL-----TGEV--RATTVQFICGEGPVDVFVSIKEDRSCHYKAVISTPKLCRHPSFRKEKPPTHVVHCK 465
EAL + LD +CA LN+ +W+YEWCHRR VRQFHL R P+WSLG Y +TE+ +GG ++ VD F VGGQ C ETG GR + V F CC DG P +A R A A + SV+E+A C YA VCSP LC A+L LL+ + CL+RH+G+WS+EFCY RQFH A +A +++ + +G D + +++Y GT CD+ +GE R TT + +CG+ + VS+ EDR+CHY ++TP LC+H +F P T V C+
Sbjct: 72 EALGQ-LDGSCAYLNQGWWTYEWCHRRHVRQFHLEA----------QARSPEWSLGDYTRTELEDDDGGAASSVDAAGSEALSRAVDVFDVGGQRCDETGTGRSSTVHFRCC-DGPKPG--KATKGKRKRAAGAEAFITSVDEVALCSYAFAVCSPSLCSPSSPNATASL-----------LLKALEGVCLQRHEGWWSFEFCYKKGARQFHARAEDDAA----------------------------LVVERGADGWDKARVEVEYERGTPCDIGEDDDSGEKRRRGTTARLVCGD--TNALVSVVEDRTCHYVFTVTTPALCKHAAF-ATAPNTRPVTCE 357
BLAST of EWM29025.1 vs. NCBI_GenBank
Match: gi|551632477|ref|XP_005819108.1| (hypothetical protein GUITHDRAFT_148825 [Guillardia theta CCMP2712] >gi|428163034|gb|EKX32128.1| hypothetical protein GUITHDRAFT_148825 [Guillardia theta CCMP2712]) HSP 1 Score: 144.821 bits (364), Expect = 4.717e-35 Identity = 112/375 (29.87%), Postives = 167/375 (44.53%), Query Frame = 0
Query: 101 VSIKAWDGSNFTCAPIP---------QESEHDKEVDNIGSAHIFKDKAPEALNKNLDNTCAILNKDYWSYEWCHRREVRQFHLNTPVDTEEPSAEPVRDPDWSLGKYAKTEVLTPEGGDRGAMAVVD-YFVGGQLCHETGQGRQTIVEFYCCADGSLPSEVQARIADVTRVPYAVAQLMSVEEIATCKYAIIVCSPLLCDAQQLATRATLTGPAAASQALQLLEPMASQCLRRHDGYWSYEFCYNGSIRQFHTVAVREATGNVVSKVESEYIIGT--SQPVPEGFKEEDHIILNKEEEGGDPSLFQMDYTGGTVCDLTGEVRATTVQFICGEGPVDVFVSIKEDRSCHYKAVISTPKLCRHPSFRKEKPPTHVVH 463
V +K +G F C +P Q E K+ +I + + + ++L L C + YW++E CH +++RQFH EE V ++SLG + + V D +VV YF GG C ET R +V Y C +G + S++E ATC Y I+ +PLLCD LA T G + L ++ C R +G+W+YEFCY ++QFH +E + N +E+++GT S +P + DP YT GT+CD+TGE R VQF C ++V SIKE +C Y V TP +C HP+F+ +K + +H
Sbjct: 71 VKMKDKNGKEFDCV-MPSKTTEEQDAQHVEEQKKQADINAKSEQELPSLDSLLAPLTGRCFLRPDGYWNFELCHGKKIRQFH-------EEARKTTV---EYSLGDFDRAVVPKVVSKDTMDSSVVKHYFEGGTRCDETNGPRHAVV-LYRCVEGK------------------ENHIESMKEDATCSYTIVFATPLLCDHPLLAG-GTHAGSHVKPRVSDYLVGLSGTCFYRVEGWWTYEFCYQKHLKQFH----QENSVNT-----AEFMLGTLFSMLLPGSYV--------------DPQT----YTKGTICDVTGEPRQVEVQFKCATDSLNVVSSIKEKSTCKYALVFYTPLICNHPAFQSKKGKSTDLH 387
BLAST of EWM29025.1 vs. NCBI_GenBank
Match: gi|298710240|emb|CBJ26315.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 135.576 bits (340), Expect = 2.768e-31 Identity = 101/360 (28.06%), Postives = 163/360 (45.28%), Query Frame = 0
Query: 147 LDNTCAILNKDYWSYEWCHRREVRQFHLN------------------------TPVDTEEPSAEPVRDPDWSLGKYAKTEVLTPEGGDRG------------------AMAVVDYFVGGQLCHETGQGRQTIVEFYCCADGSLPSEVQARIADVTRVPYAVAQLMSVEEIATCKYAIIVCSPLLCDA----------QQLATRATLTGPAAASQALQLLEPMASQCLRRHDGYWSYEFCYNGS-IRQFHTVAVREATGNVVSKVESEYIIGTSQPVPEGFK-----EEDHIILNKEEEGGDPSLFQMDYTGGTVCDLTGEVRATTVQFICGEGPVDVFVSIKEDRSCHYKAVISTPKLCR 448
L+ +CA L+ YWSY+WCHR++V QFH + TP + SA+ P + A + G D G AV DY+ GG +C ETG R CC + + ++ AD P A+ L+S++E++ C Y + VCS LLC A Q+ + + L LL+ + + + + +W+Y+ C + + Q+H +R+A G+++SK+ +G + + K E + +I ++EE G+ +++TGGT CDLTG +R+TTV C G V + EDR+CHY+ + +P LCR
Sbjct: 136 LEGSCATLSHGYWSYKWCHRKDVTQFHKSEDGATTTVVNLGTHTRTELKRVNVTPTKADGASADSSDSPHEAEVSRALNNNKSKGGNDGGRHESQNDDLFQGINDVSELAAVYDYYEGGDVCEETGARRFLKTTITCCTANDVSAGGES--AD----PLAI--LVSLQEVSICSYLVQVCSRLLCPAATDGLTLGLGQEAVVSSGVVVTGKVGGVLGLLQELEACFPPKKETWWAYKLCISTTGFSQYHEDLLRKADGSLMSKI----TVGLGRITGKWDKSTVTGEGEELIRPQQEEEGEGGTIILEFTGGTECDLTGVLRSTTVHLKC--GSVQEVREVTEDRTCHYRVLAISPLLCR 481
BLAST of EWM29025.1 vs. NCBI_GenBank
Match: gi|1173116836|ref|XP_011626393.2| (protein OS-9 homolog isoform X3 [Amborella trichopoda]) HSP 1 Score: 116.701 bits (291), Expect = 1.758e-25 Identity = 59/179 (32.96%), Postives = 88/179 (49.16%), Query Frame = 0
Query: 290 DAQQLATRATLTGPAAASQALQLLEPMASQCLRRHDGYWSYEFCYNGSIRQFHTVAVREATGNVVSKVESEYIIGTSQPVPEGFKEEDH----IILNKEEEGGDPSLFQMDYTGGTVCDLTGEVRATTVQFICGEGPVDVFVSIKEDRSCHYKAVISTPKLCRHPSFRKEKPPTHVVHC 464
++QQ ++ + +L++ + QC RH+G+W YEFCY+ +RQ H +K+ E+++GT P +H + + + YT GTVCDLT E R T V+F+C E P SIKE +C Y I P LCRHP FR+E+P H ++C
Sbjct: 133 NSQQNSSNVIMESGKLVKTPDELIDELKDQCFERHEGWWVYEFCYHKKLRQVHWED---------NKIVQEFVMGTYDPEVTAAFNSNHSGVSTLKDPRSKDAAQRYHAHLYTNGTVCDLTNEPRETEVRFMCSESPRVSITSIKEISTCKYAVTIQCPMLCRHPMFREERPAWHTINC 302
BLAST of EWM29025.1 vs. NCBI_GenBank
Match: gi|1173116832|ref|XP_011626391.2| (protein OS-9 homolog isoform X1 [Amborella trichopoda]) HSP 1 Score: 115.546 bits (288), Expect = 4.727e-25 Identity = 62/190 (32.63%), Postives = 90/190 (47.37%), Query Frame = 0
Query: 290 DAQQLATRATLTGPAAASQALQLLEPMASQCLRRHDGYWSYEFCYNGSIRQFHTVAVREATGNVVSKVESEYIIGTSQPVPEGFKEEDHIILN---------------KEEEGGDPSLFQMDYTGGTVCDLTGEVRATTVQFICGEGPVDVFVSIKEDRSCHYKAVISTPKLCRHPSFRKEKPPTHVVHC 464
++QQ ++ + +L++ + QC RH+G+W YEFCY+ +RQ H +K+ E+++GT P +H ++ K E D YT GTVCDLT E R T V+F+C E P SIKE +C Y I P LCRHP FR+E+P H ++C
Sbjct: 133 NSQQNSSNVIMESGKLVKTPDELIDELKDQCFERHEGWWVYEFCYHKKLRQVHWED---------NKIVQEFVMGTYDPEVTAAFNSNHSGVSTLKDPRSKDAAQRYWKAENLYDSRYHAHLYTNGTVCDLTNEPRETEVRFMCSESPRVSITSIKEISTCKYAVTIQCPMLCRHPMFREERPAWHTINC 313
BLAST of EWM29025.1 vs. NCBI_GenBank
Match: gi|1173116834|ref|XP_011626392.2| (protein OS-9 homolog isoform X2 [Amborella trichopoda]) HSP 1 Score: 115.546 bits (288), Expect = 5.441e-25 Identity = 62/190 (32.63%), Postives = 90/190 (47.37%), Query Frame = 0
Query: 290 DAQQLATRATLTGPAAASQALQLLEPMASQCLRRHDGYWSYEFCYNGSIRQFHTVAVREATGNVVSKVESEYIIGTSQPVPEGFKEEDHIILN---------------KEEEGGDPSLFQMDYTGGTVCDLTGEVRATTVQFICGEGPVDVFVSIKEDRSCHYKAVISTPKLCRHPSFRKEKPPTHVVHC 464
++QQ ++ + +L++ + QC RH+G+W YEFCY+ +RQ H +K+ E+++GT P +H ++ K E D YT GTVCDLT E R T V+F+C E P SIKE +C Y I P LCRHP FR+E+P H ++C
Sbjct: 132 NSQQNSSNVIMESGKLVKTPDELIDELKDQCFERHEGWWVYEFCYHKKLRQVHWED---------NKIVQEFVMGTYDPEVTAAFNSNHSGVSTLKDPRSKDAAQRYWKAENLYDSRYHAHLYTNGTVCDLTNEPRETEVRFMCSESPRVSITSIKEISTCKYAVTIQCPMLCRHPMFREERPAWHTINC 312
BLAST of EWM29025.1 vs. NCBI_GenBank
Match: gi|548856438|gb|ERN14291.1| (hypothetical protein AMTR_s00033p00178090 [Amborella trichopoda]) HSP 1 Score: 116.701 bits (291), Expect = 1.188e-24 Identity = 59/179 (32.96%), Postives = 88/179 (49.16%), Query Frame = 0
Query: 290 DAQQLATRATLTGPAAASQALQLLEPMASQCLRRHDGYWSYEFCYNGSIRQFHTVAVREATGNVVSKVESEYIIGTSQPVPEGFKEEDH----IILNKEEEGGDPSLFQMDYTGGTVCDLTGEVRATTVQFICGEGPVDVFVSIKEDRSCHYKAVISTPKLCRHPSFRKEKPPTHVVHC 464
++QQ ++ + +L++ + QC RH+G+W YEFCY+ +RQ H +K+ E+++GT P +H + + + YT GTVCDLT E R T V+F+C E P SIKE +C Y I P LCRHP FR+E+P H ++C
Sbjct: 133 NSQQNSSNVIMESGKLVKTPDELIDELKDQCFERHEGWWVYEFCYHKKLRQVHWED---------NKIVQEFVMGTYDPEVTAAFNSNHSGVSTLKDPRSKDAAQRYHAHLYTNGTVCDLTNEPRETEVRFMCSESPRVSITSIKEISTCKYAVTIQCPMLCRHPMFREERPAWHTINC 302
BLAST of EWM29025.1 vs. NCBI_GenBank
Match: gi|672130515|ref|XP_008788789.1| (PREDICTED: protein OS-9 homolog [Phoenix dactylifera]) HSP 1 Score: 111.694 bits (278), Expect = 4.464e-24 Identity = 56/158 (35.44%), Postives = 85/158 (53.80%), Query Frame = 0
Query: 311 QLLEPMASQCLRRHDGYWSYEFCYNGSIRQFHTVAVREATGNVVSKVESEYIIGTSQPVPEGFKEEDH--IILNKEEEGGDPS--LFQMDYTGGTVCDLTGEVRATTVQFICGEGPVDVFVSIKEDRSCHYKAVISTPKLCRHPSFRKEKPPTHVVHC 464
+L++ + +C RH+G+WSYEFCY +RQ H K+ E+++G P ++H + + K+ D S YT GT+CDLT + R T V+F+C E PV + SIKE +C Y + P LC+HP F++E+P H +HC
Sbjct: 118 ELIDVLKDKCFYRHEGWWSYEFCYEKHLRQLHLED---------DKIVQEFVLGLFDPEVTAAFNQNHSDVSMVKDPRSKDASQRYHAHQYTNGTICDLTNQPRETEVRFVCSE-PVVIISSIKEISTCKYVITLQCPMLCKHPMFQQERPTWHTIHC 265 HSP 2 Score: 62.3882 bits (150), Expect = 4.477e-7 Identity = 53/210 (25.24%), Postives = 88/210 (41.90%), Query Frame = 0
Query: 92 PGNGSVDFQVSIKAWDGSNFTC-APIPQESEHDKEVDNIGSAHIF-------KDKAPEALNKNLDNTCAILNKDYWSYEWCHRREVRQFHLNTPVDTEEPSAEPVRDPD----WSLGKYAKTEVLTPEGGDRGAMAVVDYFVGGQLCHETGQGRQTIVEFYCCADGSLPSEVQARIADVTRVPYAVAQLMSVEEIATCKYAIIVCSPLLC 289
P NG +S K +G ++ C P+ +E++ + V S++ K K P+ L L + C ++ +WSYE+C+ + +RQ HL +E + DP+ ++ + V P D + G +C T Q R+T V F C V + S++EI+TCKY I + P+LC
Sbjct: 62 PENGLESVMMSNK--EGQSYMCFLPLVEETKTVRSVTPQNSSNALLESDRRIKLKTPDELIDVLKDKCFYRHEGWWSYEFCYEKHLRQLHLEDDKIVQE-FVLGLFDPEVTAAFNQNHSDVSMVKDPRSKDASQRYHAHQYTNGTICDLTNQPRETEVRFVCSE--------------------PVVIISSIKEISTCKYVITLQCPMLC 248
BLAST of EWM29025.1 vs. NCBI_GenBank
Match: gi|743808202|ref|XP_010928275.1| (PREDICTED: protein OS-9 homolog [Elaeis guineensis]) HSP 1 Score: 111.694 bits (278), Expect = 4.832e-24 Identity = 57/158 (36.08%), Postives = 86/158 (54.43%), Query Frame = 0
Query: 311 QLLEPMASQCLRRHDGYWSYEFCYNGSIRQFHTVAVREATGNVVSKVESEYIIGTSQP-VPEGFKE-EDHIILNKEEEGGDPS--LFQMDYTGGTVCDLTGEVRATTVQFICGEGPVDVFVSIKEDRSCHYKAVISTPKLCRHPSFRKEKPPTHVVHC 464
+L++ + +C RH+G+WSYEFCY +RQ H K+ E+++G P V F + + + + K+ D S YT GT+CDLT + R T V+F+C E PV + SIKE +C Y + P LC+HP F++E+P H +HC
Sbjct: 118 ELIDVIKDKCFYRHEGWWSYEFCYQKHLRQLHLED---------DKIVQEFVLGVFDPEVTATFNQNQSDVSMVKDPRSKDASQRYHAHQYTNGTICDLTNQPRETEVRFVCSE-PVVIISSIKEISTCKYVVTLQCPMLCKHPMFQQERPTWHTIHC 265 HSP 2 Score: 63.1586 bits (152), Expect = 2.058e-7 Identity = 48/201 (23.88%), Postives = 87/201 (43.28%), Query Frame = 0
Query: 101 VSIKAWDGSNFTC-APIPQESEHDKEVDNIGSAHIF-------KDKAPEALNKNLDNTCAILNKDYWSYEWCHRREVRQFHLNTPVDTEEPSAEPVRDPD----WSLGKYAKTEVLTPEGGDRGAMAVVDYFVGGQLCHETGQGRQTIVEFYCCADGSLPSEVQARIADVTRVPYAVAQLMSVEEIATCKYAIIVCSPLLC 289
V + +G ++ C P+ +E++ + + S++I K K P+ L + + C ++ +WSYE+C+++ +RQ HL +E V DP+ ++ + + V P D + G +C T Q R+T V F C V + S++EI+TCKY + + P+LC
Sbjct: 69 VMMSNKEGQSYMCFLPLVEETKTVRSISPQNSSNILLESDRRIKLKTPDELIDVIKDKCFYRHEGWWSYEFCYQKHLRQLHLEDDKIVQE-FVLGVFDPEVTATFNQNQSDVSMVKDPRSKDASQRYHAHQYTNGTICDLTNQPRETEVRFVCSE--------------------PVVIISSIKEISTCKYVVTLQCPMLC 248 The following BLAST results are available for this feature:
BLAST of EWM29025.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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