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Properties
| Property Name | Value |
|---|
| Product | histone-lysine n- h3 lysine-36 and h4 lysine-20 specific |
| Orig transcript id | gnl|cribi|Naga_100071g12.7951.mrna |
| Orig protein id | gnl|cribi|Naga_100071g12.7951 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1143376..1144552 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1643 ID=rna1643|Name=rna1643|organism=Nannochloropsis gaditana|type=mRNA|length=1770bp
GAGAAGGAGACGCCGCAACCCCTCGGGCGCTTCTCACGCACTAATCCGCT
TACCTTTTAGTCACAGTCCTTTCTCAAACCGCGTGGTATTCCTGCGCGTT
GTATCAAAGGCTCTGTTTTGCCTTGGCTGCATTCGCATCACCATCCTCTC
GGCTTAGCGCCTGCACTCTTACCCGTTGCCCCGGAATCCTCGCGTGGTAC
CTGCAAGAAACTACTTGCCGTACAACACCACCACTTCAACTCACCCCCTG
CTGGTCGAGGATACCAGGCCGCTCGCACAAGTTCACACAAATATCCTCAC
GCTTTTTTTCATACGTCAGCCAACAGCCGCAGCGTGTTGCGTCCGTGTGA
AAGCTGCCGCCGCCCCGCTCCACCGTATCCTCTACGAATCGCCCCTTTCC
TTCCTCGCGTTGCCCGCGCGTCTTCCACTTTCTCCTCTCCACCTTTTTCA
TCAGGCACCACATCACCAGAGTCGTCGCCGCTGCGGCGTCGCCTTCAGTG
GTAGCGGCCGCGTTGCCAAAAGCTTCTCGCAGGTCCACGTTTGTCCTCCC
CGTGTCACAGGCGCTTGCCTCAGTGCGCACGGAAACGCCTTCGCGGGAAT
TGCGCAGCCCTTTTACAATGAGCTACCACGGAGGCAACAGAAAAAGGAAG
TTTGGTGTCAGCAGCAGGAGCAGGAGTAAAAGCGACGGAAGCGTACGACA
CAAAAATGCATTCCCTGCCGCGCTCTCACCACTTCCCAAGTACCGCTGGG
ACAACAGCGTGGATTTCGGGGAGCATGATGTAGACAGCGCGGAGCCCGTC
ACGGCAGCTGGGCGACAGACGAATAACAAGGGGTGGCGCGGGCAACAAGG
AGACGATCCTAACGGAAGTGCGGTGATTAATGCGCTAATTATCCTCAACA
CTGATTGTGTGGGTGGAAGCCTGTTTCGCAGGTTCTGGGCGCATTCTACC
CTGCGGGTATGTGCGGACGGTGGAGGAAACAGGCTTTATGATAGCCTTGG
CAAGATGGAGAGGGAAGATTTCGTACCCATGGCTATAAACGGTGATCTGG
ACTCTCTGCGTGAGGAGGTAGCGGACTGGTACCGGGCCCGAGGCTCCCAG
GTCGTGAAAAACGCGGACCAAGACAGCAACGACCTGGAGAAGTGCTTGGA
GTTTCTGAAGGGGCAAGAGGCGGCGAACAAGGGTCCTGGGTCGAGCGGGG
GAAAGGATGGGGTGGGATTGCGGCCGTGGGAGAGGAAGCAGGTGGCGACG
CGGCAAAGCAGTCGCCTGAACGTCTTTGTGCTCGGCGCCCTGGGCCAACG
ATTCGACCACACCATGGCAAATTGCCACATCCTGTACAGGTATTCGAAGG
TGTTTCGGCGCCTGGTTTTGCTGGGGGAGGAAAGCCTCGCCTTCCTCTTG
CCGGCGGGGAGGCATTGGATCGTCCCGGACGCGAGGACAGAGAATCCTGT
CTGTGGCTTGATTCCCATGGGGCAACCGTGCACGTCCATCCGTACTCGAG
GGCTCCGGTGGGAGTTGCGTGGGGAGGCCATGGCGATGGGCAGTTTGGTC
AGCACCTCGAACGAACGCGTGATGGTGGATGGGGGGGGAGAGGGGGAAGG
CGGGGAGGAGGGGAGGGAAGGAGAGAGAGGGGTGTGGATTGAAAATTCCG
ATCCGGTCATTTGGACCTCGGGCCTCAAAAAGGAATGGCAGAAAGGAAGT
TAAAGCGCCTGGTGGAGGATGAGTAGGACCATGTATATAAAGCAATGAAG
CAGAGTCGGAGGCCGGACTA back to topprotein sequence of rna1643 >rna1643-protein ID=rna1643-protein|Name=rna1643|organism=Nannochloropsis gaditana|type=polypeptide|length=150bp
MVIQQGKFPATEVFRTQGRGWALRTREEVEKGTLLIEYRGEVVTMEEAQT
RMRSMSAGQDYYFAALEGELVLDAGPMGSEARFANHSCAPNCVLQKWRAG
GEAHILLVAARRLGAGEEVTYNYQVDTLAGMFGKQACRCGAKNCIRVLWP back to topmRNA from alignment at CM002457.1:1143376..1144552+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1643 ID=rna1643|Name=rna1643|organism=Nannochloropsis gaditana|type=mRNA|length=1177bp|location=Sequence derived from alignment at CM002457.1:1143376..1144552+ (Nannochloropsis gaditana)
ATGGTCATCCAGCAGGGGAAGTTTCCCGCCACCGAGGTCTTCCGCACCCA
GGGTCGTGGGTGGGCGCTCCGGAcgcgggaagaggtggagaaagggacgc
TTTTGATCGAGTaccggggggaggtggtgaccatggaggaggcacaGACC
CGAATGCGGTCCATGTCGGCCGGCCAAGACTACTACTTCGCCGCGTTGGA
GGGGGAGCTGGTCCTGGACGCGGGGCCCATGGGCTCGGAAGCCCGCTTTG
CCAACCACAGCTGTGCGCCGAACTGCGTGCTGCAGaagtggagggcgggg
ggggaggcgcatATCCTTTTGGTTGCGGCCCGGCGGttgggggcagggga
ggaggtgacttACAACTACCAGGTGGACACATTGGCGGGCATGTTCGGGA
AGCAAGCCTGTCGATGCGGGGCGAAGAATTGCAGTGGGTTGATTGGCAAG
CGGccggagggcaaaggggaggactgggaggggtggaaggagcgCGCAGC
CGCGTGCCTGGCGATGCGGGCCCCAAGTctggaggcagtggaggcgctgg
tgcaggaaggggaggagggcgtggagctcGAGGTACTGCAGGACAAGCTG
CGGGCAGCGCAGGGATGGcagaggcgatggagggccttgcagggagggtg
gctggaaggagacgaaggtgCACGCgccggggcggaggagggccaggaag
aagaaaaagtggagggggagaagaggcaggtAGAACcggcgggcggggtg
gaCACGAGCGTCGCGGCGTGCACGGGCCTagtctcgaggaggaggccgaa
aCATGGGCCGGGCCCTGCGTCGTCGCGAGGCGTTGGTGTGCCTCCGAGGG
AAAGACCCACCTCGGGGCCGTTGATTGATTTGGAGGCACTGGCCGAGCTG
GTGGGCACCGTGCCAAAAGACATCCGCTTCAAGGAGGCGACCGAGGCCCG
TCAGCTCCTAAACCGCGCCAAGCAGGCGCGTGCCCGGCTCCGGACGGTGC
GCGAAACTGCCTTACAGGAAGCCGACGCCGGCCCGACTGCCACAGTCCCC
AAGAcgcaggcgggcggggcctgTCAAGCCACGCTGGAAACGTCTCGAGC
ACCGCCTGGGATCGAAcacgtggtggaggatggccgggctcctgcctccc
cctctagTCCGTGTCCTCTGGCCGTGA back to topCoding sequence (CDS) from alignment at CM002457.1:1143376..1144552+ >rna1643 ID=rna1643|Name=rna1643|organism=Nannochloropsis gaditana|type=CDS|length=906bp|location=Sequence derived from alignment at CM002457.1:1143376..1144552+ (Nannochloropsis gaditana)
ATGGTCATCCAGCAGGGGAAGTTTCCCGCCACCGAGGTCTTCCGCACCCA
GGGTCGTGGGTGGGCGCTCCGGAcgcgggaagaggtggagaaagggacgc
TTTTGATCGAGTaccggggggaggtggtgaccatggaggaggcacaGACC
CGAATGCGGTCCATGTCGGCCGGCCAAGACTACTACTTCGCCGCGTTGGA
GGGGGAGCTGGTCCTGGACGCGGGGCCCATGGGCTCGGAAGCCCGCTTTG
CCAACCACAGCTGTGCGCCGAACTGCGTGCTGCAGaagtggagggcgggg
ggggaggcgcatATCCTTTTGGTTGCGGCCCGGCGGttgggggcagggga
ggaggtgacttACAACTACCAGGTGGACACATTGGCGGGCATGTTCGGGA
AGCAAGCCTGTCGATGCGGGGCGAAGAATTGCATCCGTGTCCTCTGGCCG
TGAATGGTCATCCAGCAGGGGAAGTTTCCCGCCACCGAGGTCTTCCGCAC
CCAGGGTCGTGGGTGGGCGCTCCGGAcgcgggaagaggtggagaaaggga
cgcTTTTGATCGAGTaccggggggaggtggtgaccatggaggaggcacaG
ACCCGAATGCGGTCCATGTCGGCCGGCCAAGACTACTACTTCGCCGCGTT
GGAGGGGGAGCTGGTCCTGGACGCGGGGCCCATGGGCTCGGAAGCCCGCT
TTGCCAACCACAGCTGTGCGCCGAACTGCGTGCTGCAGaagtggagggcg
gggggggaggcgcatATCCTTTTGGTTGCGGCCCGGCGGttgggggcagg
ggaggaggtgacttACAACTACCAGGTGGACACATTGGCGGGCATGTTCG
GGAAGCAAGCCTGTCGATGCGGGGCGAAGAATTGCATCCGTGTCCTCTGG
CCGTGA back to top
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