EWM29033.1, cds1639 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29033.1 vs. NCBI_GenBank
Match: gi|585111551|gb|EWM29033.1| (histone-lysine n- h3 lysine-36 and h4 lysine-20 specific [Nannochloropsis gaditana]) HSP 1 Score: 310.842 bits (795), Expect = 2.652e-107 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
Query: 1 MVIQQGKFPATEVFRTQGRGWALRTREEVEKGTLLIEYRGEVVTMEEAQTRMRSMSAGQDYYFAALEGELVLDAGPMGSEARFANHSCAPNCVLQKWRAGGEAHILLVAARRLGAGEEVTYNYQVDTLAGMFGKQACRCGAKNCIRVLWP 150
MVIQQGKFPATEVFRTQGRGWALRTREEVEKGTLLIEYRGEVVTMEEAQTRMRSMSAGQDYYFAALEGELVLDAGPMGSEARFANHSCAPNCVLQKWRAGGEAHILLVAARRLGAGEEVTYNYQVDTLAGMFGKQACRCGAKNCIRVLWP
Sbjct: 1 MVIQQGKFPATEVFRTQGRGWALRTREEVEKGTLLIEYRGEVVTMEEAQTRMRSMSAGQDYYFAALEGELVLDAGPMGSEARFANHSCAPNCVLQKWRAGGEAHILLVAARRLGAGEEVTYNYQVDTLAGMFGKQACRCGAKNCIRVLWP 150
BLAST of EWM29033.1 vs. NCBI_GenBank
Match: gi|299116669|emb|CBN74814.1| (Whsc1 protein [Ectocarpus siliculosus]) HSP 1 Score: 174.481 bits (441), Expect = 1.109e-47 Identity = 88/153 (57.52%), Postives = 106/153 (69.28%), Query Frame = 0
Query: 2 VIQQGKFPATEVFRT-QGRGWALRTREE--VEKGTLLIEYRGEVVTMEEAQTRMRSM-------SAGQDYYFAALEGELVLDAGPMGSEARFANHSCAPNCVLQKWRAGGEAHILLVAARRLGAGEEVTYNYQVDTLAGMFGKQACRCGAKNC 144
IQ FPATEVFRT +GRGW LR EE E GTLL EY GEV+ M+E + R+R + S+G D+YFA+L+G LVLD GPMG EARFANHSC+PNC++QKW GE ++LVAAR + GEE+TYNYQ DTL G +Q C CG C
Sbjct: 326 AIQTKTFPATEVFRTFEGRGWGLRLAEERGAEAGTLLHEYLGEVIMMDECRRRLRKVGRKGVEGSSG-DFYFASLDGNLVLDGGPMGGEARFANHSCSPNCLMQKWSVLGETRVVLVAARDISVGEELTYNYQADTLGGFVERQKCLCGEPQC 477
BLAST of EWM29033.1 vs. NCBI_GenBank
Match: gi|676385149|ref|XP_009035853.1| (hypothetical protein AURANDRAFT_13518, partial [Aureococcus anophagefferens] >gi|323453948|gb|EGB09819.1| hypothetical protein AURANDRAFT_13518, partial [Aureococcus anophagefferens]) HSP 1 Score: 133.265 bits (334), Expect = 2.971e-36 Identity = 71/147 (48.30%), Postives = 90/147 (61.22%), Query Frame = 0
Query: 1 MVIQQGKFPATEVFRT--QGRGWALRTREEVEKGTLLIEYRGEVVTMEEAQTRMRSMSAGQDYYFAALEGELVLDAGPMGSEARFANHSCAPNCVLQKWRAGGEAHILLVAARRLGAGEEVTYNYQV-DTLAGMFGKQACRCGAKNC 144
VIQ+ FP E+F T RG+ LR R +V+ GT+L EYRGEV+ E Q R + A +Y AAL L +DAG G+ ARFANHSCAPNC L+KWR G E ++LVA + A E+TY+Y +A + Q CRCGA NC
Sbjct: 64 TVIQRRAFPPMEIFDTGDDNRGFGLRCRVDVKAGTMLGEYRGEVIDAAELQRRKETRDAADPFYIAALGDGLAIDAGRKGAYARFANHSCAPNCALEKWRVGEEPRLVLVARGAIPANTELTYDYNAGGGVADVTVAQQCRCGAPNC 210
BLAST of EWM29033.1 vs. NCBI_GenBank
Match: gi|1176075294|ref|XP_020607640.1| (histone-lysine N-methyltransferase NSD2-like isoform X3 [Orbicella faveolata]) HSP 1 Score: 140.198 bits (352), Expect = 1.319e-35 Identity = 63/141 (44.68%), Postives = 90/141 (63.83%), Query Frame = 0
Query: 4 QQGKFPATEVFRTQGRGWALRTREEVEKGTLLIEYRGEVVTMEEAQTRMRSMSAGQDYYFAALEGELVLDAGPMGSEARFANHSCAPNCVLQKWRAGGEAHILLVAARRLGAGEEVTYNYQVDTLAGMFGKQACRCGAKNC 144
Q+ ++ E FRT RGW LR +E+V+KG +IEY GE++ Q R+R +YY ++ + ++DAGPMG+ +RF NHSC PNC QKW G+ + L A+R + AGEE+T++YQ+D L K+ C CGAKNC
Sbjct: 878 QKRQYVDCEPFRTLHRGWGLRCKEDVKKGQFVIEYVGELIDEATCQERVRKGEDITNYYMLTIDKDCIIDAGPMGNLSRFMNHSCDPNCETQKWTVNGDVRVGLFASREIKAGEELTFDYQLDCLGNE--KKKCHCGAKNC 1016
BLAST of EWM29033.1 vs. NCBI_GenBank
Match: gi|1176075290|ref|XP_020607638.1| (histone-lysine N-methyltransferase NSD2-like isoform X1 [Orbicella faveolata] >gi|1176075292|ref|XP_020607639.1| histone-lysine N-methyltransferase NSD2-like isoform X2 [Orbicella faveolata]) HSP 1 Score: 139.813 bits (351), Expect = 1.686e-35 Identity = 63/141 (44.68%), Postives = 90/141 (63.83%), Query Frame = 0
Query: 4 QQGKFPATEVFRTQGRGWALRTREEVEKGTLLIEYRGEVVTMEEAQTRMRSMSAGQDYYFAALEGELVLDAGPMGSEARFANHSCAPNCVLQKWRAGGEAHILLVAARRLGAGEEVTYNYQVDTLAGMFGKQACRCGAKNC 144
Q+ ++ E FRT RGW LR +E+V+KG +IEY GE++ Q R+R +YY ++ + ++DAGPMG+ +RF NHSC PNC QKW G+ + L A+R + AGEE+T++YQ+D L K+ C CGAKNC
Sbjct: 878 QKRQYVDCEPFRTLHRGWGLRCKEDVKKGQFVIEYVGELIDEATCQERVRKGEDITNYYMLTIDKDCIIDAGPMGNLSRFMNHSCDPNCETQKWTVNGDVRVGLFASREIKAGEELTFDYQLDCLGNE--KKKCHCGAKNC 1016
BLAST of EWM29033.1 vs. NCBI_GenBank
Match: gi|1005434647|ref|XP_015754821.1| (PREDICTED: histone-lysine N-methyltransferase NSD2-like isoform X2 [Acropora digitifera]) HSP 1 Score: 139.813 bits (351), Expect = 1.774e-35 Identity = 63/141 (44.68%), Postives = 90/141 (63.83%), Query Frame = 0
Query: 4 QQGKFPATEVFRTQGRGWALRTREEVEKGTLLIEYRGEVVTMEEAQTRMRSMSAGQDYYFAALEGELVLDAGPMGSEARFANHSCAPNCVLQKWRAGGEAHILLVAARRLGAGEEVTYNYQVDTLAGMFGKQACRCGAKNC 144
Q+ ++ E FRT RGW LR +E+V+KG +IEY GE++ Q R++ +YY ++ + ++DAGPMG+ +RF NHSC PNC QKW GE + L A+R + AGEE+T++YQ+D L K+ C CGAKNC
Sbjct: 965 QKRQYVDCEPFRTLHRGWGLRCKEDVKKGQFVIEYVGELIDDATCQERVQKGEDITNYYMLTIDKDCIIDAGPMGNLSRFMNHSCDPNCETQKWTVNGEVRVGLFASREIMAGEELTFDYQLDCLGNE--KKKCHCGAKNC 1103
BLAST of EWM29033.1 vs. NCBI_GenBank
Match: gi|1005434645|ref|XP_015754820.1| (PREDICTED: histone-lysine N-methyltransferase NSD2-like isoform X1 [Acropora digitifera]) HSP 1 Score: 139.043 bits (349), Expect = 2.719e-35 Identity = 63/141 (44.68%), Postives = 90/141 (63.83%), Query Frame = 0
Query: 4 QQGKFPATEVFRTQGRGWALRTREEVEKGTLLIEYRGEVVTMEEAQTRMRSMSAGQDYYFAALEGELVLDAGPMGSEARFANHSCAPNCVLQKWRAGGEAHILLVAARRLGAGEEVTYNYQVDTLAGMFGKQACRCGAKNC 144
Q+ ++ E FRT RGW LR +E+V+KG +IEY GE++ Q R++ +YY ++ + ++DAGPMG+ +RF NHSC PNC QKW GE + L A+R + AGEE+T++YQ+D L K+ C CGAKNC
Sbjct: 920 QKRQYVDCEPFRTLHRGWGLRCKEDVKKGQFVIEYVGELIDDATCQERVQKGEDITNYYMLTIDKDCIIDAGPMGNLSRFMNHSCDPNCETQKWTVNGEVRVGLFASREIMAGEELTFDYQLDCLGNE--KKKCHCGAKNC 1058
BLAST of EWM29033.1 vs. NCBI_GenBank
Match: gi|315364634|pdb|3OOI|A (Chain A, Crystal Structure Of Human Histone-Lysine N-Methyltransferase Nsd1 Set Domain In Complex With S-Adenosyl-L-Methionine) HSP 1 Score: 129.028 bits (323), Expect = 2.233e-34 Identity = 58/140 (41.43%), Postives = 85/140 (60.71%), Query Frame = 0
Query: 7 KFPATEVFRTQGRGWALRTREEVEKGTLLIEYRGEVVTMEEAQTRMRSMSAGQ--DYYFAALEGELVLDAGPMGSEARFANHSCAPNCVLQKWRAGGEAHILLVAARRLGAGEEVTYNYQVDTLAGMFGKQACRCGAKNC 144
++P E+FRT RGW LRT+ +++KG + EY GE++ EE + R+R ++Y L+ + ++DAGP G+ ARF NH C PNC QKW G+ + L A + AG E+T+NY ++ L GK C+CGA NC
Sbjct: 90 QYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGN--GKTVCKCGAPNC 227
BLAST of EWM29033.1 vs. NCBI_GenBank
Match: gi|736250468|ref|XP_010787857.1| (PREDICTED: histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific-like, partial [Notothenia coriiceps]) HSP 1 Score: 127.102 bits (318), Expect = 2.996e-34 Identity = 58/140 (41.43%), Postives = 84/140 (60.00%), Query Frame = 0
Query: 7 KFPATEVFRTQGRGWALRTREEVEKGTLLIEYRGEVVTMEEAQTRMRSMSAGQ--DYYFAALEGELVLDAGPMGSEARFANHSCAPNCVLQKWRAGGEAHILLVAARRLGAGEEVTYNYQVDTLAGMFGKQACRCGAKNC 144
++ E+FRT RGW LR +++KG + EY GEV+ EE ++R+R ++Y L+ + ++DAGP G+EARF NH C PNC QKW G+ + L A + AG E+T+NY ++ L GK C+CGA NC
Sbjct: 34 QYSQVEIFRTLSRGWGLRCVHDIKKGHFVSEYVGEVIDEEECRSRIRQAQETDICNFYMLTLDKDRIIDAGPKGNEARFMNHCCQPNCETQKWTVSGDTRVGLFALIDVAAGTELTFNYNLECLGN--GKTVCKCGAPNC 171
BLAST of EWM29033.1 vs. NCBI_GenBank
Match: gi|1188108524|ref|XP_020776298.1| (histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific [Boleophthalmus pectinirostris]) HSP 1 Score: 134.806 bits (338), Expect = 8.776e-34 Identity = 59/140 (42.14%), Postives = 86/140 (61.43%), Query Frame = 0
Query: 7 KFPATEVFRTQGRGWALRTREEVEKGTLLIEYRGEVVTMEEAQTRMRSMSAGQ--DYYFAALEGELVLDAGPMGSEARFANHSCAPNCVLQKWRAGGEAHILLVAARRLGAGEEVTYNYQVDTLAGMFGKQACRCGAKNC 144
++ + E+FRT RGW LR +++KG + EY GEV+ EE ++R+R ++Y L+ + ++DAGP G+EARF NHSC PNC QKW G+ + L A + AG E+T+NY ++ L GK C+CGA NC
Sbjct: 1910 EYSSVEIFRTLSRGWGLRCSHDIKKGQFVSEYVGEVIDEEECRSRIRDAQENDIGNFYMLTLDKDRIIDAGPKGNEARFMNHSCRPNCETQKWTVSGDTRVGLFALEDIPAGTELTFNYNLECLGN--GKTVCKCGAPNC 2047 The following BLAST results are available for this feature:
BLAST of EWM29033.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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