Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100024g6.4333.mrna |
Orig protein id | gnl|cribi|Naga_100024g6.4333 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002457.1 | supercontig | CM002457.1:1096939..1098856 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1627 ID=rna1627|Name=rna1627|organism=Nannochloropsis gaditana|type=mRNA|length=3141bp AAGGGCAACTTACGTCTGGTTCAGGAGTCGTGGCGAGTCACTCTTAGACA ACGGTCAAAAGTACCGGCTCATGTGCTCGAAGAAGTTTTGGGTGAAGTAT CGTATGGACAGCCGCAATTTTTTTCTCTTGACCTCCCTCTGTCCACACCT TGTCCCCGTGCCCCTCGCTCCCGCCCTCGTCATACTGAAAAACCTGTCTG GGGTATGCGACGACCGACAAGCGGACTCTCGCCGTCTTATTGAAAGGGGT TGGACACGTCCCAGCATCTGGTGCATCTTCTGTAATTGGAGCTCTCGACC TGAAATTATAACGACTCACGCATCTTATGCATTTTATGACAGCAGGGAGG AGTGACCTGCCAGGATTTTATTTCCCTCAACAAGTGTAATAAGCAGGAAG CCACGCACGCACGGAACTCCTCCGTGTAGATGAGCAAATCAATCGGCAAG GGATGCGCCCGTAGACGCCTTTTCTATCTCTTTACTCTAGGCGCGTTGTG TCGGCGTGGCGATGGCAGCCTCGAGACAACCCATTCCTTCCACGCCTCCT CGTCCAAGCCATCGTCTCCGTCAGCTTGGAAGGAGCACGAAGCGGAGCAG CACCCGCTTCGACGGCAACAGAAGGAACCACAAATAAGACCAGCGTCAGC GGTTGGGAAATGCAATTCGCCCTCATCCATGAAATCGACAACGTCGTCCC TACCCTCCCGCGGTGGTGCGGGAGGGGCAGCGAGCCCGACCGGCGCGCCG GTGCACGTCCAAGACACGGAGATGAAAAAGCTTTTGAAGCGCGGTCAGTT GCAAGCTACTGGTTTCGACAAAGAAAAGGATCATGAGGCGTCCATGGATG GAAGCGGAGACAGCCCTTCCCGCTTCGCCCTCGTGCGACGGGGTCTCTAT CTCCTCTACCTCTTCAGTGCCGCCATCCTGACTGCCCTCCTCGCCCTCGT TTCCGAACGCTTCCGCAGCCCATATTGGTACAGAATGATTACTTGTGCCA TATCCCAGGCAGGGGCTGCTTTTATCAAGTGGGGCCAGTGGGCCTCGGCC CGGCCTGACATCTTTCCCGAGGAATTTTGCAGCACACTCGCCATGCTGCA CTCTTTCGCCCCGACCCATTCCTTTGCCTTCACGAAGCAAGCGATCGAGG AAGCCTTCGCGCGCCCTTTGGAGGAGGTCTTCGAAGCTTTCGACCCGGAT CCCATAGCCTCGGGAAGCATCGCCCAAGTGCACGCGGCGGTGATGAAAGG ACGCCGGGTGGCTGTGAAAGTGCGCCATCCGGGGGTAGCGGCACAGATCG ACATCGACTTCCGGGTTATGAAGAAGGTGGCAAGCCTTGCAGATATGATT CCTGCCTTGAAATTCTTGAATCTGGGGCACAGCATGGAGCAATTTTCCCA CACGCTGGCCAGTCAGACCAAGCTCGACGTGGAGGGGCGGCATCTCCTGC TTCTGAACCACAATTTCCGGAAGTGGCGCTCTTCCTTACGTTTTCCGGAG CCTTTGGTGCTGTCGGAAGGGGTCTTGGTGGAAAGCTGGGAGGAAGGGGT GATCATCTCGGACTTCATTGCCCGCTACAGCCGGTGGCGGGAGCTGGAGG CCCAAGGCTGTCAAATGTGCGGACAGGTCTTCGGCGCCTACACGCACCTC CGTCTCTTTATCCAGGACACCTTGCTCTTGCCCATCAAGCCCCTGGTGGA TGCCTGGAAAATGGACGCGGCGAGGAAGCGAATGGAGGCGGAGAAAGCGG CGGACGTCCAGGCAGAGGCTGCCGCTGAAGAGGCCGTGGCCGGGAGGCCA GTGGAGGGACAAGGCGATGCCGCAGCGTCCTTGGCGGAATTGAAGAATGC CAAGAACCGACGCCGCGCCCCCTTGAGCGTGGAGCTCGCCCACTTCATCG TGAGCACGGGGGAAGACCTGTACTTGAAAATGCTTCTGGTCGACAACCTC ATGCATGCCGATCTGCATCCGGGGAACATCCTCATACACGTGAACCGGAA CGGCCGCCCTGTCCTGACCTTGGTGGACGCGGGGATGGTGGCGAAATTGT CCGACGTGGAGCGGGCGAATTTTATCGGGCTCCTAGAGTCCATGGGAAGG GGGGACGGGGCTCGGGCGGCCCGGCATGTGCTGGGTTTCTCTTTGACACA AACCTGCGTGGGGGAAGACGCCACGGCTTTCGAGCAGGAGATGTGGGAGG TGTTTGCCCTCCATTGCCGCGGCTACAACACGGACGTGAGCATCGGCGTC GTCCTCCGGGAAGTCCTGGCCCTTGTTCGTAAATTCCACGTACGGGTGGA TGTGAACTACGCGACACTCCTGATCAACCTGCTGTGCTTGGAGGGGATGG CGGCGGCTCTCCTCCCGTCCTACAATATCCTGGACCGGGCAAAACCCTTG TTGGTCCCTCACTCCAACAAGCTGCTCCGGCCTTTCTTCCGCCGGATCTA CCCCCTCCTTCTAGGCTTCAAACGACGCGGGGAAAGCGCTCTCTTTAACC TGCTGAAGAAGACCGGTAACGTGCAACAACCGCACGCTCCATTGGCCATT GGCAGTGGCAGCGACGACAGCAGCACGAAAGATTCTTCCTCTTTCCTTCC GGCGGATCGCCACGCTCCCCGCATTAAGAGCCCTGTAGGTTAAAGGAAGT TAAACTCGACGTGGGTCTGTCCCTGATATAAAACCTGGAGCGGATGATTG CATGACCCCTTCTTCTAAAAAACTTTCTAAAATCGTATCAGAAATGAAAT CTTCGTTTTTAATCGAGGGGTTTTGGAGGTTTATGAAGATATCGCGCTGT ACAGAGGGCCACTTTGCGTCAGAAATAAAGGGTGGGGGTGACTAGGAGAA AGCGAGCGTGCGTCTTCCACTACTTAAAGAGGGATGACAGAAAAAGGACT TTTTTTTTGGCCTTGTGTGTAGGTAAAGATGACAGGGACATGCACATGGG ATGTGAGTCGCCCCCAGTCCTCTACATTCTCTATATACAGCGATACAATA AAATGATGAAATGTTAAAATCTGTCTCGCTACCGGGGCTTATTAGGAAAT AGATCAGGAAAGCATTTTGCGAGAGCCTACAGGTGAGTAAGATACGATAA GAGCTGACGAACAAACAGAAACCAGTTGGAGTTGCCAAGTT back to topprotein sequence of rna1627 >rna1627-protein ID=rna1627-protein|Name=rna1627|organism=Nannochloropsis gaditana|type=polypeptide|length=316bp MYVSSISAMALSMPGNAPSLLLREALLLTACVAGDTLFPSLLAYLYGSPS GTDSPSPPLILRLLLDNFTHATLASMVWWTVLAPPAPWPPAFSRPRPLPL PLYHEHRHLLPRPGHPAHKPCLEILLAFILGSALDLDHFIAARSFWGLQG VLHLSHRPPGHCLTSLLTLTACVWTLAHYIQGPQQGGTEPSVHARGTCGC CNQGFLLQNGQRLSLLFMSAALSHQLRDALRHGLWFCHLGFSTAPLSFHV YILLTMTLPLVIRRLLAKRGGEAERGEGPRVEERLENGEDREEREEERLA MRHAEFQLTRQRQFVV back to topmRNA from alignment at CM002457.1:1096939..1098856- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1627 ID=rna1627|Name=rna1627|organism=Nannochloropsis gaditana|type=mRNA|length=1918bp|location=Sequence derived from alignment at CM002457.1:1096939..1098856- (Nannochloropsis gaditana) GCAGGTGGGGTGCGCATGTTCCAAGAGCAAGCACCGAGAGATACCAAGGA
AGGGGCAGCAGATGCGAGGGCAAATAAATAGGGCGAAAGCTCGTCGAGCA
CCCGGGGGAAAATTGAGGAATGTGAAGAACGTGGCGTCGGCTATCATGTT
GCAGGGTGTGGTCATCTTCGCGTTTCTGTTTTTGGCTGACTTTATTTATA
TTGGACATGTAGACGGACTTCACTTTATTGCTTCTTCGCTGCTTCCAGCC
CTCGATCTTCCGTCTCGATTTCGACATCGGTCTTTTGACTTAATCCTTCT
TTTTCCCTCCGTCCAACTTTCTGATTTCTGAGTAATATTTTCACGACTCA
CGCAAGAGACTTTAACTTTAATCTCGTTGACCATGCAACCACGCAGCCAG
CAGCCCAGATGAAAGGCTGCCACATGACTAACGACCTCAAGGCGTCGCCT
CTTATGGTGCTTTTTACGATGGGATTTTCGACTTGCGCCCAAGTGTTGAT
TGCGCCTTCCGTCCACCTTTGACCTTTGGGAGGGGAAGGCAATGAAAGTG
TCCTGTTCGCAATGCTGTAGCGTGCACGGAGCGTAGAGGTGGAAGCTTGA
TCAGATGGGGTGGTAGATTGCGGGTCTGCTGCTACCTCTCGACCTTTCAA
TTTATTCATTAAAGCACCAATGTACGTCTCATCGATATCAGCAATGGCTC
TGAGCATGCCTGGAAATGCGCCCTCCTTACTACTTCGTGAAGCTCTGCTT
CTCACAGCTTGCGTAGCAGGTGACACGCTCTTCCCCAGCCTCCTCGCCTA
TCTCTACGGTTCTCCGTCAGGAACCGATTCGCCATCTCCTCCTCTCATTC
TTCGACTCTTACTGGACAATTTCACCCATGCCACGCTAGCCTCCATGGTC
TGGTGGACTGTGCTCGCGCCGCCTGCCCCATGGCCGCCCGCCTTCTCTCG
ACCCCGCCCCCTCCCCCTCCCGCTTTACCACGAGCATCGCCACCTCTTGC
CTCGTCCCGGCCACCCCGCTCACAAACCATGCTTGGAAATACTGCTGGCC
TTCATTCTCGGAAGTGCGCTCGACCTCGACCATTTTATTGCTGCGCGCTC
CTTCTGGGGCCTACAGGGGGTGCTGCACCTCTCCCACCGCCCCCCCGGGC
ACTGCCTGACTTCCCTCCTGACTCTCACCGCATGTGTATGGACGCTGGCC
CATTACATCCAAGGACCTCAGCAAGGAGGAACAGAACCTTCCGTCCATGC
ACGTGGCACCTGCGGATGCTGCAATCAAGGGTTCTTACTGCAAAATGGAC
AACGGCTTTCCCTGCTATTCATGAGCGCCGCCCTCTCCCACCAACTCCGG
GACGCTCTCAGGCATGGCCTCTGGTTTTGCCATTTGGGATTCTCCACGGC
TCCGCTTTCCTTTCATGTGTACATTCTTCTGACGATGACTTTACCCCTGG
TGATACGCAGGCTTTTGGCAAAAAGGGGGGGAGAGGCGGAGAGAGGGGAG
GGCCCGCGTGTGGAAGAGCGCCTCGAAAACGGCGAGGACAGGGAAGAGAG
GGAAGAAGAGAGGCTAGCCATGAGGCACGCAGAGTTTCAACTAACGCGGC
AGCGGCAATTTGTTGTGTAACTGAAACGCGGGACGTGTCCGTGATGAAAG
TGCAGAAGCAAGGGGAACTTGGCAACTCCAACTGGTTTCTGTTTGTTCGT
CAGCTCTTATCGTATCTTACTCACCTGTAGGCTCTCGCAAAATGCTTTCC
TGATCTATTTCCTAATAAGCCCCGGTAGCGAGACAGATTTTAACATTTCA
TCATTTTATTGTATCGCTGTATATAGAGAATGTAGAGGACTGGGGGCGAC
TCACATCCCATGTGCATGTCCCTGTCATCTTTACCTACACACAAGGCCAA
AAAAAAAGTCCTTTTTCT back to topCoding sequence (CDS) from alignment at CM002457.1:1096939..1098856- >rna1627 ID=rna1627|Name=rna1627|organism=Nannochloropsis gaditana|type=CDS|length=951bp|location=Sequence derived from alignment at CM002457.1:1096939..1098856- (Nannochloropsis gaditana) ATGTACGTCTCATCGATATCAGCAATGGCTCTGAGCATGCCTGGAAATGC GCCCTCCTTACTACTTCGTGAAGCTCTGCTTCTCACAGCTTGCGTAGCAG GTGACACGCTCTTCCCCAGCCTCCTCGCCTATCTCTACGGTTCTCCGTCA GGAACCGATTCGCCATCTCCTCCTCTCATTCTTCGACTCTTACTGGACAA TTTCACCCATGCCACGCTAGCCTCCATGGTCTGGTGGACTGTGCTCGCGC CGCCTGCCCCATGGCCGCCCGCCTTCTCTCGACCCCGCCCCCTCCCCCTC CCGCTTTACCACGAGCATCGCCACCTCTTGCCTCGTCCCGGCCACCCCGC TCACAAACCATGCTTGGAAATACTGCTGGCCTTCATTCTCGGAAGTGCGC TCGACCTCGACCATTTTATTGCTGCGCGCTCCTTCTGGGGCCTACAGGGG GTGCTGCACCTCTCCCACCGCCCCCCCGGGCACTGCCTGACTTCCCTCCT GACTCTCACCGCATGTGTATGGACGCTGGCCCATTACATCCAAGGACCTC AGCAAGGAGGAACAGAACCTTCCGTCCATGCACGTGGCACCTGCGGATGC TGCAATCAAGGGTTCTTACTGCAAAATGGACAACGGCTTTCCCTGCTATT CATGAGCGCCGCCCTCTCCCACCAACTCCGGGACGCTCTCAGGCATGGCC TCTGGTTTTGCCATTTGGGATTCTCCACGGCTCCGCTTTCCTTTCATGTG TACATTCTTCTGACGATGACTTTACCCCTGGTGATACGCAGGCTTTTGGC AAAAAGGGGGGGAGAGGCGGAGAGAGGGGAGGGCCCGCGTGTGGAAGAGC GCCTCGAAAACGGCGAGGACAGGGAAGAGAGGGAAGAAGAGAGGCTAGCC ATGAGGCACGCAGAGTTTCAACTAACGCGGCAGCGGCAATTTGTTGTGTA A back to top
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