EWM29075.1, cds1623 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29075.1 vs. NCBI_GenBank
Match: gi|585111594|gb|EWM29075.1| (hypothetical protein Naga_100024g6 [Nannochloropsis gaditana]) HSP 1 Score: 633.639 bits (1633), Expect = 0.000e+0 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0
Query: 1 MYVSSISAMALSMPGNAPSLLLREALLLTACVAGDTLFPSLLAYLYGSPSGTDSPSPPLILRLLLDNFTHATLASMVWWTVLAPPAPWPPAFSRPRPLPLPLYHEHRHLLPRPGHPAHKPCLEILLAFILGSALDLDHFIAARSFWGLQGVLHLSHRPPGHCLTSLLTLTACVWTLAHYIQGPQQGGTEPSVHARGTCGCCNQGFLLQNGQRLSLLFMSAALSHQLRDALRHGLWFCHLGFSTAPLSFHVYILLTMTLPLVIRRLLAKRGGEAERGEGPRVEERLENGEDREEREEERLAMRHAEFQLTRQRQFVV 316
MYVSSISAMALSMPGNAPSLLLREALLLTACVAGDTLFPSLLAYLYGSPSGTDSPSPPLILRLLLDNFTHATLASMVWWTVLAPPAPWPPAFSRPRPLPLPLYHEHRHLLPRPGHPAHKPCLEILLAFILGSALDLDHFIAARSFWGLQGVLHLSHRPPGHCLTSLLTLTACVWTLAHYIQGPQQGGTEPSVHARGTCGCCNQGFLLQNGQRLSLLFMSAALSHQLRDALRHGLWFCHLGFSTAPLSFHVYILLTMTLPLVIRRLLAKRGGEAERGEGPRVEERLENGEDREEREEERLAMRHAEFQLTRQRQFVV
Sbjct: 1 MYVSSISAMALSMPGNAPSLLLREALLLTACVAGDTLFPSLLAYLYGSPSGTDSPSPPLILRLLLDNFTHATLASMVWWTVLAPPAPWPPAFSRPRPLPLPLYHEHRHLLPRPGHPAHKPCLEILLAFILGSALDLDHFIAARSFWGLQGVLHLSHRPPGHCLTSLLTLTACVWTLAHYIQGPQQGGTEPSVHARGTCGCCNQGFLLQNGQRLSLLFMSAALSHQLRDALRHGLWFCHLGFSTAPLSFHVYILLTMTLPLVIRRLLAKRGGEAERGEGPRVEERLENGEDREEREEERLAMRHAEFQLTRQRQFVV 316
BLAST of EWM29075.1 vs. NCBI_GenBank
Match: gi|961121424|ref|XP_014782630.1| (PREDICTED: transmembrane protein C5orf28 homolog [Octopus bimaculoides] >gi|918299727|gb|KOF74113.1| hypothetical protein OCBIM_22036746mg [Octopus bimaculoides]) HSP 1 Score: 90.8929 bits (224), Expect = 6.639e-18 Identity = 82/247 (33.20%), Postives = 116/247 (46.96%), Query Frame = 0
Query: 17 APSLLLREALLLTACVAGDTLFPSLLAYLYGSPSGTDSPSPPLILRLLLDNFTHATLASMVWWTVLAPPAPWPPAFSRPRPLPLPLYHEHRHLLPRPGHPAHKPCLEILLAFILGSALDLDHFIAARSFWGLQGVLHLSHRPPGHCLTSLLTLTACVWTLAHYIQGPQQGGTEPSVHARGTCGCCNQGFLLQNGQRLSLLFMSAALSHQLRDALRHGLWFCHLGFSTAPLSFHVYILLTMTLPLVIR 263
+P L++ LL+ C+ GD L P + + P L LR+ +DNFTH + + W VL + LP + R L+ L LL +L ++D+DHF+AARSF LQ L L RPP HC T+L+ + L Y + H+R C C + SLLF++A LSH +RDA RHGLW G +T PL + VYIL T+ LP+ ++
Sbjct: 7 SPMLIVYSVLLVLTCLIGDHL-PRMN---HVGPYINRH----LFLRVAIDNFTHGIIGFLSWAIVLDLDLVNTDTNAPVMFLPSSGFVPTRSLMDV----QQSSLLACLLCMVLAMSVDVDHFLAARSF-SLQDALSLPSRPPFHC-TTLIPVVVASSLLMTY-----------AFHSRQFCRC----------FKFSLLFLTAFLSHHIRDARRHGLWLWPFG-ATPPLPYMVYILCTLLLPVAVK 217
BLAST of EWM29075.1 vs. NCBI_GenBank
Match: gi|676494768|ref|XP_009066670.1| (hypothetical protein LOTGIDRAFT_229868 [Lottia gigantea] >gi|556094227|gb|ESO82880.1| hypothetical protein LOTGIDRAFT_229868 [Lottia gigantea]) HSP 1 Score: 83.5741 bits (205), Expect = 2.447e-15 Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = 0
Query: 122 LEILLAFILGSALDLDHFIAARSFWGLQGVLHLSHRPPGHCLTSLLTLTACVWTLAHYIQGPQQGGTEPSVHARGTCGCCNQGFLLQNGQRLSLLFMSAALSHQLRDALRHGLWFCHLGFSTAPLSFHVYILLTMTLPLVIRRL 265
+ +L++F++ ++DLDHF+AA+S + +Q L LS RPP H T ++ L A W + + + L + L LLF+S+ SH +RD R GLWF LG ST P+ +++YI+L + LPL IR L
Sbjct: 90 VSLLMSFVVAVSIDLDHFLAAKSLF-IQDALSLSERPPFHASTIVIILAATCWLIGYILH-------------------------LHCSKILGLLFLSSGFSHHIRDGWRRGLWFPPLG-STQPIPYNLYIVLILILPLFIRYL 206
BLAST of EWM29075.1 vs. NCBI_GenBank
Match: gi|826461858|ref|XP_012534367.1| (PREDICTED: transmembrane protein C5orf28 [Monomorium pharaonis]) HSP 1 Score: 80.4925 bits (197), Expect = 2.169e-14 Identity = 52/151 (34.44%), Postives = 75/151 (49.67%), Query Frame = 0
Query: 116 PAHKPCLEILLAFILGSALDLDHFIAARSFWGLQGVLHLSHRPPGHCLTSLLTLTACVWTLAHYIQGPQQGGTEPSVHARGTCGCCNQGFLLQNGQRLSLLFMSAALSHQLRDALRHGLWFCHLGFSTAPLSFHVYILLTMTLPLVIRRLL 266
P + I F+L S +DLDHFIAARS W + HL RP HC T + L +LA+ Q P +R S + ++A LSH +RD R GLWFC G ST+P+ +++Y+ L M+LP +++ L+
Sbjct: 61 PIARNLNSIFSCFVLASFIDLDHFIAARS-WHIHDATHLQKRPFLHCTTIPILLWMLFISLANTFQSPLL-------------------------ERTSWIILAAFLSHHIRDGTRRGLWFCPFG-STSPIPYYLYVSLCMSLPYILQWLM 184
BLAST of EWM29075.1 vs. NCBI_GenBank
Match: gi|759073045|ref|XP_011346157.1| (PREDICTED: transmembrane protein 267 [Ooceraea biroi] >gi|607355181|gb|EZA49773.1| hypothetical protein X777_11645 [Ooceraea biroi]) HSP 1 Score: 75.485 bits (184), Expect = 1.606e-12 Identity = 51/157 (32.48%), Postives = 76/157 (48.41%), Query Frame = 0
Query: 123 EILLAFILGSALDLDHFIAARSFWGLQGVLHLSHRPPGHCLTSLLTLTACVWTLAHYIQGPQQGGTEPSVHARGTCGCCNQGFLLQNGQRLSLLFMSAALSHQLRDALRHGLWFCHLGFSTAPLSFHVYILLTMTLPLVIRRLLAKRGGEAERGEGP 279
I F+L S +DLDHFIAARS W + HL RP HC T + L A +L++ P ++ S + ++A LSH +RD R GLWFC G ST P+ +++Y+ L M+LP + L++ ++ +GP
Sbjct: 71 SIFSCFLLASFIDLDHFIAARS-WHIHDATHLQKRPFLHCTTIPIMLWALFISLSNAFHSPVL-------------------------EQTSWVILAAFLSHHIRDGTRRGLWFCPFG-STRPIPYYLYVSLCMSLPYALHWLMSLH-TFVQKSDGP 199
BLAST of EWM29075.1 vs. NCBI_GenBank
Match: gi|1070598233|ref|XP_018396388.1| (PREDICTED: transmembrane protein C5orf28 isoform X2 [Cyphomyrmex costatus]) HSP 1 Score: 75.0998 bits (183), Expect = 2.299e-12 Identity = 49/145 (33.79%), Postives = 71/145 (48.97%), Query Frame = 0
Query: 123 EILLAFILGSALDLDHFIAARSFWGLQGVLHLSHRPPGHCLTSLLTLTACVWTLAHYIQGPQQGGTEPSVHARGTCGCCNQGFLLQNGQRLSLLFMSAALSHQLRDALRHGLWFCHLGFSTAPLSFHVYILLTMTLPLVIRRLLA 267
I F+L S +DLDHFIAARS W + HL RP HC T L L L++ P + +S + ++A LSH +RD R GLWFC G ST P+ +++Y+ L+M+LP ++ L++
Sbjct: 71 SIFSCFLLASFVDLDHFIAARS-WHIHDATHLQKRPFLHCTTIPLLLWTFFILLSNTFHSPLM-------------------------EHISWVILAAFLSHHIRDGTRRGLWFCPFG-STRPIPYYLYVSLSMSLPYILHWLMS 188
BLAST of EWM29075.1 vs. NCBI_GenBank
Match: gi|1068407123|ref|XP_018050487.1| (PREDICTED: transmembrane protein C5orf28 isoform X1 [Atta colombica] >gi|1009355780|gb|KYM81083.1| Transmembrane protein C5orf28 [Atta colombica]) HSP 1 Score: 74.3294 bits (181), Expect = 3.495e-12 Identity = 61/207 (29.47%), Postives = 88/207 (42.51%), Query Frame = 0
Query: 61 LRLLLDNFTHATLASMVWWTVLAPPAPWPPAFSRPRPLPLPLYHEHRHLLPRPGHPAHKPCLEILLAFILGSALDLDHFIAARSFWGLQGVLHLSHRPPGHCLTSLLTLTACVWTLAHYIQGPQQGGTEPSVHARGTCGCCNQGFLLQNGQRLSLLFMSAALSHQLRDALRHGLWFCHLGFSTAPLSFHVYILLTMTLPLVIRRLLA 267
+R LDN THAT+ + W ++ S R L IL F+L S +DLDHFIAARS W + HL RP HC T + L L++ P + +S + ++A LSH +RD R GLWFC G ST P+ +++Y+ L M+LP ++ L++
Sbjct: 37 VRAALDNATHATVGGLTWMLIIVLSRK-----SIVRNLN-----------------------SILSCFLLASFVDLDHFIAARS-WHIHDATHLQKRPFLHCTTIPILLWTFFILLSNTFHSPLM-------------------------EHISWVMLAAFLSHHIRDGTRRGLWFCPFG-STRPIPYYLYVSLCMSLPYILHWLMS 188
BLAST of EWM29075.1 vs. NCBI_GenBank
Match: gi|1153815731|ref|XP_020283771.1| (transmembrane protein 267 [Pseudomyrmex gracilis]) HSP 1 Score: 73.1738 bits (178), Expect = 1.169e-11 Identity = 60/206 (29.13%), Postives = 85/206 (41.26%), Query Frame = 0
Query: 62 RLLLDNFTHATLASMVWWTVLAPPAPWPPAFSRPRPLPLPLYHEHRHLLPRPGHPAHKPCLEILLAFILGSALDLDHFIAARSFWGLQGVLHLSHRPPGHCLTSLLTLTACVWTLAHYIQGPQQGGTEPSVHARGTCGCCNQGFLLQNGQRLSLLFMSAALSHQLRDALRHGLWFCHLGFSTAPLSFHVYILLTMTLPLVIRRLLA 267
R L DN THAT+ + W ++ +L R P + + F+L S +D+DHFIAARS W + HL RP HC T + L +L+ P T S L ++A LSH +RD R GLWFC G ST P+ +++Y+ L M LP + L++
Sbjct: 39 RALFDNMTHATVGGLTWMLIV--------------------------ILSRK--PVARNLTSVFSCFLLASLIDVDHFIAARS-WHIHDATHLQKRPFLHCTTIPILLWILFISLSSIFHSPVLEHT-------------------------SWLILAAFLSHHIRDGTRRGLWFCPFG-STRPIPYYLYLSLCMFLPYALYWLMS 189
BLAST of EWM29075.1 vs. NCBI_GenBank
Match: gi|1070171087|ref|XP_018362615.1| (PREDICTED: transmembrane protein C5orf28 [Trachymyrmex cornetzi]) HSP 1 Score: 72.7886 bits (177), Expect = 1.206e-11 Identity = 48/145 (33.10%), Postives = 70/145 (48.28%), Query Frame = 0
Query: 123 EILLAFILGSALDLDHFIAARSFWGLQGVLHLSHRPPGHCLTSLLTLTACVWTLAHYIQGPQQGGTEPSVHARGTCGCCNQGFLLQNGQRLSLLFMSAALSHQLRDALRHGLWFCHLGFSTAPLSFHVYILLTMTLPLVIRRLLA 267
I F+L S +DLDHFIAARS W + HL RP HC T + L L++ P + +S + ++A LSH +RD R GLWFC G ST P+ +++Y+ L M+LP ++ L++
Sbjct: 71 SIFSCFLLASFVDLDHFIAARS-WHIHDATHLQKRPFLHCTTIPILLWTFFILLSNTFHSPLM-------------------------EHISWVILAAFLSHHIRDGTRRGLWFCPFG-STRPIPYYLYVSLCMSLPYILHWLMS 188
BLAST of EWM29075.1 vs. NCBI_GenBank
Match: gi|751218988|ref|XP_011162560.1| (PREDICTED: transmembrane protein C5orf28 [Solenopsis invicta]) HSP 1 Score: 71.2478 bits (173), Expect = 4.347e-11 Identity = 49/144 (34.03%), Postives = 69/144 (47.92%), Query Frame = 0
Query: 123 EILLAFILGSALDLDHFIAARSFWGLQGVLHLSHRPPGHCLTSLLTLTACVWTLAHYIQGPQQGGTEPSVHARGTCGCCNQGFLLQNGQRLSLLFMSAALSHQLRDALRHGLWFCHLGFSTAPLSFHVYILLTMTLPLVIRRLL 266
I F+L S +DLDHFIAARS W + HL RP HC T + L +L++ P T S + ++A LSH +RD R GLWFC G ST P+ +++Y+ L M+LP ++ L+
Sbjct: 68 SIFSCFLLASFIDLDHFIAARS-WHIHDATHLQKRPFLHCTTIPILLWILFISLSNVFHSPLLEHT-------------------------SWVILAAFLSHHIRDGTRRGLWFCPFG-STHPIPYYLYVSLCMSLPYILHWLM 184 The following BLAST results are available for this feature:
BLAST of EWM29075.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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