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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100024g28.4330.mrna |
| Orig protein id | gnl|cribi|Naga_100024g28.4330 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1048240..1049670 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1608 ID=rna1608|Name=rna1608|organism=Nannochloropsis gaditana|type=mRNA|length=1977bp
ACCTCCTGCTATCGCTTTTTGAACAAATGATGATTGCATATCAGGCAACT
GCATGCGTGCATTAAAGCACAATCATAGGATAGTTATCCTTCCTACCTTT
ATCTTCCTAATTATTCTTAAATCTTTACTCTCGCGTCCGTACTCTGTCTT
GCCGCTCAGGTGGGCATATGCCAATACCTGATTATACCCGTATTAGCTCA
CTTTCCTCGTGCCTCTTGCTTCGGGTCATGTACTCGTACTCCTGTTTCTC
CTACCGAAGTACCAGATGTGGTTCACCGACATCACACTTTAAAAACTTCC
ATTTCTTTCTCCGCCTTGATCAGGGTGCTGCACAATGGCTGCCTCTCGAC
TAGACTATCAAAATCTTTTTGGAAGCTCAGACGAAGAAAGCGACGGCGAC
GAGGGTGAGCAACAACAGCAAAGTACTAGCACCGCCGCTCCTAAGGCATC
TTCCGGTTCCTCTACCATCAAGCCCTCGGCTCTTGGCAAAAGCAGCGACG
ACAGCAGCAGCGACGAAGACAGCAGTGAGGAGGACGAACATTTGTCGGCC
AAGAAAAGGTTACAACAAAAAGGAGTCCCGCTAGCATCCTCGTCCGACGA
GGAAAGTGACAATGAGGAAGAAGGTGACGTTCCTCGGCCCGCGGGTAAGG
CGCGGACCACGGGGTCTGAGGCGTTGAGGAGAGCGACGGCCGACTTCGAT
GACGAGGAAGAAGAAGAGGAGCCGCGTAGGCCCAATGTGCTCCCCGACCT
GAGCAGTGATGGGAACAGCAGCAGTAGTGGTAGCGAAAGCGAGTCCTCGG
ACGATGAGGGTGATTCAAGGCGGCGAAAACGAGGGGCGGAGAAAAGGAAG
CACCGACTGAAGACAAAGGGGAAACGCCCGAGCAAAGGGGTAGACAAAGG
GAGAGACGGGAGGGGGAAGGCAGGCAAACAAGTGAGAGACCGTGGGCAAG
GGGCCGATGAGGATGGAGGGGCTGCAGCCGGGACCGGGGCAGCCTCGGAG
CCCCGGCGGGCGGCGCGTGAGCTAACGGCAGTCGAGCAAGCCTTGGCGTC
TTTCAAGCGCAATCGGATCCAAAAGCTGCCGGACGCGCAGGTTCAAGAGA
TGACGCAACACCTCATTACCCTGATGGAAACGGCGGCGAAAGAGGACCGA
CAGGCTTTGCTACAGCACCGTCCGGCCACGCAAAAGTTGAAGCGGCTGAC
CGAGGTGCTGGACTTGCTCCGAAGCAAGCATCTACAAGGCGCCCTGGTCG
ACAACGGGCAAGTACTTGGCTTGATTCGACTCTGGTTGCAGCCCTTGCCC
GACAAGAGCCTTCCCCTTTACGCAGTCCGGACGCCGATGATCGATTACTT
GGTGACGGCGAGGGTTGAGGTGCATCGCTTGAAGGAGAGCGGGATTGGGA
GGGTGATCCAACAACTGAAAAAACACCCGGAAGAGACGGTGGAGAACAAG
GCTAAGTTGACGGAAATCGTGGACAATTGGTCCCGGCTGATCACAGGGAA
AGGGACGACGTTGAAGAGCCGAACCAGCGAGGAGGAGATGGAGGGTCGGC
AGGGACCGGCGGAGCGGGAGGGGGGAGAGGGGGGCTTCATCATGTCCACC
ACCTCGAGGGGGGTCGTGATCCCCATCCGGACGGGCTTCAATTTCAAAAA
GGTCGCGTTGACCTTCCGGGAGGAGTTTGACCGGGGGCAAGGGAAGGAGG
ACGAGGCCATGGAGGTGGCGGAGAGGGAGCCTCGAGACGGATCCGAGAGT
CGTACAAATCGGGTTAGGAAGGCGTTGAAGGACATGGGGAGGGCGGGAGG
GAAGAAGCTGCGGCATGAAAGTGTGCAGCATGGTAATTAGAGGAGAGCGA
GGGCGGGGGGGAATGCAGTGACGCGTCGCTGGAGGGGTGTACTGGGCAGA
GAGGGAACAAAGAAGGTGGAATGGACCGCCATGGTCCGGAGAAAGAAACG
TCGAAAACACCGTTAAGAAACCCTTGG back to topprotein sequence of rna1608 >rna1608-protein ID=rna1608-protein|Name=rna1608|organism=Nannochloropsis gaditana|type=polypeptide|length=203bp
MLITCRPMGKHDNRDNRHHSEEKRRHGNRDDDDIVRQDHEQRKKGKKRKR
EEEVEIEAGSLSSSSYSSDSSSESSVTSSSLDSRYSKRKSSKKEKNEREE
KGKTKKGKKARKETKKRKHKKDKKKKYEKEDKKKNKKRKKESKRRKSSSH
TAATSSDSESDDDAPRSAISGKKIKMKLKRDAADMQMERGRKDFLRFMNS
QFD back to topmRNA from alignment at CM002457.1:1048240..1049670+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1608 ID=rna1608|Name=rna1608|organism=Nannochloropsis gaditana|type=mRNA|length=1431bp|location=Sequence derived from alignment at CM002457.1:1048240..1049670+ (Nannochloropsis gaditana)
ACGGACGCGAGAGTAAAGATTTAAGAATAATTAGGAAGATAAAGGTAGGA
AGGATAACTATCCTATGATTGTGCTTTAATGCACGCATGCAGTTGCCTGA
TATGCAATCATCATTTGTTCAAAAAGCGATAGCAGGAGGTTATAAGAAGT
TGCTTTAGCTAAAGATGAGAGCGTGCTAAATCCTGGACGAGACATTCTCA
ATGCGAAGTGCTCAAACACTAGCCAAGAGATGTGATTTGAGGACTTTTAA
TCGTTGTTAGGTTGATTCTCCCGGCCatcttttcttgctttttctctctc
cgTGGTGCCCGATGCAACTTGACGGGCTGTGGGAAAGTCTAAGGACTGCC
GACTGACACTACGAAACCCAGACTATCTATGGTTACCTTGAAGAATGTTA
AAGGCTTTGCAGATCTATGCTGATAACATGCAGGTCCGTAACTTTTGTCG
AAACGATTTATGAGCAGGGTCATCGATCGTGAACATATCGATCGACATTC
CCCTTGGAGAAGTCTCAGTTCCATACGCGTTGTGGTAGGCATGGCCACAA
TTCCTCATACATAAAGGAAAATACTATTTGACCATGTATTTGAATACATA
TATATACGCGAGGGCTCGTCCTTCTTGCTCATATTTGCTACCGTTCGACG
CAAGCAGGCCGATGGGCAAGCACGACAATCGTGATAATCGTCATCACAGT
GAAGAAAAGCGTCGTCATGGTAACAGAGATGACGACGACATCGTGCGACA
GGATCATGAGCagcgaaagaaggggaagaaacggaagcgggaggaagaag
tggagaTAGAAGCGGGGTCcctctcgtcgtcctcttatTCCTCGGATTCA
TCTAGTGAAAGCAGCGTGACCTCATCTTCATTAGATTCCCGTTATAGCAA
GCGAAAGTCgtcgaagaaagagaaaaatgaaagggaggaaaaaggaaaaa
cgaAGGTAAGTAGATCAAAAGGGTTTTATTTTGAAACTGCGTGTTGAACT
CGGCAACCGAATGTTATTTTTTCGCCCACATatagaaaggaaagaaggcc
aggaaggagacaaaaaAGCGAAAGCACAAGAAagacaagaaaaaaaagta
tgagaaagaggacaagaaaaagaacaaaaagcggaagaaagagagTAAAC
GAAGGaagtcttcctcccacacgGCGGCCACCAGTAGCGACTCAGAAAGC
GATGACGATGCTCCACGTTCTGCAATttcggggaagaagataaAGATGAA
GTTGAAGCGAGACGCAGCAGATATGCAAATGGAGAGAGGCCGAAAAGATT
TTCTGCGTTTCATGAATTCACAGTTTGATTGACCACTGAGATTAAAGGCT
CAAAGTAATGCGGCCCACTCAATATGGATCATTGGAAAATAAATTCAAAA
ATTGAACCCAAAAACAAAGtatctttttttt back to topCoding sequence (CDS) from alignment at CM002457.1:1048240..1049670+ >rna1608 ID=rna1608|Name=rna1608|organism=Nannochloropsis gaditana|type=CDS|length=1836bp|location=Sequence derived from alignment at CM002457.1:1048240..1049670+ (Nannochloropsis gaditana)
ATGCTGATAACATGCAGGCCGATGGGCAAGCACGACAATCGTGATAATCG
TCATCACAGTGAAGAAAAGCGTCGTCATGGTAACAGAGATGACGACGACA
TCGTGCGACAGGATCATGAGCagcgaaagaaggggaagaaacggaagcgg
gaggaagaagtggagaTAGAAGCGGGGTCcctctcgtcgtcctcttatTC
CTCGGATTCATCTAGTGAAAGCAGCGTGACCTCATCTTCATTAGATTCCC
GTTATAGCAAGCGAAAGTCgtcgaagaaagagaaaaatgaaagggaggaa
aaaggaaaaacgaAGaaaggaaagaaggccaggaaggagacaaaaaAGCG
AAAGCACAAGAAagacaagaaaaaaaagtatgagaaagaggacaagaaaa
agaacaaaaagcggaagaaagagagTAAACGAAGGaagtcttcctcccac
acgGCGGCCACCAGTAGCGACTCAGAAAGCGATGACGATGCTCCACGTTC
TGCAATttcggggaagaagataaAGATGAAGTTGAAGCGAGACGCAGCAG
ATATGCAAATGGAGAGAGGCCGAAAAGATTTTCTGCGTTTCATGAATTCA
CAGTTTGATTGAATGCTGATAACATGCAGGCCGATGGGCAAGCACGACAA
TCGTGATAATCGTCATCACAGTGAAGAAAAGCGTCGTCATGGTAACAGAG
ATGACGACGACATCGTGCGACAGGATCATGAGCagcgaaagaaggggaag
aaacggaagcgggaggaagaagtggagaTAGAAGCGGGGTCcctctcgtc
gtcctcttatTCCTCGGATTCATCTAGTGAAAGCAGCGTGACCTCATCTT
CATTAGATTCCCGTTATAGCAAGCGAAAGTCgtcgaagaaagagaaaaat
gaaagggaggaaaaaggaaaaacgaAGaaaggaaagaaggccaggaagga
gacaaaaaAGCGAAAGCACAAGAAagacaagaaaaaaaagtatgagaaag
aggacaagaaaaagaacaaaaagcggaagaaagagagTAAACGAAGGaag
tcttcctcccacacgGCGGCCACCAGTAGCGACTCAGAAAGCGATGACGA
TGCTCCACGTTCTGCAATttcggggaagaagataaAGATGAAGTTGAAGC
GAGACGCAGCAGATATGCAAATGGAGAGAGGCCGAAAAGATTTTCTGCGT
TTCATGAATTCACAGTTTGATTGAATGCTGATAACATGCAGGCCGATGGG
CAAGCACGACAATCGTGATAATCGTCATCACAGTGAAGAAAAGCGTCGTC
ATGGTAACAGAGATGACGACGACATCGTGCGACAGGATCATGAGCagcga
aagaaggggaagaaacggaagcgggaggaagaagtggagaTAGAAGCGGG
GTCcctctcgtcgtcctcttatTCCTCGGATTCATCTAGTGAAAGCAGCG
TGACCTCATCTTCATTAGATTCCCGTTATAGCAAGCGAAAGTCgtcgaag
aaagagaaaaatgaaagggaggaaaaaggaaaaacgaAGaaaggaaagaa
ggccaggaaggagacaaaaaAGCGAAAGCACAAGAAagacaagaaaaaaa
agtatgagaaagaggacaagaaaaagaacaaaaagcggaagaaagagagT
AAACGAAGGaagtcttcctcccacacgGCGGCCACCAGTAGCGACTCAGA
AAGCGATGACGATGCTCCACGTTCTGCAATttcggggaagaagataaAGA
TGAAGTTGAAGCGAGACGCAGCAGATATGCAAATGGAGAGAGGCCGAAAA
GATTTTCTGCGTTTCATGAATTCACAGTTTGATTGA back to top
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