EWM29072.1, cds1604 (CDS) Nannochloropsis gaditana

Overview
NameEWM29072.1
Unique Namecds1604
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1048656..1048672 +
Alignment locationCM002457.1:1048897..1049194 +
Alignment locationCM002457.1:1049275..1049571 +

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Properties
Property NameValue
Protein idEWM29072.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100024g28.4330.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1048656..1048672 +
CM002457.1supercontigCM002457.1:1048897..1049194 +
CM002457.1supercontigCM002457.1:1049275..1049571 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29072.1 vs. NCBI_GenBank
Match: gi|585111591|gb|EWM29072.1| (hypothetical protein Naga_100024g28 [Nannochloropsis gaditana])

HSP 1 Score: 388.652 bits (997), Expect = 2.821e-136
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0 
Query:    1 MLITCRPMGKHDNRDNRHHSEEKRRHGNRDDDDIVRQDHEQRKKGKKRKREEEVEIEAGSLSSSSYSSDSSSESSVTSSSLDSRYSKRKSSKKEKNEREEKGKTKKGKKARKETKKRKHKKDKKKKYEKEDKKKNKKRKKESKRRKSSSHTAATSSDSESDDDAPRSAISGKKIKMKLKRDAADMQMERGRKDFLRFMNSQFD 203
            MLITCRPMGKHDNRDNRHHSEEKRRHGNRDDDDIVRQDHEQRKKGKKRKREEEVEIEAGSLSSSSYSSDSSSESSVTSSSLDSRYSKRKSSKKEKNEREEKGKTKKGKKARKETKKRKHKKDKKKKYEKEDKKKNKKRKKESKRRKSSSHTAATSSDSESDDDAPRSAISGKKIKMKLKRDAADMQMERGRKDFLRFMNSQFD
Sbjct:    1 MLITCRPMGKHDNRDNRHHSEEKRRHGNRDDDDIVRQDHEQRKKGKKRKREEEVEIEAGSLSSSSYSSDSSSESSVTSSSLDSRYSKRKSSKKEKNEREEKGKTKKGKKARKETKKRKHKKDKKKKYEKEDKKKNKKRKKESKRRKSSSHTAATSSDSESDDDAPRSAISGKKIKMKLKRDAADMQMERGRKDFLRFMNSQFD 203
The following BLAST results are available for this feature:
BLAST of EWM29072.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111591|gb|EWM29072.1|2.821e-136100.00hypothetical protein Naga_100024g28 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1608rna1608Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications