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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100024g32.4336.mrna |
| Orig protein id | gnl|cribi|Naga_100024g32.4336 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1041868..1043077 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1605 ID=rna1605|Name=rna1605|organism=Nannochloropsis gaditana|type=mRNA|length=477bp
ATGGGCTCACGCATCTATTGTATGAGTAGACAGGGGGGGGGGGAGGGAGG
AAGGTCGTGGAGATTGGATGGACGAGGAAGTTTGGTGCGTGCGCTGACGA
AACACTCTAATTTCAAGAGAACCAGCTTTGTAAACCGCCTTGTGTTTCAT
TTTCCAATTTCTGGGATGCAGGGGAAGAAAGAAAATGGTCGGAATGGGAA
ACCTAGGGATGGAAAGCTACATACATACCGAAGCAGCTCTTGTGTGTCTA
CGACTATCATCGTCACTAACGGATCCTTTCGTGAGTCAAATCTTAAGAAT
GTAGGGGACGACGCGAACAAAGAAATAAAACCAGAGTCTCCGCTTACGCT
CTTCTCATGTCTCTGGTTAACAGTGGGTAGCCAGGCCCCGGCAGCCGACA
TGCCCCCCCCCTTAGGCTGGCAATTACTTGTCGAGGTCACGTACACGGAA
GCTGCTTCATCTTCTTCGATCCAGTGA back to topprotein sequence of rna1605 >rna1605-protein ID=rna1605-protein|Name=rna1605|organism=Nannochloropsis gaditana|type=polypeptide|length=253bp
MMEGHAQGDDELQFIRVPETSVSNQASGQTPYAPMGAAPASGPPPPPAGD
ALAFIKQSRHPVAAAFHFVFKALAIFFYLFGGFFSSNFVFICVVCILLLA
FDFWTVKNVTGRLLVGLRWWNNVRDDGSNEWVFESVENPGEIHPADARLF
WTGLYVTPIVWSVFFLVALLKFSVQWLVIVFVALVLSGANIVGYYKCSND
QKKKVQNVVQGAAFKTAFGLGTSAVQSFISSTFGQQQQGGGNAEGPHGPP
SHV back to topmRNA from alignment at CM002457.1:1041868..1043077- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1605 ID=rna1605|Name=rna1605|organism=Nannochloropsis gaditana|type=mRNA|length=1210bp|location=Sequence derived from alignment at CM002457.1:1041868..1043077- (Nannochloropsis gaditana)
ATGATGGAAGGGCACGCCCAAGGAGACGACGAATTACAGGTGATTGACAC
ACGAAGTGAACAGTGTCTCATGTTCAGGCTCGTGAGGTTGTTGCGGACAT
GATGGGTTTCCTGGGACCTTTTTCACGTCCTGACTTATTTCTTCGTGAAA
TCGCGTTATTCTTCGATTTAAATACATTCACGCCCTTACGACCTCACTCC
ATCGTCCCTGGATTCCTATCTATAGTTTATCAGGGTCCCTGAGACCTCAG
TTTCGAACCAAGCCTCAGGACAGACCCCGTATGCCCCCATGGGCGCCGCC
CCGGCCTCCGGGCCGCCTCCTCCCCCCGCCGGCGACGCCCTGGCTTTCAT
CAAACAGTCCAGGGTACGTGTTCGCAATCATCAAGAGATGCATACATACC
TTTTCGAGTTGCTGCGGGGATTTGAAGGGCTAAGTGGAACTTGGAGAAAG
TGAGGACGCTTACTCACAAGCCTGCATCAGGCCCGGCCCCTTCTGTTTCC
CACCTCTCATCCTTGGTGCTGGTTGCGCATTTTGCGTTCTATTTGTTGCA
GTCTTAAAGCTCCGTGCTTCCTACTGATTAAATCCCTAATGTCGGACTTT
CTCTTGCCTTTTCACCCCACCATAGCATCCCGTCGCGGCAGCATTTCACT
TCGTCTTCAAGGCTCTAGCCATTTTTTTCTACCTTTTCGGTGGCTTTTTC
TCTTCCAATTTCGTCTTTATCTGCGTGGTTTGCATCTTGTTGCTGGCTTT
CGATTTCTGGACAGTTAAGAATGTCACGGGGCGCCTCCTCGTCGGCCTCC
GGTGGTGGAACAACGTGCGGGACGATGGCAGCAATGAGTGGGTGTTCGAA
TCGGTCGAGAACCCGGGAGAAATCCACCCCGCGGATGCTCGCCTGTTTTG
GACTGGATTGTACGTGACGCCCATTGTATGGTCGGTCTTCTTCTTGGTGG
CCCTCCTTAAATTCTCCGTGCAATGGTTGGTGATCGTTTTCGTGGCTTTG
GTTCTGAGCGGGGCGAATATTGTCGGATACTACAAATGCAGCAACGACCA
AAAGAAGAAGGTACAAAACGTGGTGCAAGGCGCGGCTTTCAAGACGGCTT
TCGGTCTGGGAACGTCGGCGGTGCAAAGCTTCATTTCATCGACGTTTGGG
CAGCAGCAACAGGGGGGGGGGAACGCAGAGGGGCCACACGGACCCCCTTC
GCACGTGTAG back to topCoding sequence (CDS) from alignment at CM002457.1:1041868..1043077- >rna1605 ID=rna1605|Name=rna1605|organism=Nannochloropsis gaditana|type=CDS|length=2286bp|location=Sequence derived from alignment at CM002457.1:1041868..1043077- (Nannochloropsis gaditana)
CATCCCGTCGCGGCAGCATTTCACTTCGTCTTCAAGGCTCTAGCCATTTT
TTTCTACCTTTTCGGTGGCTTTTTCTCTTCCAATTTCGTCTTTATCTGCG
TGGTTTGCATCTTGTTGCTGGCTTTCGATTTCTGGACAGTTAAGAATGTC
ACGGGGCGCCTCCTCGTCGGCCTCCGGTGGTGGAACAACGTGCGGGACGA
TGGCAGCAATGAGTGGGTGTTCGAATCGGTCGAGAACCCGGGAGAAATCC
ACCCCGCGGATGCTCGCCTGTTTTGGACTGGATTGTACGTGACGCCCATT
GTATGGTCGGTCTTCTTCTTGGTGGCCCTCCTTAAATTCTCCGTGCAATG
GTTGGTGATCGTTTTCGTGGCTTTGGTTCTGAGCGGGGCGAATATTGTCG
GATACTACAAATGCAGCAACGACCAAAAGAAGAAGGTACAAAACGTGGTG
CAAGGCGCGGCTTTCAAGACGGCTTTCGGTCTGGGAACGTCGGCGGTGCA
AAGCTTCATTTCATCGACGTTTGGGCAGCAGCAACAGGGGGGGGGGAACG
CAGAGGGGCCACACGGACCCCCTTCGCACGTGTAGTTTATCAGGGTCCCT
GAGACCTCAGTTTCGAACCAAGCCTCAGGACAGACCCCGTATGCCCCCAT
GGGCGCCGCCCCGGCCTCCGGGCCGCCTCCTCCCCCCGCCGGCGACGCCC
TGGCTTTCATCAAACAGTCCAGGATGATGGAAGGGCACGCCCAAGGAGAC
GACGAATTACAGCATCCCGTCGCGGCAGCATTTCACTTCGTCTTCAAGGC
TCTAGCCATTTTTTTCTACCTTTTCGGTGGCTTTTTCTCTTCCAATTTCG
TCTTTATCTGCGTGGTTTGCATCTTGTTGCTGGCTTTCGATTTCTGGACA
GTTAAGAATGTCACGGGGCGCCTCCTCGTCGGCCTCCGGTGGTGGAACAA
CGTGCGGGACGATGGCAGCAATGAGTGGGTGTTCGAATCGGTCGAGAACC
CGGGAGAAATCCACCCCGCGGATGCTCGCCTGTTTTGGACTGGATTGTAC
GTGACGCCCATTGTATGGTCGGTCTTCTTCTTGGTGGCCCTCCTTAAATT
CTCCGTGCAATGGTTGGTGATCGTTTTCGTGGCTTTGGTTCTGAGCGGGG
CGAATATTGTCGGATACTACAAATGCAGCAACGACCAAAAGAAGAAGGTA
CAAAACGTGGTGCAAGGCGCGGCTTTCAAGACGGCTTTCGGTCTGGGAAC
GTCGGCGGTGCAAAGCTTCATTTCATCGACGTTTGGGCAGCAGCAACAGG
GGGGGGGGAACGCAGAGGGGCCACACGGACCCCCTTCGCACGTGTAGTTT
ATCAGGGTCCCTGAGACCTCAGTTTCGAACCAAGCCTCAGGACAGACCCC
GTATGCCCCCATGGGCGCCGCCCCGGCCTCCGGGCCGCCTCCTCCCCCCG
CCGGCGACGCCCTGGCTTTCATCAAACAGTCCAGGATGATGGAAGGGCAC
GCCCAAGGAGACGACGAATTACAGCATCCCGTCGCGGCAGCATTTCACTT
CGTCTTCAAGGCTCTAGCCATTTTTTTCTACCTTTTCGGTGGCTTTTTCT
CTTCCAATTTCGTCTTTATCTGCGTGGTTTGCATCTTGTTGCTGGCTTTC
GATTTCTGGACAGTTAAGAATGTCACGGGGCGCCTCCTCGTCGGCCTCCG
GTGGTGGAACAACGTGCGGGACGATGGCAGCAATGAGTGGGTGTTCGAAT
CGGTCGAGAACCCGGGAGAAATCCACCCCGCGGATGCTCGCCTGTTTTGG
ACTGGATTGTACGTGACGCCCATTGTATGGTCGGTCTTCTTCTTGGTGGC
CCTCCTTAAATTCTCCGTGCAATGGTTGGTGATCGTTTTCGTGGCTTTGG
TTCTGAGCGGGGCGAATATTGTCGGATACTACAAATGCAGCAACGACCAA
AAGAAGAAGGTACAAAACGTGGTGCAAGGCGCGGCTTTCAAGACGGCTTT
CGGTCTGGGAACGTCGGCGGTGCAAAGCTTCATTTCATCGACGTTTGGGC
AGCAGCAACAGGGGGGGGGGAACGCAGAGGGGCCACACGGACCCCCTTCG
CACGTGTAGTTTATCAGGGTCCCTGAGACCTCAGTTTCGAACCAAGCCTC
AGGACAGACCCCGTATGCCCCCATGGGCGCCGCCCCGGCCTCCGGGCCGC
CTCCTCCCCCCGCCGGCGACGCCCTGGCTTTCATCAAACAGTCCAGGATG
ATGGAAGGGCACGCCCAAGGAGACGACGAATTACAG back to top
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