EWM29078.1, cds1601 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29078.1 vs. NCBI_GenBank
Match: gi|585111597|gb|EWM29078.1| (hypothetical protein Naga_100024g32 [Nannochloropsis gaditana]) HSP 1 Score: 514.998 bits (1325), Expect = 0.000e+0 Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
Query: 1 MMEGHAQGDDELQFIRVPETSVSNQASGQTPYAPMGAAPASGPPPPPAGDALAFIKQSRHPVAAAFHFVFKALAIFFYLFGGFFSSNFVFICVVCILLLAFDFWTVKNVTGRLLVGLRWWNNVRDDGSNEWVFESVENPGEIHPADARLFWTGLYVTPIVWSVFFLVALLKFSVQWLVIVFVALVLSGANIVGYYKCSNDQKKKVQNVVQGAAFKTAFGLGTSAVQSFISSTFGQQQQGGGNAEGPHGPPSHV 253
MMEGHAQGDDELQFIRVPETSVSNQASGQTPYAPMGAAPASGPPPPPAGDALAFIKQSRHPVAAAFHFVFKALAIFFYLFGGFFSSNFVFICVVCILLLAFDFWTVKNVTGRLLVGLRWWNNVRDDGSNEWVFESVENPGEIHPADARLFWTGLYVTPIVWSVFFLVALLKFSVQWLVIVFVALVLSGANIVGYYKCSNDQKKKVQNVVQGAAFKTAFGLGTSAVQSFISSTFGQQQQGGGNAEGPHGPPSHV
Sbjct: 1 MMEGHAQGDDELQFIRVPETSVSNQASGQTPYAPMGAAPASGPPPPPAGDALAFIKQSRHPVAAAFHFVFKALAIFFYLFGGFFSSNFVFICVVCILLLAFDFWTVKNVTGRLLVGLRWWNNVRDDGSNEWVFESVENPGEIHPADARLFWTGLYVTPIVWSVFFLVALLKFSVQWLVIVFVALVLSGANIVGYYKCSNDQKKKVQNVVQGAAFKTAFGLGTSAVQSFISSTFGQQQQGGGNAEGPHGPPSHV 253
BLAST of EWM29078.1 vs. NCBI_GenBank
Match: gi|553177004|ref|XP_005852425.1| (putative fam18-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422296107|gb|EKU23406.1| putative fam18-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 358.607 bits (919), Expect = 4.814e-124 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
Query: 35 MGAAPASGPPPPPAGDALAFIKQSRHPVAAAFHFVFKALAIFFYLFGGFFSSNFVFICVVCILLLAFDFWTVKNVTGRLLVGLRWWNNVRDDGSNEWVFESVENPGEIHPADARLFWTGLYVTPIVWSVFFLVALLKFSVQWLVIVFVALVLSGANIVGYYKCSNDQKKKVQNVVQ 210
MGAAPASGPPPPPAGDALAFIKQSRHPVAAAFHFVFKALAIFFYLFGGFFSSNFVFICVVCILLLAFDFWTVKNVTGRLLVGLRWWNNVRDDGSNEWVFESVENPGEIHPADARLFWTGLYVTPIVWSVFFLVALLKFSVQWLVIVFVALVLSGANIVGYYKCSNDQKKKVQNVVQ
Sbjct: 1 MGAAPASGPPPPPAGDALAFIKQSRHPVAAAFHFVFKALAIFFYLFGGFFSSNFVFICVVCILLLAFDFWTVKNVTGRLLVGLRWWNNVRDDGSNEWVFESVENPGEIHPADARLFWTGLYVTPIVWSVFFLVALLKFSVQWLVIVFVALVLSGANIVGYYKCSNDQKKKVQNVVQ 176
BLAST of EWM29078.1 vs. NCBI_GenBank
Match: gi|669167926|ref|XP_008619492.1| (hypothetical protein SDRG_15106 [Saprolegnia diclina VS20] >gi|530728856|gb|EQC27098.1| hypothetical protein SDRG_15106 [Saprolegnia diclina VS20]) HSP 1 Score: 244.588 bits (623), Expect = 6.353e-78 Identity = 124/252 (49.21%), Postives = 165/252 (65.48%), Query Frame = 0
Query: 7 QGDDELQFIRVPETSVSNQASGQTPYAPMGAAPASGPPPPPA-----GDALAFIKQSRHPVAAAFHFVFKALAIFFYLFGGFFSSNFVFICVVCILLLAFDFWTVKNVTGRLLVGLRWWNNVRDDGSNEWVFESVENPGEIHPADARLFWTGLYVTPIVWSVFFLVALLKFSVQWLVIVFVALVLSGANIVGYYKCSNDQKKKVQNVVQGAAFKTAFGLGTSAVQSFISSTFGQQQQGGGNAEGPHGPPSHV 253
+ L+FI V E +VS +P + A +S P P A G A ++Q++HPVAA FH +FKALA+ YLFGG FS++FVF+ V+CILLLAFDFWTVKNV+GRLLVGLRWWN V +DG++EW+FES E+ E+ P DA++FWTGLY P VW +F L+A+LKF+++W +I VAL+LS ANIVGY KCS D K K+++++ A + S+ S I ST G G A PPS +
Sbjct: 5 EKSKALEFIEVDEPTVS------SPRSRATTASSSAPASPQASATLLGSVTASVRQAKHPVAAVFHVLFKALALLAYLFGGIFSNSFVFVFVICILLLAFDFWTVKNVSGRLLVGLRWWNRVNEDGTSEWIFESHEDMTELDPLDAKVFWTGLYGAPGVWVLFLLIAVLKFNLEWALIAIVALMLSAANIVGYTKCSKDAKNKMKSMMASGALEAL----QSSTGSTILSTLGGMAFGNAPARPNARPPSEI 246
BLAST of EWM29078.1 vs. NCBI_GenBank
Match: gi|813184490|ref|XP_012206417.1| (hypothetical protein SPRG_11997 [Saprolegnia parasitica CBS 223.65] >gi|641528647|gb|KDO22860.1| hypothetical protein SPRG_11997 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 244.202 bits (622), Expect = 1.026e-77 Identity = 125/255 (49.02%), Postives = 166/255 (65.10%), Query Frame = 0
Query: 6 AQGDDE--LQFIRVPETSVSNQASGQTPYAPMGAAPASGPPPPPA-----GDALAFIKQSRHPVAAAFHFVFKALAIFFYLFGGFFSSNFVFICVVCILLLAFDFWTVKNVTGRLLVGLRWWNNVRDDGSNEWVFESVENPGEIHPADARLFWTGLYVTPIVWSVFFLVALLKFSVQWLVIVFVALVLSGANIVGYYKCSNDQKKKVQNVVQGAAFKTAFGLGTSAVQSFISSTFGQQQQGGGNAEGPHGPPSHV 253
+ GD L+FI V E +VS +P + +S P P A G A ++Q++HPVAA FH +FKALA+ YLFGG FS++FVF+ V+CILLLAFDFWTVKNV+GRLLVGLRWWN V +DG++EW+FES E+ E+ P DA++FWTGLY P VW +F L+A+LKF+++W +I VAL+LS ANIVGY KCS D K K+++++ A + S+ S I ST G G A PPS +
Sbjct: 2 SSGDKSKALEFIEVDEPAVS------SPRSRAATVSSSAPASPQASATLLGSVTASVRQAKHPVAAVFHVLFKALALLAYLFGGLFSNSFVFVFVICILLLAFDFWTVKNVSGRLLVGLRWWNRVNEDGTSEWIFESHEDMTELDPLDAKVFWTGLYGAPCVWVLFLLIAVLKFNLEWALIAIVALMLSMANIVGYTKCSKDAKNKMKSMMASGALEAL----QSSTGSTILSTLGGMAFGSAPARPNARPPSEI 246
BLAST of EWM29078.1 vs. NCBI_GenBank
Match: gi|813219522|ref|XP_012211138.1| (hypothetical protein SPRG_16439 [Saprolegnia parasitica CBS 223.65] >gi|641523238|gb|KDO18153.1| hypothetical protein SPRG_16439 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 241.506 bits (615), Expect = 1.083e-76 Identity = 124/252 (49.21%), Postives = 164/252 (65.08%), Query Frame = 0
Query: 6 AQGDDE--LQFIRVPETSVSNQA--SGQTPYAPMGAAPASGPPPPPAGDALAFIKQSRHPVAAAFHFVFKALAIFFYLFGGFFSSNFVFICVVCILLLAFDFWTVKNVTGRLLVGLRWWNNVRDDGSNEWVFESVENPGEIHPADARLFWTGLYVTPIVWSVFFLVALLKFSVQWLVIVFVALVLSGANIVGYYKCSNDQKKKVQNVVQGAAFKTAFGLGTSAVQSFISSTFGQQQQGGGNAEGPHGPPSHV 253
+ GD L+FI V E + S A S P +P +A G A ++Q++HPVAA FH +FKALA+ YLFGG FS++FVF+ V+CILLLAFDFWTVKNV+GRLLVGLRWWN V +DG++EW+FES E+ E+ P DA++FWTGLY P VW +F L+A+LKF+++W +I VAL+LS ANIVGY KCS D K K+++++ A + S+ S I ST G G A PPS +
Sbjct: 2 SSGDKSKALEFIEVDEPTRSRAATVSSSAPASPQASATL-------LGSVTASVRQAKHPVAAVFHVLFKALALLAYLFGGLFSNSFVFVFVICILLLAFDFWTVKNVSGRLLVGLRWWNRVNEDGTSEWIFESHEDMTELDPLDAKVFWTGLYGAPCVWVLFLLIAVLKFNLEWALIAIVALMLSTANIVGYTKCSKDAKNKMKSMMASGALEAL----QSSTGSTILSTLGGMAFGSAPARPNARPPSEI 242
BLAST of EWM29078.1 vs. NCBI_GenBank
Match: gi|673047935|ref|XP_008877928.1| (hypothetical protein H310_12582 [Aphanomyces invadans] >gi|574466557|gb|ETV93586.1| hypothetical protein H310_12582 [Aphanomyces invadans]) HSP 1 Score: 233.032 bits (593), Expect = 2.867e-73 Identity = 119/247 (48.18%), Postives = 160/247 (64.78%), Query Frame = 0
Query: 11 ELQFIRVP-ETSVSNQASGQTPYAPMGAAPASGPPPPPAGDAL-----AFIKQSRHPVAAAFHFVFKALAIFFYLFGGFFSSNFVFICVVCILLLAFDFWTVKNVTGRLLVGLRWWNNVRDDGSNEWVFESVENPGEIHPADARLFWTGLYVTPIVWSVFFLVALLKFSVQWLVIVFVALVLSGANIVGYYKCSNDQKKKVQNVVQGAAFKTAFGLGTSAVQSFIS--STFGQQQQGGGNAEGPHGP 249
+L+FI VP E S S ++ ++ + P PA L +++++HPVAAAFH FK LAI Y+ GGF S++FVFI V+C+LLLAFDFWTVKNV+GRLLVGLRWWN + +DGSN+WVFES+E+ EI P DA++FWT LY P+ W++F LVA+LK +V+W +I VAL LSGAN+VGY KCS D K K+ +++ A + L +SA SF+S S GG+ P
Sbjct: 7 QLEFIDVPAEPQDSPVTSPRSRTTTASSSVENSPRATPATAGLLSGVTESVRKAKHPVAAAFHLFFKFLAIGVYILGGFVSNSFVFIFVICVLLLAFDFWTVKNVSGRLLVGLRWWNRINEDGSNDWVFESLEDMSEIDPLDAKIFWTALYGAPVAWALFLLVAVLKLNVEWALIAIVALTLSGANVVGYTKCSKDAKSKMHSMMTAGALE---ALNSSAGASFLSTISNLAFSNAAGGSGRSSRQP 250
BLAST of EWM29078.1 vs. NCBI_GenBank
Match: gi|698821755|ref|XP_009843906.1| (hypothetical protein H257_16978 [Aphanomyces astaci] >gi|698821757|ref|XP_009843907.1| hypothetical protein, variant [Aphanomyces astaci] >gi|574100965|gb|ETV66535.1| hypothetical protein H257_16978 [Aphanomyces astaci] >gi|574100966|gb|ETV66536.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 232.261 bits (591), Expect = 7.067e-73 Identity = 116/246 (47.15%), Postives = 161/246 (65.45%), Query Frame = 0
Query: 11 ELQFIRVP-ETSVSNQASGQTPYAPMGAAPASGPPPPPAGDAL-----AFIKQSRHPVAAAFHFVFKALAIFFYLFGGFFSSNFVFICVVCILLLAFDFWTVKNVTGRLLVGLRWWNNVRDDGSNEWVFESVENPGEIHPADARLFWTGLYVTPIVWSVFFLVALLKFSVQWLVIVFVALVLSGANIVGYYKCSNDQKKKVQNVVQGAAFKTAFGLGTSAVQSFISS-TFGQQQQGGGNAEGPHGP 249
+L+FI V E S S ++ A ++ + P PA L +++++HPVAA+FH +FK LA+ Y+ GGF S++FVFI V+C+LLLAFDFWTVKNV+GRLLVGLRWWN + +DGSNEWVFES+E+ EI P DA++FWT LY P VW++F LVA+LKF+V+W +I VAL LSGAN+VGY KCS D K K+ +++ A + +++ S I++ F G G + P
Sbjct: 7 KLEFIDVSAEPHDSPVTSPRSRAATASSSVENSPRAVPASAGLLSGVTESVRKAKHPVAASFHLLFKLLALGVYILGGFVSNSFVFIFVICVLLLAFDFWTVKNVSGRLLVGLRWWNRINEDGSNEWVFESLEDMSEIDPLDAKIFWTALYGAPGVWTLFLLVAVLKFNVEWALIAIVALTLSGANVVGYTKCSKDAKSKMHSMMTTGALEALHSSAGASILSTITNLAFSNAANGSGRSSSRQQP 252
BLAST of EWM29078.1 vs. NCBI_GenBank
Match: gi|301089432|ref|XP_002895017.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262103999|gb|EEY62051.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 223.016 bits (567), Expect = 8.678e-70 Identity = 110/198 (55.56%), Postives = 139/198 (70.20%), Query Frame = 0
Query: 55 IKQSRHPVAAAFHFVFKALAIFFYLFGGFFSSNFVFICVVCILLLAFDFWTVKNVTGRLLVGLRWWNNVRDDGSNEWVFESVENPGEIHPADARLFWTGLYVTPIVWSVFFLVALLKFSVQWLVIVFVALVLSGANIVGYYKCSNDQKKKVQNVVQGAAFKTAFGLGTSAVQSFISSTFGQQQQGGGNAEGPHGPPSH 252
+ ++HPVAA FH FK LA+ YLFG F+S+FVFI VVCILLLAFDFW VKNVTGRLLVGLRWWN V +DG++EWVFES E+ EI P D+R+FWTGLY P +W + +VALLKF+V+W +IV VA+ LSGANI+GY +C D K+K+Q+++ A AFG S+ S I ST G G +E P+
Sbjct: 26 VTSAKHPVAAFFHLFFKGLALLLYLFGSIFTSDFVFIFVVCILLLAFDFWAVKNVTGRLLVGLRWWNKVNEDGTSEWVFESHEDMTEIDPLDSRVFWTGLYGAPALWVMLLIVALLKFNVEWALIVVVAVALSGANIIGYTRCKKDAKQKMQSLMSQGALG-AFG---SSAGSSIMSTIGGLALGRDLSELAAKKPTK 219
BLAST of EWM29078.1 vs. NCBI_GenBank
Match: gi|675186079|ref|XP_008901924.1| (hypothetical protein PPTG_08928 [Phytophthora parasitica INRA-310] >gi|566029272|gb|ETI52183.1| hypothetical protein F443_04632 [Phytophthora parasitica P1569] >gi|567966866|gb|ETK92057.1| hypothetical protein L915_04508 [Phytophthora parasitica] >gi|568024591|gb|ETL98621.1| hypothetical protein L917_04351 [Phytophthora parasitica] >gi|568098181|gb|ETN12916.1| hypothetical protein PPTG_08928 [Phytophthora parasitica INRA-310] >gi|570332997|gb|ETO80945.1| hypothetical protein F444_04667 [Phytophthora parasitica P1976]) HSP 1 Score: 223.402 bits (568), Expect = 1.731e-69 Identity = 113/216 (52.31%), Postives = 150/216 (69.44%), Query Frame = 0
Query: 1 MMEGHAQGDDELQFIRV-PETSVSN--QASGQTPYAPMGAAPASGPPPPPAGDALAFIKQSRHPVAAAFHFVFKALAIFFYLFGGFFSSNFVFICVVCILLLAFDFWTVKNVTGRLLVGLRWWNNVRDDGSNEWVFESVENPGEIHPADARLFWTGLYVTPIVWSVFFLVALLKFSVQWLVIVFVALVLSGANIVGYYKCSNDQKKKVQNVV-QGA 212
MM + +EL+FI V PET +N ++ ++ A A+P + + ++HPVAA FH FK LA+ YLFG F SNFVFI VVCILLLAFDFWTVKNVTGRLLVGLRWWN + +DG++EWVFES E+ EI P D+R+FWTGLY P +W + ++A+LKF+V+W +IV VA+ LSGANI+GY +C D K+K+Q+++ QGA
Sbjct: 1 MMAEDKKPQEELEFISVEPETQPTNVPASTERSTNAKAAASPKASDKEALLTSMRKVVTSAKHPVAAFFHLFFKGLALLLYLFGSIFISNFVFIFVVCILLLAFDFWTVKNVTGRLLVGLRWWNKINEDGTSEWVFESHEDMTEIDPLDSRVFWTGLYGAPALWVMLLIIAVLKFNVEWALIVVVAVALSGANIIGYTRCKKDAKQKMQSLMSQGA 216
BLAST of EWM29078.1 vs. NCBI_GenBank
Match: gi|570992391|gb|ETP49903.1| (hypothetical protein F442_04681 [Phytophthora parasitica P10297]) HSP 1 Score: 223.402 bits (568), Expect = 2.199e-69 Identity = 113/216 (52.31%), Postives = 150/216 (69.44%), Query Frame = 0
Query: 1 MMEGHAQGDDELQFIRV-PETSVSN--QASGQTPYAPMGAAPASGPPPPPAGDALAFIKQSRHPVAAAFHFVFKALAIFFYLFGGFFSSNFVFICVVCILLLAFDFWTVKNVTGRLLVGLRWWNNVRDDGSNEWVFESVENPGEIHPADARLFWTGLYVTPIVWSVFFLVALLKFSVQWLVIVFVALVLSGANIVGYYKCSNDQKKKVQNVV-QGA 212
MM + +EL+FI V PET +N ++ ++ A A+P + + ++HPVAA FH FK LA+ YLFG F SNFVFI VVCILLLAFDFWTVKNVTGRLLVGLRWWN + +DG++EWVFES E+ EI P D+R+FWTGLY P +W + ++A+LKF+V+W +IV VA+ LSGANI+GY +C D K+K+Q+++ QGA
Sbjct: 1 MMAEDKKPQEELEFISVEPETQPTNVPASTERSTNAKAAASPKASDKEALLTSMRKVVTSAKHPVAAFFHLFFKGLALLLYLFGSIFISNFVFIFVVCILLLAFDFWTVKNVTGRLLVGLRWWNKINEDGTSEWVFESHEDMTEIDPLDSRVFWTGLYGAPALWVMLLIIAVLKFNVEWALIVVVAVALSGANIIGYTRCKKDAKQKMQSLMSQGA 216 The following BLAST results are available for this feature:
BLAST of EWM29078.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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