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Properties
| Property Name | Value |
|---|
| Product | aureochrome1-like protein |
| Orig transcript id | gnl|cribi|Naga_100007g32.6496.mrna |
| Orig protein id | gnl|cribi|Naga_100007g32.6496 |
| Gene | AUR2 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:886278..888731 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1538 ID=rna1538|Name=rna1538|organism=Nannochloropsis gaditana|type=mRNA|length=1046bp
AATCACACGAATATTGTAGCAGAAAAAGAATGGTGGAGTCTTGATCTGGG
ATACTTTCAATTGTGCTCGAGACATAATTTTCATGCCTGCGTCGGAAGCA
TGAGGTGGCGAGTTGTTGAGATAATATAAGTCGTCCGCTGGAATACACGC
TAGGGAGTCTCCGGTTCTTGCCCTGCCCTTTCCAACCCAAACAACTTATA
CCATGTGAAACCACTCTAATAATGTGATTATTTTACAATTTTCACAGACA
CTGCGCCACGATGGTCTTAACACAAAAAAATGTTGCCCTCGCCTTGATGG
CAATCTGCCTCCTAGGAGCCGCGATGACTCAAGCCTTCGTCGTTCCAGCC
CCAGGTCGAGCGCTCAGCTTGCATACAAGGTCGTCCACATCTCAGCATAA
GAGATCACAGCAGTATAATTTCATGCATCTTTTGAGTGGTACCTCTTCAT
GTAAACGCAAGCGCGATCTCATAAAGATGGAAGTCGATCCCGCTGTCATC
GGGGGCGTGATCGCAGGTGTGGTGGGAGTTAGTCTGGGAGTGGGCGCGAT
GATTTTCACGGAGAAGCAAACACTGCGGCGTGAAGAGCGAAAGGCGGCCG
ATAAAGAAAAGGCTGCAAGGGCACAACGGGCAGCGGCAGCTGCCGCCGCC
TCGACAGCCGCACAATCATCTGAAGGAGGCTCGCAAGGAGGGGATGGAGG
GATTGCAGAGGATGAGGACGGTTGGTAAAGCACTGGTTGATGAGAAGCTG
AAGAATTGGTCTTTTACAGTTGTTAAGTGGAGACAAAAGGATATGAAACC
TACGAGGGGAGGTTGAGAAAGGGGATGTTGACGCCCAGGGAGGCGATAAA
CCTGTGCTCGGCTGGTCAGTGTTTATTTGATTGCGTAGCCACTTGCGCCC
TCAACGCAGGGGGACAAGACTGTGATGTACGACGTGCGAAGCAAATCGAA
AGGAATAACAAGCGCTTTAGGGCGACAAATCGAAAGTGACGCTTCAGAGG
GGGTCTGCGAGGAGGACGGCTGAAAGAAATGCATTCTTGGGTTTCC back to topprotein sequence of rna1538 >rna1538-protein ID=rna1538-protein|Name=rna1538|organism=Nannochloropsis gaditana|type=polypeptide|length=360bp
MAAIMLQQPQCKVPTSLLPVYSRAQGGQSGDLDLNMEQLLEAYVLDEGMD
LDFLDGTNISDTSKDTAPNNISDLDDLDEMADGVGIDSEGDIVKTGGKSK
KRKTSGWSGSGSSIPRKKSHEQMERRRERNRILARRTRLRKKFIFESLQK
QVMDLKRQNSRLKSIVKDKMADQASEVLGACTMRLPSIVTESMAEASTVL
DRGDFNLIKALQTTQQSFVVTDPSLPDNPIVFASQGFLEMTGYSMSQVLG
RNCRFLQGPRTDQATVAQIRKGIAEGADTSVALLNYKVDGTPFWNQFFVA
PLRDLNGEVVYFVGAQSKIDRPLEEIEKDAAERARQEAEERNVAGLASGE
GEEEEDEEED back to topmRNA from alignment at CM002457.1:886278..888731- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1538 ID=rna1538|Name=rna1538|organism=Nannochloropsis gaditana|type=mRNA|length=2454bp|location=Sequence derived from alignment at CM002457.1:886278..888731- (Nannochloropsis gaditana)
CTTGAGGTTGCCCGGGGCGACAGCGAAATTCTGGGAGGGGCCCTGGATGA
CAACGGGCGCGTGGGCTGCGGGTGCATGTCATTGGACGCGAAGGAGGGAG
TACATGAAAGGCCTTCCCCCGCACCAGGTGGAATAGTCTCTTTGCTGTGC
GGGCATTCCCAAGCCCTGGAGACGCCACATGGTGGTGGGGCGGGGGGAGA
TACTTCAAGCGTGAACTACCTTGTCGCATTCGCATTTCGCAGTACGCCGG
AGGATGTCTTTATCTTGACTTCATTGTTACAAGCCACGTATGGCTTCAGG
AAGCCTACATAAATCCTTGTATTTCACGTGTCGCATCGCAAGGTTTAGCT
TTTCCCCTCACTCCCCCCATGTGCCCGGCTTTGAAAACAGGCTTGACCGG
CTTCAAGTAGATACATCAGTTTTTATCGCATATTATGGCTGCGATAATGC
TGCAACAGCCCCAGTGTAAGGTGCCTACTTCCCTCCTTCCCGTATACAGC
CGAGCTCAGGGGGGACAATCTGGAGACTTGGTACGTGGATTTTCAAGTCG
AGTTCACATAGCGAAAACAAAAAGCGCCCCGCTCCACATGCTCACGACGT
GTTTCGCAAGTGGACAGGAGATATGTCACTTGCTTAGCTGCATGAGTTGT
GTGGGCATGATTTTCATGTGACCTCAAATTATTCTCTCCTCCTGGCGCAG
GACCTCAACATGGAGCAGCTCTTGGAGGCGTACGTGCTGGACGAGGGGAT
GGATTTGGACTTTTTGGACGGAACAAATATCTCCGATACCAGCAAAGATA
CTGCGCCCAATAATATCAGTGATGTGAGTCTGATTGATTCTTTGATGTGG
GAGAGTGAAGAGGCGCCGTGACGAATTGAGGCAGCGGGAGATATTTTTTG
GGGGGGTTACTCGCTTTCATTCATGGGACAGCCCCTTCTCCATCGCTTGA
CTGCGTTTGAAGAGGAATGATTTTATTTTAAAGTAATCCCGCTCATTTTT
CCTGGCTCTATTTTCCCTTGTCCGCAAGTTGGACGACCTTGATGAGATGG
CAGATGGAGTCGGCATTGACTCGGAGGGGGACATCGTCAAGACCGGAGGC
AAAAGTAAAAAGCGCAAAACATCAGGGTGGAGCGGTAGTGGAAGTAGCAT
CCCGCGGAAGAAAAGCCACGAACAGATGGAGCGTAGAAGAGAGCGCAATC
GGATTCTCGCCCGACGCACGCGCCTGCGGAAGAAGTTTATTTTTGAGTCC
TTGCAGAAGCAAGTGATGGACCTGAAGCGACAAAATTCTCGGCTCAAGAG
CATCGTAAAGGACAAAATGGCCGATCAAGCTAGCGAAGTGCTGGGCGCAT
GCACGATGCGGCTGCCCTCGATTGTCACCGAGTCTATGGCCGAGGCCTCG
ACCGTGCTAGACCGCGGCGACTTTAACCTGATCAAGGCACTGCAAACCAC
TCAGCAGTCCTTTGTCGTCACGGACCCCTCCCTCCCTGATAACCGTAAGT
AGAAGGTGGAGCGGAGACACGCTGTCATCTATACAGCATCTTGGGGAGCT
GCTTGTGTTTTATTGATCGGTCTGGCTTTTCCTGCTCACTTATTATGTCC
TTTTTTCCCCCGCCTCGCCGCCCCCCCCCTTCACTCCCTCTTGCATTCCC
CAGCCATCGTCTTCGCCTCGCAGGGCTTTTTGGAAATGACGGGCTACAGT
ATGTCCCAGGTCTTAGGCCGCAACTGCCGGTTTTTGCAGGGGCCGCGCAC
GGACCAGGCCACGGTGGCACAGATCCGGAAGGGCATCGCCGAAGGCGCGG
ACACCAGTGTGGCGCTCCTGAACTATAAGGTGGACGGTACGCCTTTTTGG
AACCAGTTCTTCGTCGCCCCTCTCAGAGACCTGAACGGGGAGGTGGTGTA
CTTCGTGGGCGCCCAGAGTAAGATCGACCGGCCCCTGGAGGAGATCGAGA
AAGACGCGGCTGAAAGGGCGAGGCAGGAAGCAGAGGAGAGGAATGTTGCC
GGACTGGCGAGCGGGGAGGGCGAAGAGGAGGAAGACGAGGAGGAGGATTG
AAAGGAGGGGACGGATCGGGCCAGAGAGACTTTGCCCGAGACATGTAAAG
GATGGGGAGGGAGAACGGAGGGGAGAAGGCCTGAGGAGCGGGGCTAAAGG
GGCGGGGAGGGAGGAAGCACGTGCCTAGAGGAGGCTCTCCCGGCCTTCGT
GCAGGGGCACGTTCAGCGGATGACGGCTACGCGGCGAGTTGGAGGGGCGT
ATTGTACACGACTTGATTTGAAATGGTATGGGATTGTGACATGGAAGAAC
ATTCAGGGAGAAGACCGGGAGGGAGGAACGAAGCCGCAGCGATTACAAAG
GCAAGAGGAAACCCAAGAATGCATTTCTTTCAGCCGTCCTCCTCGCAGAC
CCCCTCTGAAGCGTCACTTTCGATTTGTCGCCCTAAAGCGCTTGTTATTC
CTTT back to topCoding sequence (CDS) from alignment at CM002457.1:886278..888731- >rna1538 ID=rna1538|Name=rna1538|organism=Nannochloropsis gaditana|type=CDS|length=4332bp|location=Sequence derived from alignment at CM002457.1:886278..888731- (Nannochloropsis gaditana)
CCATCGTCTTCGCCTCGCAGGGCTTTTTGGAAATGACGGGCTACAGTATG
TCCCAGGTCTTAGGCCGCAACTGCCGGTTTTTGCAGGGGCCGCGCACGGA
CCAGGCCACGGTGGCACAGATCCGGAAGGGCATCGCCGAAGGCGCGGACA
CCAGTGTGGCGCTCCTGAACTATAAGGTGGACGGTACGCCTTTTTGGAAC
CAGTTCTTCGTCGCCCCTCTCAGAGACCTGAACGGGGAGGTGGTGTACTT
CGTGGGCGCCCAGAGTAAGATCGACCGGCCCCTGGAGGAGATCGAGAAAG
ACGCGGCTGAAAGGGCGAGGCAGGAAGCAGAGGAGAGGAATGTTGCCGGA
CTGGCGAGCGGGGAGGGCGAAGAGGAGGAAGACGAGGAGGAGGATTGATT
GGACGACCTTGATGAGATGGCAGATGGAGTCGGCATTGACTCGGAGGGGG
ACATCGTCAAGACCGGAGGCAAAAGTAAAAAGCGCAAAACATCAGGGTGG
AGCGGTAGTGGAAGTAGCATCCCGCGGAAGAAAAGCCACGAACAGATGGA
GCGTAGAAGAGAGCGCAATCGGATTCTCGCCCGACGCACGCGCCTGCGGA
AGAAGTTTATTTTTGAGTCCTTGCAGAAGCAAGTGATGGACCTGAAGCGA
CAAAATTCTCGGCTCAAGAGCATCGTAAAGGACAAAATGGCCGATCAAGC
TAGCGAAGTGCTGGGCGCATGCACGATGCGGCTGCCCTCGATTGTCACCG
AGTCTATGGCCGAGGCCTCGACCGTGCTAGACCGCGGCGACTTTAACCTG
ATCAAGGCACTGCAAACCACTCAGCAGTCCTTTGTCGTCACGGACCCCTC
CCTCCCTGATAACCGACCTCAACATGGAGCAGCTCTTGGAGGCGTACGTG
CTGGACGAGGGGATGGATTTGGACTTTTTGGACGGAACAAATATCTCCGA
TACCAGCAAAGATACTGCGCCCAATAATATCAGTGATATGGCTGCGATAA
TGCTGCAACAGCCCCAGTGTAAGGTGCCTACTTCCCTCCTTCCCGTATAC
AGCCGAGCTCAGGGGGGACAATCTGGAGACTTGCCATCGTCTTCGCCTCG
CAGGGCTTTTTGGAAATGACGGGCTACAGTATGTCCCAGGTCTTAGGCCG
CAACTGCCGGTTTTTGCAGGGGCCGCGCACGGACCAGGCCACGGTGGCAC
AGATCCGGAAGGGCATCGCCGAAGGCGCGGACACCAGTGTGGCGCTCCTG
AACTATAAGGTGGACGGTACGCCTTTTTGGAACCAGTTCTTCGTCGCCCC
TCTCAGAGACCTGAACGGGGAGGTGGTGTACTTCGTGGGCGCCCAGAGTA
AGATCGACCGGCCCCTGGAGGAGATCGAGAAAGACGCGGCTGAAAGGGCG
AGGCAGGAAGCAGAGGAGAGGAATGTTGCCGGACTGGCGAGCGGGGAGGG
CGAAGAGGAGGAAGACGAGGAGGAGGATTGATTGGACGACCTTGATGAGA
TGGCAGATGGAGTCGGCATTGACTCGGAGGGGGACATCGTCAAGACCGGA
GGCAAAAGTAAAAAGCGCAAAACATCAGGGTGGAGCGGTAGTGGAAGTAG
CATCCCGCGGAAGAAAAGCCACGAACAGATGGAGCGTAGAAGAGAGCGCA
ATCGGATTCTCGCCCGACGCACGCGCCTGCGGAAGAAGTTTATTTTTGAG
TCCTTGCAGAAGCAAGTGATGGACCTGAAGCGACAAAATTCTCGGCTCAA
GAGCATCGTAAAGGACAAAATGGCCGATCAAGCTAGCGAAGTGCTGGGCG
CATGCACGATGCGGCTGCCCTCGATTGTCACCGAGTCTATGGCCGAGGCC
TCGACCGTGCTAGACCGCGGCGACTTTAACCTGATCAAGGCACTGCAAAC
CACTCAGCAGTCCTTTGTCGTCACGGACCCCTCCCTCCCTGATAACCGAC
CTCAACATGGAGCAGCTCTTGGAGGCGTACGTGCTGGACGAGGGGATGGA
TTTGGACTTTTTGGACGGAACAAATATCTCCGATACCAGCAAAGATACTG
CGCCCAATAATATCAGTGATATGGCTGCGATAATGCTGCAACAGCCCCAG
TGTAAGGTGCCTACTTCCCTCCTTCCCGTATACAGCCGAGCTCAGGGGGG
ACAATCTGGAGACTTGCCATCGTCTTCGCCTCGCAGGGCTTTTTGGAAAT
GACGGGCTACAGTATGTCCCAGGTCTTAGGCCGCAACTGCCGGTTTTTGC
AGGGGCCGCGCACGGACCAGGCCACGGTGGCACAGATCCGGAAGGGCATC
GCCGAAGGCGCGGACACCAGTGTGGCGCTCCTGAACTATAAGGTGGACGG
TACGCCTTTTTGGAACCAGTTCTTCGTCGCCCCTCTCAGAGACCTGAACG
GGGAGGTGGTGTACTTCGTGGGCGCCCAGAGTAAGATCGACCGGCCCCTG
GAGGAGATCGAGAAAGACGCGGCTGAAAGGGCGAGGCAGGAAGCAGAGGA
GAGGAATGTTGCCGGACTGGCGAGCGGGGAGGGCGAAGAGGAGGAAGACG
AGGAGGAGGATTGATTGGACGACCTTGATGAGATGGCAGATGGAGTCGGC
ATTGACTCGGAGGGGGACATCGTCAAGACCGGAGGCAAAAGTAAAAAGCG
CAAAACATCAGGGTGGAGCGGTAGTGGAAGTAGCATCCCGCGGAAGAAAA
GCCACGAACAGATGGAGCGTAGAAGAGAGCGCAATCGGATTCTCGCCCGA
CGCACGCGCCTGCGGAAGAAGTTTATTTTTGAGTCCTTGCAGAAGCAAGT
GATGGACCTGAAGCGACAAAATTCTCGGCTCAAGAGCATCGTAAAGGACA
AAATGGCCGATCAAGCTAGCGAAGTGCTGGGCGCATGCACGATGCGGCTG
CCCTCGATTGTCACCGAGTCTATGGCCGAGGCCTCGACCGTGCTAGACCG
CGGCGACTTTAACCTGATCAAGGCACTGCAAACCACTCAGCAGTCCTTTG
TCGTCACGGACCCCTCCCTCCCTGATAACCGACCTCAACATGGAGCAGCT
CTTGGAGGCGTACGTGCTGGACGAGGGGATGGATTTGGACTTTTTGGACG
GAACAAATATCTCCGATACCAGCAAAGATACTGCGCCCAATAATATCAGT
GATATGGCTGCGATAATGCTGCAACAGCCCCAGTGTAAGGTGCCTACTTC
CCTCCTTCCCGTATACAGCCGAGCTCAGGGGGGACAATCTGGAGACTTGC
CATCGTCTTCGCCTCGCAGGGCTTTTTGGAAATGACGGGCTACAGTATGT
CCCAGGTCTTAGGCCGCAACTGCCGGTTTTTGCAGGGGCCGCGCACGGAC
CAGGCCACGGTGGCACAGATCCGGAAGGGCATCGCCGAAGGCGCGGACAC
CAGTGTGGCGCTCCTGAACTATAAGGTGGACGGTACGCCTTTTTGGAACC
AGTTCTTCGTCGCCCCTCTCAGAGACCTGAACGGGGAGGTGGTGTACTTC
GTGGGCGCCCAGAGTAAGATCGACCGGCCCCTGGAGGAGATCGAGAAAGA
CGCGGCTGAAAGGGCGAGGCAGGAAGCAGAGGAGAGGAATGTTGCCGGAC
TGGCGAGCGGGGAGGGCGAAGAGGAGGAAGACGAGGAGGAGGATTGATTG
GACGACCTTGATGAGATGGCAGATGGAGTCGGCATTGACTCGGAGGGGGA
CATCGTCAAGACCGGAGGCAAAAGTAAAAAGCGCAAAACATCAGGGTGGA
GCGGTAGTGGAAGTAGCATCCCGCGGAAGAAAAGCCACGAACAGATGGAG
CGTAGAAGAGAGCGCAATCGGATTCTCGCCCGACGCACGCGCCTGCGGAA
GAAGTTTATTTTTGAGTCCTTGCAGAAGCAAGTGATGGACCTGAAGCGAC
AAAATTCTCGGCTCAAGAGCATCGTAAAGGACAAAATGGCCGATCAAGCT
AGCGAAGTGCTGGGCGCATGCACGATGCGGCTGCCCTCGATTGTCACCGA
GTCTATGGCCGAGGCCTCGACCGTGCTAGACCGCGGCGACTTTAACCTGA
TCAAGGCACTGCAAACCACTCAGCAGTCCTTTGTCGTCACGGACCCCTCC
CTCCCTGATAACCGACCTCAACATGGAGCAGCTCTTGGAGGCGTACGTGC
TGGACGAGGGGATGGATTTGGACTTTTTGGACGGAACAAATATCTCCGAT
ACCAGCAAAGATACTGCGCCCAATAATATCAGTGATATGGCTGCGATAAT
GCTGCAACAGCCCCAGTGTAAGGTGCCTACTTCCCTCCTTCCCGTATACA
GCCGAGCTCAGGGGGGACAATCTGGAGACTTG back to top
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