EWM29169.1, cds1535 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29169.1 vs. NCBI_GenBank
Match: gi|585111689|gb|EWM29169.1| (aureochrome1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 737.258 bits (1902), Expect = 0.000e+0 Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0
Query: 1 MAAIMLQQPQCKVPTSLLPVYSRAQGGQSGDLDLNMEQLLEAYVLDEGMDLDFLDGTNISDTSKDTAPNNISDLDDLDEMADGVGIDSEGDIVKTGGKSKKRKTSGWSGSGSSIPRKKSHEQMERRRERNRILARRTRLRKKFIFESLQKQVMDLKRQNSRLKSIVKDKMADQASEVLGACTMRLPSIVTESMAEASTVLDRGDFNLIKALQTTQQSFVVTDPSLPDNPIVFASQGFLEMTGYSMSQVLGRNCRFLQGPRTDQATVAQIRKGIAEGADTSVALLNYKVDGTPFWNQFFVAPLRDLNGEVVYFVGAQSKIDRPLEEIEKDAAERARQEAEERNVAGLASGEGEEEEDEEED 360
MAAIMLQQPQCKVPTSLLPVYSRAQGGQSGDLDLNMEQLLEAYVLDEGMDLDFLDGTNISDTSKDTAPNNISDLDDLDEMADGVGIDSEGDIVKTGGKSKKRKTSGWSGSGSSIPRKKSHEQMERRRERNRILARRTRLRKKFIFESLQKQVMDLKRQNSRLKSIVKDKMADQASEVLGACTMRLPSIVTESMAEASTVLDRGDFNLIKALQTTQQSFVVTDPSLPDNPIVFASQGFLEMTGYSMSQVLGRNCRFLQGPRTDQATVAQIRKGIAEGADTSVALLNYKVDGTPFWNQFFVAPLRDLNGEVVYFVGAQSKIDRPLEEIEKDAAERARQEAEERNVAGLASGEGEEEEDEEED
Sbjct: 1 MAAIMLQQPQCKVPTSLLPVYSRAQGGQSGDLDLNMEQLLEAYVLDEGMDLDFLDGTNISDTSKDTAPNNISDLDDLDEMADGVGIDSEGDIVKTGGKSKKRKTSGWSGSGSSIPRKKSHEQMERRRERNRILARRTRLRKKFIFESLQKQVMDLKRQNSRLKSIVKDKMADQASEVLGACTMRLPSIVTESMAEASTVLDRGDFNLIKALQTTQQSFVVTDPSLPDNPIVFASQGFLEMTGYSMSQVLGRNCRFLQGPRTDQATVAQIRKGIAEGADTSVALLNYKVDGTPFWNQFFVAPLRDLNGEVVYFVGAQSKIDRPLEEIEKDAAERARQEAEERNVAGLASGEGEEEEDEEED 360
BLAST of EWM29169.1 vs. NCBI_GenBank
Match: gi|1001011757|gb|AML76382.1| (putative LOV domain-containing protein [Punctaria latifolia]) HSP 1 Score: 258.455 bits (659), Expect = 3.125e-79 Identity = 130/265 (49.06%), Postives = 173/265 (65.28%), Query Frame = 0
Query: 96 GGKSKKRKTSGWSGSGSSIPRKKSHEQMERRRERNRILARRTRLRKKFIFESLQKQVMDLKRQNSRLKSIVKDKMADQASEVLGACTMRLPSIVTESMAEASTVLDRGDFNLIKALQTTQQSFVVTDPSLPDNPIVFASQGFLEMTGYSMSQVLGRNCRFLQGPRTDQATVAQIRKGIAEGADTSVALLNYKVDGTPFWNQFFVAPLRDLNGEVVYFVGAQSKIDRPLEEIEKDAAERARQEAEERNVAGLASGEGEEEEDEEED 360
GG +++R +S EQ ++RRERNR+LARRTRLRKKF F+SLQ+QV L+R+N RLKSIV + A ++ +C ++PS+V +S +A+ VLD+ F L+KALQ++Q SF VTDP +PDNPIV+AS F+E+TGYS +QVLGRNCRFLQGP TD VA+IRKGI EG+DTSV L YK DGT FWN FVA LR+ +++ +VG Q +D+ E VA + +GE +E E +ED
Sbjct: 165 GGVTRRRSSS-------------KEEQAKKRRERNRVLARRTRLRKKFFFQSLQQQVARLQRENERLKSIVSTRCPGSAGDIFLSCASKMPSMVADSAGQATAVLDQSGFLLVKALQSSQPSFCVTDPQMPDNPIVYASDSFIELTGYSRAQVLGRNCRFLQGPDTDPDAVAKIRKGIEEGSDTSVYLRQYKADGTVFWNHVFVAALRNSEDKIINYVGIQHPLDK---------------EPSPEVVACINNGEEQEHESAQED 401
BLAST of EWM29169.1 vs. NCBI_GenBank
Match: gi|1001016320|gb|AML78436.1| (putative LOV domain-containing protein [Saccharina sculpera]) HSP 1 Score: 256.529 bits (654), Expect = 9.942e-79 Identity = 126/238 (52.94%), Postives = 166/238 (69.75%), Query Frame = 0
Query: 93 VKTGGKSKKRKTSGWSGSGSSIPRKKS---HEQMERRRERNRILARRTRLRKKFIFESLQKQVMDLKRQNSRLKSIVKDKMADQASEVLGACTMRLPSIVTESMAEASTVLDRGDFNLIKALQTTQQSFVVTDPSLPDNPIVFASQGFLEMTGYSMSQVLGRNCRFLQGPRTDQATVAQIRKGIAEGADTSVALLNYKVDGTPFWNQFFVAPLRDLNGEVVYFVGAQSKIDR-PLEEI 326
V+ G + RKT+ + R++S EQ ++RRERNR+LARRTRLRKKF F+SLQ+QV L+R+N RLK IV + D E+L +C R+PS+V + +A+ +LD+ F L+KALQ++Q SF VTDP +PDNPIV+AS+ F+E+TGY SQVLGRNCRFLQGP TD VA+IRKGI EG DTSV L YK DGT FWN FVA LR+ +++ +VG Q +D+ P E+
Sbjct: 135 VEGGAGATFRKTAA-----GGVTRRRSSSKEEQAKKRRERNRVLARRTRLRKKFFFQSLQQQVAGLQRENERLKGIVTSRCPDTVGEILLSCASRVPSVVADCAGQATALLDQSGFLLVKALQSSQPSFCVTDPQMPDNPIVYASESFIELTGYERSQVLGRNCRFLQGPDTDPDAVAKIRKGIEEGTDTSVHLRQYKADGTVFWNHVFVAALRNSERKIINYVGIQHPLDKEPSPEV 367
BLAST of EWM29169.1 vs. NCBI_GenBank
Match: gi|1001017294|gb|AML78877.1| (putative LOV domain-containing protein [Scytosiphon dotyi]) HSP 1 Score: 251.136 bits (640), Expect = 5.505e-78 Identity = 133/267 (49.81%), Postives = 176/267 (65.92%), Query Frame = 0
Query: 97 GKSKKRKTSGWSGSGSSIPRKKS--HEQMERRRERNRILARRTRLRKKFIFESLQKQVMDLKRQNSRLKSIVKDKMADQASEVLGAC-TMRLPSIVTESMAEASTVLDRGDFNLIKALQTTQQSFVVTDPSLPDNPIVFASQGFLEMTGYSMSQVLGRNCRFLQGPRTDQATVAQIRKGIAEGADTSVALLNYKVDGTPFWNQFFVAPLRDLNGEVVYFVGAQSKIDRPLEEIEKDAAERARQEAEERNVAGLASGEGEEEEDEEED 360
G++ RKT+ SG R+ S EQ ++RRERNR+LARRTRLRKKF F+SLQ+QV L+R+N RLK+IV + A E+L +C + + PS+V + +A+ +LD+ F L+KALQ++Q SF VTDP +PDNPIV+AS F+E+TGY SQVLGRNCRFLQGP TD VA+IRKGI EG+DTSV L YK DGT FWN FVA LR+ +++ +VG Q +D+ E + VA + +GE E +EED
Sbjct: 36 GRTTLRKTA----SGGVTRRRASSKEEQAKKRRERNRVLARRTRLRKKFFFQSLQQQVARLQRENERLKNIVTSRCPGSAGEILVSCASSKTPSMVADCARQATALLDQSGFLLVKALQSSQPSFCVTDPQMPDNPIVYASDSFIELTGYDRSQVLGRNCRFLQGPDTDPDAVAKIRKGIEEGSDTSVYLRQYKADGTVFWNHVFVAALRNSEHKIINYVGIQHPLDK---------------EPSAQVVACINNGEERMESIQEED 283
BLAST of EWM29169.1 vs. NCBI_GenBank
Match: gi|1001014239|gb|AML77495.1| (putative LOV domain-containing protein [Scytosiphon lomentaria]) HSP 1 Score: 252.292 bits (643), Expect = 5.765e-77 Identity = 134/268 (50.00%), Postives = 178/268 (66.42%), Query Frame = 0
Query: 97 GKSKKRKTSGWSGSGSSIPRKKS--HEQMERRRERNRILARRTRLRKKFIFESLQKQVMDLKRQNSRLKSIVKDKMADQASEVLGAC-TMRLPSIVTESMAEASTVLDRGDFNLIKALQTTQQSFVVTDPSLPDNPIVFASQGFLEMTGYSMSQVLGRNCRFLQGPRTDQATVAQIRKGIAEGADTSVALLNYKVDGTPFWNQFFVAPLRDLNGEVVYFVGAQSKIDR-PLEEIEKDAAERARQEAEERNVAGLASGEGEEEEDEEED 360
G++ RKT+ SG R+ S EQ ++RRERNR+LARRTRLRKKF F+SLQ+QV L+R+N RLK+IV + D E+L +C + + PS+VT+ +A+ +LD+ F L+KALQ++Q SF VTDP +PDNPIV+AS F+E+TGY SQVLGRNCRFLQGP TD VA+IRKGI EG+DTSV L YK DGT FWN FVA LR+ +++ +VG Q +D+ P E+ VA + +GE + +EED
Sbjct: 154 GRTTLRKTA----SGGVTRRRASSKEEQAKKRRERNRVLARRTRLRKKFFFQSLQQQVARLQRENERLKNIVTSRCPDSVGEILMSCASSKTPSMVTDCTRQATALLDQSGFLLVKALQSSQPSFCVTDPQMPDNPIVYASDSFIELTGYDRSQVLGRNCRFLQGPDTDPDAVAKIRKGIEEGSDTSVYLRQYKADGTVFWNHVFVAALRNSQHKIINYVGIQHPLDKEPSAEV----------------VACINNGEERMDAIQEED 401
BLAST of EWM29169.1 vs. NCBI_GenBank
Match: gi|242345215|dbj|BAH80321.1| (aureochrome2-like protein [Fucus evanescens]) HSP 1 Score: 251.521 bits (641), Expect = 7.675e-77 Identity = 114/201 (56.72%), Postives = 153/201 (76.12%), Query Frame = 0
Query: 121 EQMERRRERNRILARRTRLRKKFIFESLQKQVMDLKRQNSRLKSIVKDKMADQASEVLGACTMRLPSIVTESMAEASTVLDRGDFNLIKALQTTQQSFVVTDPSLPDNPIVFASQGFLEMTGYSMSQVLGRNCRFLQGPRTDQATVAQIRKGIAEGADTSVALLNYKVDGTPFWNQFFVAPLRDLNGEVVYFVGAQSKIDR 321
EQ ++RRERNR+LARRTRLRKKF F+SLQ+QV DL+ +N RLK I+ + A+ ++E++ +C +PS+V + +A+ +L++ DF L+KALQ++Q SF VTDP LPDNPIV+AS F+E+TGY SQVLGRNCRFLQGP TD VA+IRKGI EG DTSV L YK DGT FWN FVA LR+ + +++ +VG Q +++
Sbjct: 160 EQAKKRRERNRVLARRTRLRKKFFFQSLQQQVNDLQYENERLKGIINTRCANNSAEIIRSCVSHVPSMVADCANQATALLEQSDFLLVKALQSSQPSFCVTDPQLPDNPIVYASNTFIELTGYDRSQVLGRNCRFLQGPDTDPDAVAKIRKGIEEGKDTSVFLRQYKADGTVFWNHVFVAALRNNDHKIINYVGIQHPLEK 360
BLAST of EWM29169.1 vs. NCBI_GenBank
Match: gi|1001017653|gb|AML79041.1| (putative LOV domain-containing protein [Petalonia fascia]) HSP 1 Score: 251.521 bits (641), Expect = 1.328e-76 Identity = 128/243 (52.67%), Postives = 168/243 (69.14%), Query Frame = 0
Query: 88 SEGDIVKTGGKSKKRKTSGWSGSGSSIPRKKS--HEQMERRRERNRILARRTRLRKKFIFESLQKQVMDLKRQNSRLKSIVKDKMADQASEVLGAC-TMRLPSIVTESMAEASTVLDRGDFNLIKALQTTQQSFVVTDPSLPDNPIVFASQGFLEMTGYSMSQVLGRNCRFLQGPRTDQATVAQIRKGIAEGADTSVALLNYKVDGTPFWNQFFVAPLRDLNGEVVYFVGAQSKIDR-PLEEI 326
+ G G++ RKT+ SG R+ S EQ ++RRERNR+LARRTRLRKKF F+SLQ+QV L+R+N RLKSIV + A E+L +C + PS+VT+ +A+ +LD+ F L+KALQ++Q SF VTDP +PDNPIV+AS F+++TGY SQVLGRNCRFLQGP TD VA+IRKGI EG+DTSV L YK DGT FWN FVA LR+ +++ +VG Q +D+ P E+
Sbjct: 146 APGTTTAVAGRTTLRKTA----SGGVTRRRASSKEEQAKKRRERNRVLARRTRLRKKFFFQSLQQQVARLQRENERLKSIVTTRCPGSAGEILVSCASSSTPSMVTDCARQATALLDQSGFLLVKALQSSQPSFCVTDPQMPDNPIVYASDSFIDLTGYDRSQVLGRNCRFLQGPDTDPDAVAKIRKGIEEGSDTSVYLRQYKADGTVFWNHVFVAALRNSEHKIINYVGIQHPLDKEPSAEV 384
BLAST of EWM29169.1 vs. NCBI_GenBank
Match: gi|299115347|emb|CBN74167.1| (aureochrome 2 [Ectocarpus siliculosus]) HSP 1 Score: 251.521 bits (641), Expect = 1.464e-76 Identity = 118/207 (57.00%), Postives = 153/207 (73.91%), Query Frame = 0
Query: 121 EQMERRRERNRILARRTRLRKKFIFESLQKQVMDLKRQNSRLKSIVKDKMADQASEVLGACTMRLPSIVTESMAEASTVLDRGDFNLIKALQTTQQSFVVTDPSLPDNPIVFASQGFLEMTGYSMSQVLGRNCRFLQGPRTDQATVAQIRKGIAEGADTSVALLNYKVDGTPFWNQFFVAPLRDLNGEVVYFVGAQSKIDR-PLEEI 326
EQ ++RRERNR+LARRTRLRKKF F+SLQ+QV L+R+N RLK IV + D E+L +C ++PS+V + +A+ VLD+ F L+KALQ++Q SF VTDP +PDNPIV+AS F+E+TGY +QVLGRNCRFLQGP TD VA+IRKGI EG+DTSV L YK DGT FWN FVA LR+ +++ +VG Q +D+ P E+
Sbjct: 185 EQAKKRRERNRVLARRTRLRKKFFFQSLQQQVARLQRENERLKGIVTTRCPDSVGEILMSCRSKMPSMVADCAGQATAVLDQSGFLLVKALQSSQPSFCVTDPQMPDNPIVYASDTFIELTGYDRAQVLGRNCRFLQGPDTDPDAVAKIRKGIEEGSDTSVYLRQYKADGTVFWNHVFVAALRNSEHKIINYVGIQHPLDKEPSPEV 391
BLAST of EWM29169.1 vs. NCBI_GenBank
Match: gi|1001014775|gb|AML77741.1| (putative LOV domain-containing protein [Sargassum fusiforme]) HSP 1 Score: 249.595 bits (636), Expect = 3.921e-76 Identity = 125/242 (51.65%), Postives = 167/242 (69.01%), Query Frame = 0
Query: 83 GVGIDSEGDIVKTGG-KSKKRKTSGWSGSGSSIPRKKS--HEQMERRRERNRILARRTRLRKKFIFESLQKQVMDLKRQNSRLKSIVKDKMADQASEVLGACTMRLPSIVTESMAEASTVLDRGDFNLIKALQTTQQSFVVTDPSLPDNPIVFASQGFLEMTGYSMSQVLGRNCRFLQGPRTDQATVAQIRKGIAEGADTSVALLNYKVDGTPFWNQFFVAPLRDLNGEVVYFVGAQSKIDR 321
G G V+T G S RKT+ SG R+ S EQ ++RRERNR+LARRTRLRKKF F+SLQ+QV DL+ +N RLK I+ + + + E+L +C+ R+ S+V + ++A+ L + DF L+KALQ++Q SF VTDP LPDNPIV+AS F+++TGY SQVLGRNCRFLQGP TD VA+IRKGI +G DTSV L YK DGT FWN FVA LR+ + +++ +VG Q +++
Sbjct: 117 GTPSSQRGPKVQTSGVGSTVRKTA----SGGVTRRRSSSKEEQAKKRRERNRVLARRTRLRKKFFFQSLQQQVADLQHENERLKGIITTRCPESSDEILRSCSPRVSSVVADCASQATAFLAQNDFLLVKALQSSQPSFCVTDPQLPDNPIVYASDNFIQLTGYERSQVLGRNCRFLQGPDTDPDAVAKIRKGIEQGTDTSVLLRQYKADGTVFWNHVFVAALRNNDHKIINYVGIQHPLEK 354
BLAST of EWM29169.1 vs. NCBI_GenBank
Match: gi|1001018720|gb|AML79527.1| (putative LOV domain-containing protein [Sargassum thunbergii]) HSP 1 Score: 249.21 bits (635), Expect = 4.321e-76 Identity = 125/242 (51.65%), Postives = 167/242 (69.01%), Query Frame = 0
Query: 83 GVGIDSEGDIVKTGG-KSKKRKTSGWSGSGSSIPRKKS--HEQMERRRERNRILARRTRLRKKFIFESLQKQVMDLKRQNSRLKSIVKDKMADQASEVLGACTMRLPSIVTESMAEASTVLDRGDFNLIKALQTTQQSFVVTDPSLPDNPIVFASQGFLEMTGYSMSQVLGRNCRFLQGPRTDQATVAQIRKGIAEGADTSVALLNYKVDGTPFWNQFFVAPLRDLNGEVVYFVGAQSKIDR 321
G G V+T G S RKT+ SG R+ S EQ ++RRERNR+LARRTRLRKKF F+SLQ+QV DL+ +N RLK I+ + + + E+L +C+ R+ S+V + ++A+ L + DF L+KALQ++Q SF VTDP LPDNPIV+AS F+++TGY SQVLGRNCRFLQGP TD VA+IRKGI +G DTSV L YK DGT FWN FVA LR+ + +++ +VG Q +++
Sbjct: 117 GTPSSQRGPKVQTSGVGSTVRKTA----SGGVTRRRSSSKEEQAKKRRERNRVLARRTRLRKKFFFQSLQQQVADLQHENERLKGIITTRCPESSDEILRSCSPRVSSVVADCTSQATAFLAQNDFLLVKALQSSQPSFCVTDPQLPDNPIVYASDNFIQLTGYERSQVLGRNCRFLQGPDTDPDAVAKIRKGIEQGTDTSVLLRQYKADGTVFWNHVFVAALRNNDHKIINYVGIQHPLEK 354 The following BLAST results are available for this feature:
BLAST of EWM29169.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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