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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100007g44.6475.mrna |
| Orig protein id | gnl|cribi|Naga_100007g44.6475 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:869109..871081 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1529 ID=rna1529|Name=rna1529|organism=Nannochloropsis gaditana|type=mRNA|length=2096bp
TAATGGACTCTGCGGGCGATGCACTTGGGTATTCAAGTGGTGCATTCTCA
GTGGACGTGTCAGCCGTTTTTGAAGCATTGGACTTTCTCCAAGCCAACTT
GCCATGTATTGCAGAGGCTTATCTTGCACCGATGAGATGCTCAGACCATT
TCCACCATTATGGCAGGGTCGGCCGGCGTGAAATGTGTCGTGATGACTCA
TCGTATCTCTTTTCCGACAGGAACAACCTCAGCACACTCGCTTTCCTCGT
CTACAACCATGTCTCTTGCTCAAAACAAGTCTTTAAAGGAGCACGATCCT
GTCTTGTACGACCTTATTCAGCAGGAAAAAAATCGTCAGGCTACTTCTTT
GGAGCTGATCGCCTCCGAGAACTTCACCTCCGCGGCTGTCATGGAGTGCC
TGGGCTCCGTTCTGACGAACAAGTACGCCGAGGGTCTGCCCGGCGCCCGC
TACTACGGTGGCAATGAGGTCGTGGATCAAGTGGAGAACTTGTGCCGCGA
CCGGGCCCTCCAAGCCTACCGCCTCGACCCCGAGAAGTGGGGCGTGAACG
TCCAGCCATACTCCGGCAGTCCCGCCAACTTCGCGGTCTACACAGCCCTG
CTACGGCCCCACGATCGTATCATGGGGCTGGATTTGCCCTCGGGGGGACA
CCTGACGCACGGCTTCTACACCTACAACAAAGCCGAGGGCACGCGCAAGG
CCGTGTCCGCTACCAGCATCTACTTCGAGTCCCTCCCTTACCGTGTGCAC
CCCGACACGGGCCTCATCGACTACGACCAGATGGAGGTGAACGCGGCGCT
CTTCAAGCCGGCCATGATCATCTCCGGGGGCTCGGCCTACCCCCGCGAGT
GGGACTACGCACGGATTCGCGCCATCGCGGACGCGAACGGATCCCTGATG
ATGGTCGACATGGCCCACATTTCCGGCCTCGTTGCCGCACAGGAGGCAGC
GAACCCCTTCGAGTACGCAGATGTGGTCACGACCACAACCCATAAGTCCC
TCCGTGGACCCCGTGCCGGCCTGATTTTCTTCCGCAAGGACGACCGCAAC
TTCGAGGGGAGGATCAATCAAGCCGTCTTCCCGGCGCTCCAGGGGGGGCC
GCACGAGCACCAGATCGCCGGTGTAGCCACGCAACTGAAAGAGGTCATGA
CTCCCGAGTTCAAGGAGTACGCGATCCAGGTGAAGAAGAACGCCCAGGCT
ATCGGGAAGGCGCTCATGGCCAAGGGCTACAAGATGGCGACGGGCGGGAC
TGTCAACCACCTGGTTCTCTGGGACCTTCGGCCCCAAGGCCTGACGGGAA
GCAAGATGGAGAAGCTTTGCGATGTCCTGAACATCACATTGAACAAAAAT
GCGGTAGTCGGGGACCGCAGCGCTCTTACACCGGGAGGAGTCCGGATCGG
AGCACCAGCCCTGACGAGCCGCGGGTTTAAGGAGGCGGATTTCGAGCAGG
TGGCTGATTTCTTGGACCGAGCCCTGAAAATTGGCTTGAGAGTGCAGGCG
GCATCGGGGCCCAAGCTGGTTGACTTTGCCAAGGCCGTGGCCGACGACGC
CGAGGTGAAGGCCTTAAAGGCGGAGGTGAACGCTTTCGCAAAGGGGTTTC
CGATGCCCGGCATCGTCTAAGTGCTCGAGCACGCGCGTTTTACCACTTAT
AGAAAGACAGGCGTATTGAGAGATCCTGGCTATGGTGATTGGAGGAAGAA
AAGATGGGAAAGGGGCCGTCGAGGAACGGATACGTGACAGCATTGCCACG
ATTTTCTCCAAGGATAGTAGGTGTAGTCACCCGGACAGTATATGTCTAAG
TTACTGGTACCGAGGAATGGCGGAAACGACGATCTACGAAATCCTGTATC
TCCAACGTTTGGGATGGAAGTAAAAGGGCATGGCAAGAACGTGTACACCA
CGTGTGGAAGAGGGAACATTTCTTAGCCATCGATTGTGTCAAACGGATCC
CTTCTCTTGAGGTCACTTGCATTGCATGCTTAGCATACAGAGCTTCTAAA
TATAAGATGAAGCAAGCTTTGTCGGATGCGTCCTCGAGTTGTTGCGGATT
TTGTCTTTTCTTTGATCTATCTTAATTGTTTGCGCATTAGAGCCGC back to topprotein sequence of rna1529 >rna1529-protein ID=rna1529-protein|Name=rna1529|organism=Nannochloropsis gaditana|type=polypeptide|length=117bp
MRAYFILEILLCMATGKKRERTRDYAELWDQHGKVDLLFFIPRSIMVFVE
QFWTKGASILRTVSCFHFFLSLYGQQMLFRRMYNYTSLPTYLSPSPSSSS
SPLADPAKSITANCSCC back to topmRNA from alignment at CM002457.1:869109..871081+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1529 ID=rna1529|Name=rna1529|organism=Nannochloropsis gaditana|type=mRNA|length=1973bp|location=Sequence derived from alignment at CM002457.1:869109..871081+ (Nannochloropsis gaditana)
GTCAGACGGACGTCTGGGAACTCAACACAACAACATAAAGCCTCACCGTC
TGGAGCCATCGCAATCGCAAGACCAAATACGGGAGTAcgctgggaggaag
aatgaGTGAAAAACGTGTAAGCGAGAGGACGATTTTTTTTCGGTCTTGCT
GTACCTGCTGCGGCCAAGCGCGCATTCGCATTTCTTGTGCTAGGCGATGA
GGGGTGAGCGATTGACATAGAGGACACGTTTGCGTCCGTTTTAttctttt
ggggggggctCAACCGCACAGAATGCTTTTTGTCGTCGTGATCACTCTTC
CACGCAAGCGGTACGGGGAACAGAGCGCAATGCTTTCtcgtgggagggat
gagtTTGCGGCCGCGTGGTGACTACCTCCTGGTGCCAAGCCGCCGCCTTC
AGGTTTACGTTTTCCATGCTTTAGCGCACAATAAATGTAGAGAGGATAGA
CCATGTGGGCTGGATTTGACAAGTTGTTTCATGGTAACACATGCGGGCAT
ATTTCATATTAGAAATCTTACTGTGCATGGCCACTGgtaaaaaaagggag
aggacacgAGACTACGCTGAGCTCTGGGATCAACATGGAAAAGTCGATTT
ACTCTTCTTTATCCCACGGTCTATCATGGTTTTTGTTGAGCAGTTTTGGA
CAAAAGGAGCATCCATTCTCAGGACTGTATCGTGCTTCCATTTCTTTCTC
TCGTTATATGGACAACAAATGCTGTTTAGACGTATGTATAATTATACAAG
CCTTCCTACTtatctttctccctctccctcatcctcctcttccccactTG
CTGATCCAGCTAAGTCCATCACCGCCAactgctcctgctgctgatgGAAG
AGTCTAGTTTGTTGTCGGGCAAAGGCGATCATAGCAAAAAGAAGCAGTAA
TCCTACGACTACGGAAGGGATCAACAcagcaagaggaaggccccGTTTGG
GGGCTTCCTCCGTGTCCCCGACTGCAATTACCACAGACATAGCTTGTCCA
TTGACCATGTACTTATTGGGAACCCTATATGATTTAATGTATGCCTGCTC
GAAGGCTTGTACCCCATTGCTAAAGGCAGCAGCTTGCAAGTACCGATTGA
GGGTGCCATCCTTCTTGGTCGTGGAAAGTTGCCGCACTAAGGCATTGTAG
AACGTCAAACCATCTGCATAACCGGTTGTAATCAGGAGAGTCGTAACTCG
AACTTGTACCGTGAGCTCGTATCTTCGAAGGCGCTTCGATCGTACTTCAT
TGATGTCAGCGCGCTTTATGACAGTAACCGCGAGGGACAGGGCGTCCTGt
tgggaggagagaggggagatgATCTAGCGATGAAATGATACATGGGCTTC
TTTACATGTGTCCATGCGTAGCCTGGATTACGACTCGAGTCCTCGCTGTC
ACCCTCGAGTACCTTGATTACGTTCTGAGCAGGAGCATAGGTAGGGAAGT
TGGCGGGCGACAGGTCGGACGGAGTAGGCTTTGGGAACCTGATGGTGAGG
TTGAAGATAATGCTGACATGGGTCGGTGGTAGATTtgtgggggcgggcgt
gggcgaggtcgtgggggagaagatTGGGTGCAGTGTGGGGCCAAAGGCGG
CTGTAGGGGACGGGGACACATTCCAGCCATTCCCAGAGTCCGTGGGCTCG
GTTGGTGCCCGCGTCGGGGCCAGAGAGTTGTCTCCAGTATCAGTCACACC
ACCAGACGAAGGAAGCTCTGGGGCGTCGAAATCATTCAGgtcctccccat
cgccttGCAGCTGTTGTGTACAAAGATAGGGAGTTAGTGGCTGTTGAGCC
TTAAGCTCTCCATGCTCGTACAAGTAATACGATCAAGACCAACACAATGA
AAAGCAATCAAGAAGAGCATAAGAAATGTCTGAAAAGAATCGTATGGCAG
CATGCAGAGCTTTAGTCAATCGATGATCAAAAAATCATCCGGCCCTAAAA
AACGGTGGCCCATGTAAAAAAGC back to topCoding sequence (CDS) from alignment at CM002457.1:869109..871081+ >rna1529 ID=rna1529|Name=rna1529|organism=Nannochloropsis gaditana|type=CDS|length=354bp|location=Sequence derived from alignment at CM002457.1:869109..871081+ (Nannochloropsis gaditana)
ATGCGGGCATATTTCATATTAGAAATCTTACTGTGCATGGCCACTGgtaa
aaaaagggagaggacacgAGACTACGCTGAGCTCTGGGATCAACATGGAA
AAGTCGATTTACTCTTCTTTATCCCACGGTCTATCATGGTTTTTGTTGAG
CAGTTTTGGACAAAAGGAGCATCCATTCTCAGGACTGTATCGTGCTTCCA
TTTCTTTCTCTCGTTATATGGACAACAAATGCTGTTTAGACGTATGTATA
ATTATACAAGCCTTCCTACTtatctttctccctctccctcatcctcctct
tccccactTGCTGATCCAGCTAAGTCCATCACCGCCAactgctcctgctg
ctga back to top
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