EWM29148.1, cds1526 (CDS) Nannochloropsis gaditana

Overview
NameEWM29148.1
Unique Namecds1526
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:869599..869952 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29148.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100007g44.6475.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:869599..869952 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM29148.1 vs. NCBI_GenBank
Match: gi|585111668|gb|EWM29148.1| (hypothetical protein Naga_100007g44 [Nannochloropsis gaditana])

HSP 1 Score: 245.358 bits (625), Expect = 1.934e-82
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 
Query:    1 MRAYFILEILLCMATGKKRERTRDYAELWDQHGKVDLLFFIPRSIMVFVEQFWTKGASILRTVSCFHFFLSLYGQQMLFRRMYNYTSLPTYLSPSPSSSSSPLADPAKSITANCSCC 117
            MRAYFILEILLCMATGKKRERTRDYAELWDQHGKVDLLFFIPRSIMVFVEQFWTKGASILRTVSCFHFFLSLYGQQMLFRRMYNYTSLPTYLSPSPSSSSSPLADPAKSITANCSCC
Sbjct:    1 MRAYFILEILLCMATGKKRERTRDYAELWDQHGKVDLLFFIPRSIMVFVEQFWTKGASILRTVSCFHFFLSLYGQQMLFRRMYNYTSLPTYLSPSPSSSSSPLADPAKSITANCSCC 117
The following BLAST results are available for this feature:
BLAST of EWM29148.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111668|gb|EWM29148.1|1.934e-82100.00hypothetical protein Naga_100007g44 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1529rna1529Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications