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Properties
| Property Name | Value |
|---|
| Product | adp-ribosylation factor gtpase-activating protein agd14 |
| Orig transcript id | gnl|cribi|Naga_100007g54.6441.mrna |
| Orig protein id | gnl|cribi|Naga_100007g54.6441 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:838670..840620 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1521 ID=rna1521|Name=rna1521|organism=Nannochloropsis gaditana|type=mRNA|length=2380bp
ATGCTGATACGCGCACACACATTCACTCGCCACAGACCGTCCGGAAGATT
GGGCAGATTTAACTTTTCTTCTTCGAACGACTTGGTGCCCAACGCCTCCG
TCCGCATCTATATTTCCTTCGTTTCGTCTTCTGCCAGCACGCCATCAACC
ATGCATCGCCTGCGCTCGCGGGAACGAAAGCACTATTTCAGCGCGTCATT
TGCCATGCTGCTGCTGTCAACCGTCGCAAGCGCACAGCAGGCACAACCCC
CATCTACCCCTATCAACCCTCCAGATCCTCCTCCGCCTCCTCCTCACACG
AGTTCGCCCGCTCTCAATACGGAAGCAAGTCGGAAAACAAACATGAAAAT
CACTTGGCCTACACAACACGGCTTGATCATTGACGCCGGTAGCACGGGCA
GTCGCATGCACGTGTATCAATGGGACGCGCGTCGCTTTGACACGGTGCCT
CCCCCCTTCAGCTTCCCCCTCACCAGCAATCGATGGACAAACCGTCTGGC
GCCAGGCATATCGGCCTTCGCCGACTGCCCTCAAAATGTGGGCACCTCCT
TGGACTCGCTTATTTCTTTCGCGAGAGAGGTACTGGCGGGCAAAGAGCAC
CAGTTCAAGTACTTTCCCATCTACCTGAAGGCCACCGGTGGGATGCGTCA
GTTGTCGCCCTCCAAGCGCGAAGCCATCATAGATGAGGTCCGAAAATACA
TGATGAATAAGACCACTTGCCCGTTCTATTTTGAGCACGATTTTGCCCGC
GTCGTCTCAGGGGAAGAGGAAGGAATCTACGGGTGGACAGCCATCAATTT
CTTGCTCGGAAAGCTTTTGCCGGCGAGCGCGGGCACGGGGACGGTGGATG
CGAACTCCTCTGTGGGCGCGCTGGACCTGGGGGGCGCATCCGCTCAGATA
TCTTTCTTCGTCCCTGACCAGGACATCCTTGCCAACATGTTCAAGCTCCA
GATTGGGGCCCAGAAACACTGGAACGTGTACGTGCACTCTTTCCTCTACT
TCGGGATCAACTCCGCGCGCGACCGGCTGCACGATACGCTCACGGAGGAG
GCCCAGGCCAACAAAGACCGGACCGGGAAGAAGAAGCAGGTGACGGACAG
CATGAATGCCGTCGTGCCGTCTGGCTCCCTGCGCGTGACCAACCCCTGCC
TCCCCAAGGGTTACGAGGAGTCTTTCCGCCACCAGGGCAAGGACTACGTG
GTGGAGGGCGCCACGGGGTCCTTCAGCCTGTGCATGGACCGGGTGGTCCC
CCTCCTACGCAAGGACCTCAACTCCTGGTGCAACTTCGCACACAACCATC
AGTGCTCCTTTGCGGGGGTCTATCAGCCCGACCTGCCCCCTGCCCCCGGA
AATTTCGGGGAGTTCTACGGATTTGGGACTTTCAAGGACATATGGAAGAT
GTTGGCGATGCCGGACGTCAAAGCCAACATGAGCGTGTACAAGGAGCGGA
CCGAGGCCATGTGTGCCCTGGATTGGGATGCCTTACAGCACATGAACAAG
CAGAAAAAGAAGAAGAAGCGGGAGAAGAGTCTCCCTTATCTGGCGCACTA
CTGCTTTGTGGCCGCATTCGGATATGCGCTCCTCACAGAGGGGTACGGGT
TCGAAGCCTCACGCAATCTGACGGTAGTCAGCAAGATCGACGGACTCAAA
GTTACCTGGGCTCTGGGCGCCATGCTTTACGAGATAAATGCGCTGCCTTG
GGAATACGCCAAGCCCCCAACTTGGATTACAGCCTTCATCGGCTCTTTCC
TTCTCAACATATTGCTCTTTGCGGGTGTCATATTCTTCCTAAGAAAGAGC
CATTTGAGTGCTGCCGCTATCATCAATCGTAAGCGTGGGATCTCTTCCAC
AGGTTTAGGCAGTTCGGACAGGTCTTCTGATGGGATCGGGGGCGTTAGCA
GGTCCAGCTACCAAAGCATACCAACAAGCTCTCAAGTGTAGTGCATTTTA
CAAGGATTGCAATGTACTGGCTTGGGACTGAAATGAGTCTATGCATCAGA
CATTCGTACGAAATCGTTAAACCTGCCAAAAGAGACGGCATGGGAAAATA
TTGTAAGCATGCATTTCCACAGCAGACGGAGGTGCCCCACAGCCATCCGA
CTTTTCTACTTAGGTTGTTTTTTCTCTTGTTTTTCAAACATTAAGTCACT
GATTACATCATGTCTCCCCGACCGTGTTACAGCAGTACAATGAATAGACG
ACGTGACAAAGAATTGCGGCCATGCTATCATTCACCGCATGCGATAGTGT
AGTGATCTTCGTGTGTGCGAAACCAGCAGCGTACTCTTCAAGGGCGAAGC
AGACGACATTAAGAATCGGTGACTCCCTGAGTAAAAATCATCGGAAGAGT
CCGGAAGACAATTAAACAACGATCTAAGCA back to topprotein sequence of rna1521 >rna1521-protein ID=rna1521-protein|Name=rna1521|organism=Nannochloropsis gaditana|type=polypeptide|length=435bp
MAATADDKRIKLLLEQIRRLPHNKSCVNCGKVSIAGHGDICIKFLTFLCH
TCKSAHQSFSHRCKNVTLSNWTLAEVQQLSDQAGGGNQNARQTWLGKLDG
TLLLRPGDSLQDVKNFVNDAYNHKRYWKDPQMIAKSTSVAAEGTQSASAS
TASLPRQSIGGIGSRLEGPMSEIPDASTVKNLLDLESDCIPTGPARSFPT
LLEPATVTSCTQFSERVARNGLSDRCPLTGSVGQTGAPKSSSSLMCTSTI
AAPQPQDMQFGDFLGAFSPSNPTPGRTPAALAQPGSHSNQALNLNDDFGE
FMSSPPSQGLSMSTQSMRPVPLTAPQPRPSMVAPRVQPEDPFAMLAPDRP
TLASIPLSHLHAQKMHPVGLAPACVIGSGVLAPQVFSINAPHSSFQPGQV
PLHMVMNATGAHGWKAGQQCTSQEPDPFADLDWRK back to topmRNA from alignment at CM002457.1:838670..840620+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1521 ID=rna1521|Name=rna1521|organism=Nannochloropsis gaditana|type=mRNA|length=1951bp|location=Sequence derived from alignment at CM002457.1:838670..840620+ (Nannochloropsis gaditana)
CGGGAACATGATGCTTGTATGTGAACGATTTCTCAACCGTTATCCACATG
CGTCGTATTTTATCTTCTTCTTTCAATTAAGGACCGTCCAGGACATCCTA
GGGACGGAGACGATCGCGttagggaagagggggacagCGGATATCAATTT
AGGCGTACCAAGCTATCATGGCTGCCACAGCGGACGATAAACGAATCAAG
TTGCTGCTGGAGCAGGTATGTCCTTTTTTAATCATAAGTGTGGGCGCGAA
TTAGAGACGCGGGCACGCTAGGTTTTCAGAAATGCACAGCAGAGCCAGGG
CACTACTTGTGGATCATCTTCGTCTATGTGATATAGGGTTAGTAGCTTTT
AGTCGGCTCTAAGCATGACATGACTGTGCTAGGAGGAAACCGGCACTCTG
ACACTTGTTATTCTAAAATGCACTACGAACTTGATTTAGATCCGTCGCCT
TCCACACAACAAAAGTTGTGTTAATTGCGGCAAAGTAAGCATCGCAGGTC
ATGGAGACATTTGCATTAAGTTCCTGACATTTTTGTGCCATACTTGCAAG
AGTGCGCATCAATCATTTTCCCATCGATGCAAAAATGTCACCCTGTCCAA
CTGGACCCTGGCTGAAGTGCAGCAGCTCTCTGATcaggcaggtggaggaa
atcAAAATGCACGCCAGACATGGCTGGGCAAGCTCGATGGAACACTGCTG
CTGCGACCCGGCGACTCCTTACAAGATGTTAAAAATTTCGTGAACGACGC
CTACAACCACAAACGATATTGGAAAGATCCTCAAATGATCGCTAAGAGCA
CTTCGGTGGCTGCCGAAGGCACCCAATCGGCTTCGGCAAGCAccgcatcc
ctccctcgacagaGCATAGGGGGGATCGGCTCACGGCTTGAGGGGCCCAT
GTCTGAGATCCCGGACGCATCTACTGTAAAAAATCTGCTTGATCTTGAGT
CTGATTGCATACCCACGGGGCCTGCGCGatccttccccaccctgcTGGAG
CCCGCAACAGTCACATCCTGCACGCAGTTCTCAGAGAGGGTTGCACGCAA
CGGCTTGAGCGACCGTTGCCCTCTGACTGGAAGCGTCGGTCAGACTGGTG
CTCCAaagtcctcgtcctccttaaTGTGCACGTCAACAATTGCAGCGCCT
CAACCTCAGGACATGCAGTTTGGGGATTTCTTGGgcgctttttccccctc
gaaCCCTACCCCCGGCCGGACGCCTGCCGCACTCGCTCAACCCGGAAGTC
ACAGCAATCAAGCCTTGAATCTCAATGACGACTTCGGCGAGTTtatgtcc
tctcctccatcccaggGGCTCTCCATGTCGACTCAGTCAATGCGTCCCGT
GCCGCTCACGGCCCCTCAACCTCGGCCTTCCATGGTGGCCCCCCGTGTGC
AACCCGAAGATCCCTTTGCCATGCTCGCTCCGGATCGACCCACCCTTGCA
TCCATCCCACTCTCGCATTTGCATGCACAAAAAATGCATCCCGTAGGGCT
TGCGCCTGCGTGCGTGATAGGCAGCGGAGTACTTGCACCGCAGGTTTTCA
GTATCAACGCGCCGCATTCGAGCTTTCAGCCTGGGCAAGTGCCCTTGCAT
ATGGTTATGAATGCGACAGGCGCGCACGGCTGGAAAGCAGGGCAACAATG
TACATCCCAAGAACCTGATCCTTTCGCGGATTTGGATTGGCGGAAGTAGG
CTGCGACAAGAAGCTACTCTTGAAACATACATGTAGCGCGGTCGAGTGCA
GATATTGGCATGTAGAGAAGCGACAGATGAATGGCATAAGAGGGGAGCGG
GTGCGAGCGAAAAGAATTAACAACAGctcgccgcttcctttctcctgtAC
ATCGAAAATGATGACATCGTGCTAGGGCCCTAGGCCAAGCCTGAAAACGT
TCTCAATTTTGTCAGGTCTAGCAACATGCCAACCCTACTTCACCCTCAAG
C back to topCoding sequence (CDS) from alignment at CM002457.1:838670..840620+ >rna1521 ID=rna1521|Name=rna1521|organism=Nannochloropsis gaditana|type=CDS|length=2616bp|location=Sequence derived from alignment at CM002457.1:838670..840620+ (Nannochloropsis gaditana)
ATGGCTGCCACAGCGGACGATAAACGAATCAAGTTGCTGCTGGAGCAGAT
CCGTCGCCTTCCACACAACAAAAGTTGTGTTAATTGCGGCAAAGTAAGCA
TCGCAGGTCATGGAGACATTTGCATTAAGTTCCTGACATTTTTGTGCCAT
ACTTGCAAGAGTGCGCATCAATCATTTTCCCATCGATGCAAAAATGTCAC
CCTGTCCAACTGGACCCTGGCTGAAGTGCAGCAGCTCTCTGATcaggcag
gtggaggaaatcAAAATGCACGCCAGACATGGCTGGGCAAGCTCGATGGA
ACACTGCTGCTGCGACCCGGCGACTCCTTACAAGATGTTAAAAATTTCGT
GAACGACGCCTACAACCACAAACGATATTGGAAAGATCCTCAAATGATCG
CTAAGAGCACTTCGGTGGCTGCCGAAGGCACCCAATCGGCTTCGGCAAGC
AccgcatccctccctcgacagaGCATAGGGGGGATCGGCTCACGGCTTGA
GGGGCCCATGTCTGAGATCCCGGACGCATCTACTGTAAAAAATCTGCTTG
ATCTTGAGTCTGATTGCATACCCACGGGGCCTGCGCGatccttccccacc
ctgcTGGAGCCCGCAACAGTCACATCCTGCACGCAGTTCTCAGAGAGGGT
TGCACGCAACGGCTTGAGCGACCGTTGCCCTCTGACTGGAAGCGTCGGTC
AGACTGGTGCTCCAaagtcctcgtcctccttaaTGTGCACGTCAACAATT
GCAGCGCCTCAACCTCAGGACATGCAGTTTGGGGATTTCTTGGgcgcttt
ttccccctcgaaCCCTACCCCCGGCCGGACGCCTGCCGCACTCGCTCAAC
CCGGAAGTCACAGCAATCAAGCCTTGAATCTCAATGACGACTTCGGCGAG
TTtatgtcctctcctccatcccaggGGCTCTCCATGTCGACTCAGTCAAT
GCGTCCCGTGCCGCTCACGGCCCCTCAACCTCGGCCTTCCATGGTGGCCC
CCCGTGTGCAACCCGAAGATCCCTTTGCCATGCTCGCTCCGGATCGACCC
ACCCTTGCATCCATCCCACTCTCGCATTTGCATGCACAAAAAATGCATCC
CGTAGGGCTTGCGCCTGCGTGCGTGATAGGCAGCGGAGTACTTGCACCGC
AGGTTTTCAGTATCAACGCGCCGCATTCGAGCTTTCAGCCTGGGCAAGTG
CCCTTGCATATGGTTATGAATGCGACAGGCGCGCACGGCTGGAAAGCAGG
GCAACAATGTACATCCCAAGAACCTGATCCTTTCGCGGATTTGGATTGGC
GGAAGTAGATGGCTGCCACAGCGGACGATAAACGAATCAAGTTGCTGCTG
GAGCAGATCCGTCGCCTTCCACACAACAAAAGTTGTGTTAATTGCGGCAA
AGTAAGCATCGCAGGTCATGGAGACATTTGCATTAAGTTCCTGACATTTT
TGTGCCATACTTGCAAGAGTGCGCATCAATCATTTTCCCATCGATGCAAA
AATGTCACCCTGTCCAACTGGACCCTGGCTGAAGTGCAGCAGCTCTCTGA
TcaggcaggtggaggaaatcAAAATGCACGCCAGACATGGCTGGGCAAGC
TCGATGGAACACTGCTGCTGCGACCCGGCGACTCCTTACAAGATGTTAAA
AATTTCGTGAACGACGCCTACAACCACAAACGATATTGGAAAGATCCTCA
AATGATCGCTAAGAGCACTTCGGTGGCTGCCGAAGGCACCCAATCGGCTT
CGGCAAGCAccgcatccctccctcgacagaGCATAGGGGGGATCGGCTCA
CGGCTTGAGGGGCCCATGTCTGAGATCCCGGACGCATCTACTGTAAAAAA
TCTGCTTGATCTTGAGTCTGATTGCATACCCACGGGGCCTGCGCGatcct
tccccaccctgcTGGAGCCCGCAACAGTCACATCCTGCACGCAGTTCTCA
GAGAGGGTTGCACGCAACGGCTTGAGCGACCGTTGCCCTCTGACTGGAAG
CGTCGGTCAGACTGGTGCTCCAaagtcctcgtcctccttaaTGTGCACGT
CAACAATTGCAGCGCCTCAACCTCAGGACATGCAGTTTGGGGATTTCTTG
GgcgctttttccccctcgaaCCCTACCCCCGGCCGGACGCCTGCCGCACT
CGCTCAACCCGGAAGTCACAGCAATCAAGCCTTGAATCTCAATGACGACT
TCGGCGAGTTtatgtcctctcctccatcccaggGGCTCTCCATGTCGACT
CAGTCAATGCGTCCCGTGCCGCTCACGGCCCCTCAACCTCGGCCTTCCAT
GGTGGCCCCCCGTGTGCAACCCGAAGATCCCTTTGCCATGCTCGCTCCGG
ATCGACCCACCCTTGCATCCATCCCACTCTCGCATTTGCATGCACAAAAA
ATGCATCCCGTAGGGCTTGCGCCTGCGTGCGTGATAGGCAGCGGAGTACT
TGCACCGCAGGTTTTCAGTATCAACGCGCCGCATTCGAGCTTTCAGCCTG
GGCAAGTGCCCTTGCATATGGTTATGAATGCGACAGGCGCGCACGGCTGG
AAAGCAGGGCAACAATGTACATCCCAAGAACCTGATCCTTTCGCGGATTT
GGATTGGCGGAAGTAG back to top
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