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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100013g71.9756.mrna |
| Orig protein id | gnl|cribi|Naga_100013g71.9756 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:391399..393435 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna151 ID=rna151|Name=rna151|organism=Nannochloropsis gaditana|type=mRNA|length=4163bp
CTCACAGGTTCTAGCATGCTTCGCAAGGTGTTAGCACAGCGAGTAAAGGT
CTCGAATGCAGCCTGCAGTACTACTGTCTCCAAGGGCACATCAAGGACAT
GGGCGAGTGTACGGGCCCGCCGCCACATAGGTAGCATTAAATTTACCGCT
CCCTCAGCTAAACCTCAAGCATGTTGTTTCCAAGCGCATGTGCCTATCTC
ATCGTCATACGTGGCCCAGCGACGCCTGGTTTTCTCACGGGCATTTAGCA
CGAAAGTCCCCACGGCTTCCGAAAACGCCGGGGCACCAGCAACAGGCGGC
GTCGTAGGCCTGCGGGCAGGGGTGCCATACGCCCAGCTCATTGTCGGGGT
GCCACGTGAGACATATCCAGGTGAATGCCGAGTAGCGGGGACCCCTGAAA
CCGTGAGCAAGCTGGTATCGCAGGGGATCAACGTGAACGTCGAAAAAGGA
GCTGGGGCCCGCGCCGGGTATACCGACGCCGCGTACCTGGCGGCTGGAGC
CACCGTTGTGGACACCGGCGCCGTTTGGAGGTCGCACATTGTCACGAAGG
TGCGCCCACCGTCTGTGGAAGAAGCCGAGCTTCTAGAAGACCGAGCACTG
ATCTCCATCGTACAGCCTGCCCAGAACCCCGCATTGCTGCAAACCTTCCA
GAAGAACAAAGCCACGGTCCTGGGCCTGGATCAGCTGCCCCGCACGCTCT
CGCGCGGACAGGCGTTTGACGTCCTATCGTCGCAGGCGAACATCGCCGGG
TACAAAGCCGTTCTTGAGGCCTTCAATGCCTTCCAACGCTTTGTGCCCGG
GCAGATAACGGCGGCCGGACGGGTACAACCTGCCAAAGTGCTGGTCCTAG
GGGCCGGGGTGGCGGGGCTGTCGGCAATACAGCATGCTAAAAATTTGGGG
GCGGTCGTGCGGGCGTTTGACGTGCGCCCGGTGGTGAAGGAGCAGGTGGA
GAGCCTGGGAGGGGAATTCGTGGAGGTGGCCCATCAAGAGGACGGGAGCG
GCGCGGGCGGATACGCCAAGGTACGTGACCTCCGTCCATCTGCTCGGCCC
ATCAGACATGGATGGGCAACGAGTCTGGTCGGAGGGGGGGGGGGGTTCAT
AGCTCCAATGTGTTGCGGAGAGAGACCGACCCTGTCTGCGTGTCCTCGAG
CTGATCGTCTCTCTCCTCCCAGGAAATGTCTGCCGCCTGGCACGAAGCCG
CCCGTCGGGCCCTGGCGGAACAGTGCCGGGAATGCGACATCATTATAGCC
ACGGCGCTGATTCCGGGGAAAAAGGCCCCGCGTTTGATCCACGAGGACAT
GGTGGCTCTCCTCAAGCCGGGGTCCGTGGTCGTGGACCTGGCGGCCGAGT
CCGGGGGGAACGTGGCGGGCTCGGAGCCCAACCGCGTGTACACGACGGAG
CAGGGCGTGACCATGGTCGGGTTCACGGACCTGCCCTCCCGGTTGCCCAC
CACGGCCTCCACGCTCTTCGCCAATAACGTGAGCAAGTTCCTCCTCTCCC
TCGGGCCACAGACGACCAAGGAGAAAGGGGTCTTCAAGATCGATCACCAG
GATGAGGCTGCCCGGGGATGTCTGATCACAGACCACGGGGAGCTGACCTG
GCCTCCGCCCCCCCCTCCGAGTCTGGCGGCGGCCACAGGCACAACGCCGG
CTGGGAAAGCGAAGGCAAAGGACGCTCAAGTGGTGGCGGTCGACCCTCGA
CAGGCATTTCTGACTACGGCCCTGTGGGGAAGCGTGGGCGCGGGGGGTAT
GGTGGCCTTGGGAATGGCGGGTCCTGGCCCGGCGTTTAACAGCATGCTCA
CTACCTTCGCCTTGTCGACCATGTTGGGGTACCACACCGTCCAAGGCGTA
GCCCACTCTCTGCACTCGCCCTTGATGAGCGTGACCAACGCGATCAGTGG
GACCACGGCCTTGGGGGGAATGATCCTTTTATCCCACGGCGTACACGACG
GCCACCTGACCGCCCAGGTCCTGGGAGCGGGCGCCACACTGATCTCAGCG
GTCAACATCGGCGGAGGTTTCAAGGTGACCGGAGCGATGCTGGACATGTT
CCGGCGCAAAGAGGACGCCCCCGAGTACAACCACCTCTACGCCATCCCGG
CCGGGACCCTAGCCGCCGGGTATCTGTACGGGCTCCACGCCGGCCACGGC
GAAGACTTGACGTCCCTCGTTTCCCTTGTCTCCGCGCTGTGTTGCGTGGG
AGGTATCGCGGGGCTGTCTTCCCAGCAGACGGCACGGCTCGGCAATGTCC
TTGGGATGAGCGGCGTGGGACTGGGCACGCTGGCCACTCTGGGCTCTCTC
CAAGCCCCCATGCCCGTTCTCGCAGGGGTCATGGGTCTCCTCGGCGGGGG
AGGTCTGATGGGCGTGCGAATTGCCGCCAAGGTGGGCCCCTCCGAGCTGC
CCCAGACCGTCGCCGCTTTCCATTCGCTCGTGGGGCTGGCGGCGCTTGGA
ACGGCTGTCGGGGACGCGACGCTCTACCTGGGGAATCCAGAAATCATGGA
CTCCACCCGCATGTCCGCAGTCTACCTCGCAAGTGTGATCGGTTCCATCA
CAGCCACGGGCTCCGTCGTTGCCTTTGGGAAGCTGCAAGGCTGGCTGCAT
TCCAAGGCCTTGTCCCTCCCAGGTCGGGACGCAATCAACCTCGGCCTCGG
CGTCGGAACTGCCGCCAGTGCAGTAGGCTTTGGTCTGGCCGGCTCGCCCG
AAGGGGCGCTGGCGTGCCTTGGAGCAGGATCCTTGTTGAGTGGAGCTCTC
GGTGCACACATGACTGCATCAATCGGGGGGGCCGATATGCCAGTGGTGGT
GACTGTCCTGAACTCGTACAGTGGCTGGGCATTGTGCGCGGAGGGGTTCA
TGTTGAATTCTCCTCTCTTGACGACGGTCGGGGCATTGATTGGGTCGTCC
GGTGCCATTCTGACCCACATCATGTGTAAAGCGATGAACCGTGACATTGT
TTCCGTGCTCCTGGGGGGCTACGGCACTTCGTCGACGGGCAAGGGGGAGG
CCATGAAGATCGAGGGCGAGCCGACCATGACGGATGTTGCGCAGACTGTG
GAGCTTCTGACGAATAGCAAGAAGGTGGTGATTGTTCCCGGCTATGGTCT
GGCCGTGGCCAAGGCTCAGTACGCCATTGCCGAGCTAGTTGAAAAGCTGC
ACCATCACGGCATCAAGACTACCTTCGGCATTCATCCCGTGGCAGGGCGC
ATGCCTGGGCAGCTGAACGTGCTACTGGCGGAAGCGGGTGTACCGTACGA
CGTGGTACAGGAAATGGACGAAATAAATGAACACATCCACGAATCAGACG
CATGCCTTGTGATAGGGGCGAACGACACGGTCAACAGTGCGGCTGAGGAA
GATCCAAACAGCCCTTTGGCGGGTATGCCCGTGATTCGAGCTTGGGAGAG
TAAAAACGTCGTTGTCATGAAGCGGTCGATGGCCTCTGGATACGCCGGTG
TGGATAACCCTCTGTTTGTGAAGCCTAATACCCAAATGCTTTTGGGCGAT
GCTAAGAAGACCGTGGATTCAATTTTAGCCGCCACAAAAGAGCATTATGC
CAAGGAAAGCGGTGCAATTTAGATGAATATACAAAGGGGAAATGCGTCCG
AGTGGGACCTGAGCCAGTGTACTGATCTATACGACATTGTGTCACACCCA
GTGGCCAGGCAAGTGGGCTGCCAGTGGGAGCACCGGCCGAGGGTGTGACT
GAAGTTTCATGGCCATGTTTTCGCGAGGGGTGGGGAGGGGGGGGGAATGC
CATTAGATAAGCGAGAAAGCAGAGCTTAGGAGGTCATGCTTGTAATCAGT
CTGAGGCGCATGCTTGGTGAAGGGCACTCGGGGAAGACACACACTTGACC
GCGTTATTTTCACGAAAACCAATATCTGAAACTCAGATGGTCACCAGATG
AAAACTTCTGGAGTAAAAGCGACTTTCTGGCTCTGTGAACTCAACCAAGC
GTGAGGCCATTCCAAGAATGCCACATTCCAACATCAAGTGATGATGCCAA
ATTTTCGACATTCATCGGAGTAAATCCCAACGGCTTTAAAGTATTTATTT
ATCCCGTCGCATTCTTTACTTTTGCTTCCTCTAACGAAGGCATCAAGGGC
AACGCTAGAACACTTGTTTTGTTCCTCGTCCTAACACTATGGTAAGTAAG
AAGACTTCCCTGA back to topprotein sequence of rna151 >rna151-protein ID=rna151-protein|Name=rna151|organism=Nannochloropsis gaditana|type=polypeptide|length=355bp
MGNRAYGRVLRRREAIFATRNLLSSCLVAFFLLRCNDGNVQAFQSVIPLK
SSRGIILSAAPQSSVPAPIGVTAETVTFPNTGLSMEVLSAKSHSSSSSGP
DNILAALSSFFWPKVRRKQPLVFIHGSFHSAWCWAEHFLPFFAARGYDSY
AISCRGTFPSPSPNQEASITINTHAADLRDFLRVAFPPSEQDTPQPILIG
HSFGGAILLKLLEQPTPSPLRGVAFLCSVPPSGNGPMTARFLKRDFILAL
KIVLGFVAKKGAEWDWLCQELFFSPSLPPDLLRKYKKRLKKDSVVGIDVK
DFLKELPVLRADGATGQGRWVKEVPSRLVIGRGEDCLEYLERGLVTRTLD
SLLMA back to topmRNA from alignment at CM002455.1:391399..393435- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna151 ID=rna151|Name=rna151|organism=Nannochloropsis gaditana|type=mRNA|length=2037bp|location=Sequence derived from alignment at CM002455.1:391399..393435- (Nannochloropsis gaditana)
TCCCTTCTGCTACTACGGAGACAAGCGCTCAAAACCTGGCCTCAACCAGC
CTGGAAAACAAAGGACTTGACAGGCATGAATTTCTCTACCACACCACGTA
CAGGTCCTCTGGTCCTTGGCGAGCCCGGGAGTCTCAGAGGGGTGCAACTC
AATTACTCCCCCAAATAGAGGACATTAAGTCACAGCTTCGACAATTTTGA
CGTTTCTGACGCGTTACAGGGCTATAGTAATGGGCAATCGCGCGTACGGG
AGAGTTTTGCGCCGAAGAGAAGCCATTTTTGCGACCAGGTATGTACTTTT
GTGGCTTTGGAACTTGATCTGACGAGGGATGCGAGAACTAGCGTATACGA
TAAAGCTCGAATCACATTTTAAATCTCTTCTGCCGTATTCGGCTTGGTGA
TCAATGTGAAAACATTTTGAGCGGGAGAGCGGGCAACATTTCTTCAATTC
GTTTATTTTTTTTCCAATTTCTAACTTGCATTTGTGCAGGAACCTCCTAT
CCTCATGTCTCGTCGCCTTCTTTCTTCTACGTTGCAACGATGGGAATGTT
CAAGCGTTTCAAAGTGTAATACCTCTTAAATCTTCACGAGGCATCATACT
TTCCGCTGCACCTCAAAGCTCTGTACCTGCCCCAATCGGAGTCACCGCGG
AGACGGTCACCTTCCCTAATACGGGGTTGTCCATGGAGGTCCTCAGCGCC
AAATCACACTCCTCGTCCTCGTCCGGTCCCGACAACATACTGGCAGCCTT
GTCTTCATTTTTTTGGCCCAAAGTCCGCCGTAAGCAACCGCTGGTTTTCA
TCCACGGATCTTTTCATTCTGCCTGGTGTTGGGCCGAGCATTTCCTTCCC
TTTTTTGCAGCACGAGGATATGACAGCTACGCTATCTCCTGTCGGGGCAC
CTTTCCTTCTCCGTCACCCAATCAAGAAGCAAGTATAACCATCAATACCC
ACGCGGCAGATCTGCGAGACTTTCTGAGGGTTGCCTTCCCTCCTAGCGAG
CAAGACACCCCTCAACCGATCCTCATTGGTCACTCGTTTGGCGGAGCCAT
CCTCCTCAAACTGCTTGAGCAGCCCACCCCCTCGCCACTGAGGGGCGTCG
CTTTTCTGTGTTCCGTTCCTCCCTCTGGAAATGGTCCGATGACTGCTCGC
TTTCTCAAGAGAGATTTCATCCTCGCGCTGAAAATCGTCTTGGGCTTTGT
GGCCAAGAAAGGGGCAGAGTGGGACTGGCTGTGTCAAGAGCTCTTCTTCA
GCCCCTCGCTTCCTCCTGACTTACTTCGAAAGTACAAAAAGAGGCTGAAG
AAGGACTCTGTGGTCGGCATCGATGTTAAGGATTTCCTCAAGGAACTGCC
GGTCTTGCGCGCGGACGGGGCGACAGGGCAGGGCCGATGGGTGAAGGAAG
TCCCGTCTCGTCTCGTGATCGGTAGGGGGGAGGATTGTCTTGAATATTTG
GAAAGAGGTCTCGTTACCCGGACACTCGACAGCTTGTTGATGGCATAATC
TAGATTCGAATCAAAAGTTGCGTGATGGTCTGCAGTTATCACCAGGCATG
TGAGGAGGCTTCCCTGAGCGTGGGACCTAATAGATCCTGCATTTTTATTT
CCCTTCCCGAGCACTTTTATTTCCCTTCCCGAGGAGTGTCTCCCTCGACT
GTGGTCGGCGTTCTGTTTTATCTTCGCGCTTCTCGCTGACAAGTTTCCTT
GTTTTCTTCTCGACGCAGGGGCGGAACGCGACAAGCTTGTGGACAAAGAA
GGTGTGGAGGAAACGGCACGATTCGTAGATGCAGAACCACCAGTCTTTCT
TCCAACGGCGCACGATGCCATGCTGGATCCAGAATGGCGTCTTGCGGCCA
ATGCTTTGCTGCAGTGGTTGAATGCAATGGATCAGGCGGTCAAGAAGTAA
AGTACTTGGGAAACCCCAAATCGAGCTTGAACGGCGGATAAAGTCATAAA
ATAACGTGCCCCACTGTTTGAATAAGACTCCCCCTTCTCAACTGGTAGGA
AAATGATGAAAGATTTTTTATTTTGTTACAAAAACAT back to topCoding sequence (CDS) from alignment at CM002455.1:391399..393435- >rna151 ID=rna151|Name=rna151|organism=Nannochloropsis gaditana|type=CDS|length=2136bp|location=Sequence derived from alignment at CM002455.1:391399..393435- (Nannochloropsis gaditana)
GAACCTCCTATCCTCATGTCTCGTCGCCTTCTTTCTTCTACGTTGCAACG
ATGGGAATGTTCAAGCGTTTCAAAGTGTAATACCTCTTAAATCTTCACGA
GGCATCATACTTTCCGCTGCACCTCAAAGCTCTGTACCTGCCCCAATCGG
AGTCACCGCGGAGACGGTCACCTTCCCTAATACGGGGTTGTCCATGGAGG
TCCTCAGCGCCAAATCACACTCCTCGTCCTCGTCCGGTCCCGACAACATA
CTGGCAGCCTTGTCTTCATTTTTTTGGCCCAAAGTCCGCCGTAAGCAACC
GCTGGTTTTCATCCACGGATCTTTTCATTCTGCCTGGTGTTGGGCCGAGC
ATTTCCTTCCCTTTTTTGCAGCACGAGGATATGACAGCTACGCTATCTCC
TGTCGGGGCACCTTTCCTTCTCCGTCACCCAATCAAGAAGCAAGTATAAC
CATCAATACCCACGCGGCAGATCTGCGAGACTTTCTGAGGGTTGCCTTCC
CTCCTAGCGAGCAAGACACCCCTCAACCGATCCTCATTGGTCACTCGTTT
GGCGGAGCCATCCTCCTCAAACTGCTTGAGCAGCCCACCCCCTCGCCACT
GAGGGGCGTCGCTTTTCTGTGTTCCGTTCCTCCCTCTGGAAATGGTCCGA
TGACTGCTCGCTTTCTCAAGAGAGATTTCATCCTCGCGCTGAAAATCGTC
TTGGGCTTTGTGGCCAAGAAAGGGGCAGAGTGGGACTGGCTGTGTCAAGA
GCTCTTCTTCAGCCCCTCGCTTCCTCCTGACTTACTTCGAAAGTACAAAA
AGAGGCTGAAGAAGGACTCTGTGGTCGGCATCGATGTTAAGGATTTCCTC
AAGGAACTGCCGGTCTTGCGCGCGGACGGGGCGACAGGGCAGGGCCGATG
GGTGAAGGAAGTCCCGTCTCGTCTCGTGATCGGTAGGGGGGAGGATTGTC
TTGAATATTTGGAAAGAGGTCTCGTTACCCGGACACTCGACAGCTTGTTG
ATGGCATAAATGGGCAATCGCGCGTACGGGAGAGTTTTGCGCCGAAGAGA
AGCCATTTTTGCGACCAGGAACCTCCTATCCTCATGTCTCGTCGCCTTCT
TTCTTCTACGTTGCAACGATGGGAATGTTCAAGCGTTTCAAAGTGTAATA
CCTCTTAAATCTTCACGAGGCATCATACTTTCCGCTGCACCTCAAAGCTC
TGTACCTGCCCCAATCGGAGTCACCGCGGAGACGGTCACCTTCCCTAATA
CGGGGTTGTCCATGGAGGTCCTCAGCGCCAAATCACACTCCTCGTCCTCG
TCCGGTCCCGACAACATACTGGCAGCCTTGTCTTCATTTTTTTGGCCCAA
AGTCCGCCGTAAGCAACCGCTGGTTTTCATCCACGGATCTTTTCATTCTG
CCTGGTGTTGGGCCGAGCATTTCCTTCCCTTTTTTGCAGCACGAGGATAT
GACAGCTACGCTATCTCCTGTCGGGGCACCTTTCCTTCTCCGTCACCCAA
TCAAGAAGCAAGTATAACCATCAATACCCACGCGGCAGATCTGCGAGACT
TTCTGAGGGTTGCCTTCCCTCCTAGCGAGCAAGACACCCCTCAACCGATC
CTCATTGGTCACTCGTTTGGCGGAGCCATCCTCCTCAAACTGCTTGAGCA
GCCCACCCCCTCGCCACTGAGGGGCGTCGCTTTTCTGTGTTCCGTTCCTC
CCTCTGGAAATGGTCCGATGACTGCTCGCTTTCTCAAGAGAGATTTCATC
CTCGCGCTGAAAATCGTCTTGGGCTTTGTGGCCAAGAAAGGGGCAGAGTG
GGACTGGCTGTGTCAAGAGCTCTTCTTCAGCCCCTCGCTTCCTCCTGACT
TACTTCGAAAGTACAAAAAGAGGCTGAAGAAGGACTCTGTGGTCGGCATC
GATGTTAAGGATTTCCTCAAGGAACTGCCGGTCTTGCGCGCGGACGGGGC
GACAGGGCAGGGCCGATGGGTGAAGGAAGTCCCGTCTCGTCTCGTGATCG
GTAGGGGGGAGGATTGTCTTGAATATTTGGAAAGAGGTCTCGTTACCCGG
ACACTCGACAGCTTGTTGATGGCATAAATGGGCAATCGCGCGTACGGGAG
AGTTTTGCGCCGAAGAGAAGCCATTTTTGCGACCAG back to top
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