EWM30468.1, cds151 (CDS) Nannochloropsis gaditana

Overview
NameEWM30468.1
Unique Namecds151
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:393148..393206 -
Alignment locationCM002455.1:391938..392946 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30468.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100013g71.9756.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:393148..393206 -
CM002455.1supercontigCM002455.1:391938..392946 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR000073AB_hydrolase_1
Homology
BLAST of EWM30468.1 vs. NCBI_GenBank
Match: gi|585113132|gb|EWM30468.1| (hypothetical protein Naga_100013g71 [Nannochloropsis gaditana])

HSP 1 Score: 722.62 bits (1864), Expect = 0.000e+0
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0
Query:    1 MGNRAYGRVLRRREAIFATRNLLSSCLVAFFLLRCNDGNVQAFQSVIPLKSSRGIILSAAPQSSVPAPIGVTAETVTFPNTGLSMEVLSAKSHSSSSSGPDNILAALSSFFWPKVRRKQPLVFIHGSFHSAWCWAEHFLPFFAARGYDSYAISCRGTFPSPSPNQEASITINTHAADLRDFLRVAFPPSEQDTPQPILIGHSFGGAILLKLLEQPTPSPLRGVAFLCSVPPSGNGPMTARFLKRDFILALKIVLGFVAKKGAEWDWLCQELFFSPSLPPDLLRKYKKRLKKDSVVGIDVKDFLKELPVLRADGATGQGRWVKEVPSRLVIGRGEDCLEYLERGLVTRTLDSLLMA 355
            MGNRAYGRVLRRREAIFATRNLLSSCLVAFFLLRCNDGNVQAFQSVIPLKSSRGIILSAAPQSSVPAPIGVTAETVTFPNTGLSMEVLSAKSHSSSSSGPDNILAALSSFFWPKVRRKQPLVFIHGSFHSAWCWAEHFLPFFAARGYDSYAISCRGTFPSPSPNQEASITINTHAADLRDFLRVAFPPSEQDTPQPILIGHSFGGAILLKLLEQPTPSPLRGVAFLCSVPPSGNGPMTARFLKRDFILALKIVLGFVAKKGAEWDWLCQELFFSPSLPPDLLRKYKKRLKKDSVVGIDVKDFLKELPVLRADGATGQGRWVKEVPSRLVIGRGEDCLEYLERGLVTRTLDSLLMA
Sbjct:    1 MGNRAYGRVLRRREAIFATRNLLSSCLVAFFLLRCNDGNVQAFQSVIPLKSSRGIILSAAPQSSVPAPIGVTAETVTFPNTGLSMEVLSAKSHSSSSSGPDNILAALSSFFWPKVRRKQPLVFIHGSFHSAWCWAEHFLPFFAARGYDSYAISCRGTFPSPSPNQEASITINTHAADLRDFLRVAFPPSEQDTPQPILIGHSFGGAILLKLLEQPTPSPLRGVAFLCSVPPSGNGPMTARFLKRDFILALKIVLGFVAKKGAEWDWLCQELFFSPSLPPDLLRKYKKRLKKDSVVGIDVKDFLKELPVLRADGATGQGRWVKEVPSRLVIGRGEDCLEYLERGLVTRTLDSLLMA 355          
BLAST of EWM30468.1 vs. NCBI_GenBank
Match: gi|585113131|gb|EWM30467.1| (hypothetical protein Naga_100013g71 [Nannochloropsis gaditana])

HSP 1 Score: 676.396 bits (1744), Expect = 0.000e+0
Identity = 333/337 (98.81%), Postives = 333/337 (98.81%), Query Frame = 0
Query:    1 MGNRAYGRVLRRREAIFATRNLLSSCLVAFFLLRCNDGNVQAFQSVIPLKSSRGIILSAAPQSSVPAPIGVTAETVTFPNTGLSMEVLSAKSHSSSSSGPDNILAALSSFFWPKVRRKQPLVFIHGSFHSAWCWAEHFLPFFAARGYDSYAISCRGTFPSPSPNQEASITINTHAADLRDFLRVAFPPSEQDTPQPILIGHSFGGAILLKLLEQPTPSPLRGVAFLCSVPPSGNGPMTARFLKRDFILALKIVLGFVAKKGAEWDWLCQELFFSPSLPPDLLRKYKKRLKKDSVVGIDVKDFLKELPVLRADGATGQGRWVKEVPSRLVIGRGEDCL 337
            MGNRAYGRVLRRREAIFATRNLLSSCLVAFFLLRCNDGNVQAFQSVIPLKSSRGIILSAAPQSSVPAPIGVTAETVTFPNTGLSMEVLSAKSHSSSSSGPDNILAALSSFFWPKVRRKQPLVFIHGSFHSAWCWAEHFLPFFAARGYDSYAISCRGTFPSPSPNQEASITINTHAADLRDFLRVAFPPSEQDTPQPILIGHSFGGAILLKLLEQPTPSPLRGVAFLCSVPPSGNGPMTARFLKRDFILALKIVLGFVAKKGAEWDWLCQELFFSPSLPPDLLRKYKKRLKKDSVVGIDVKDFLKELPVLRADGATGQGRWVKEVPSRLVIG   D L
Sbjct:    1 MGNRAYGRVLRRREAIFATRNLLSSCLVAFFLLRCNDGNVQAFQSVIPLKSSRGIILSAAPQSSVPAPIGVTAETVTFPNTGLSMEVLSAKSHSSSSSGPDNILAALSSFFWPKVRRKQPLVFIHGSFHSAWCWAEHFLPFFAARGYDSYAISCRGTFPSPSPNQEASITINTHAADLRDFLRVAFPPSEQDTPQPILIGHSFGGAILLKLLEQPTPSPLRGVAFLCSVPPSGNGPMTARFLKRDFILALKIVLGFVAKKGAEWDWLCQELFFSPSLPPDLLRKYKKRLKKDSVVGIDVKDFLKELPVLRADGATGQGRWVKEVPSRLVIGAERDKL 337          
BLAST of EWM30468.1 vs. NCBI_GenBank
Match: gi|298705874|emb|CBJ29019.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 190.66 bits (483), Expect = 3.432e-54
Identity = 107/239 (44.77%), Postives = 143/239 (59.83%), Query Frame = 0
Query:  121 LVFIHGSFHSAWCWAEHFLPFFAARGYDSYAISCRGT----FPSPSPNQEA-SITINTHAADLRDFLRVAFPPSEQDTPQPILIGHSFGGAILLKLL---------------EQPTPSPLR----GVAFLCSVPPSGNGPMTARFLKRDFILALKIVLGFVAKKGAEWDWLCQELFFSPSLPPDLLRKYKKRLKKDSVVGIDVKDFLKELPVLRADGATGQGRWVKEVPSRLVIGRGED 335
            LVFIHGS+H+AWCWAEH++PF AA+GY++Y+IS RGT     P   P+ +   + I+ H  D+R F     P       +P+ + HSFGG +LLKLL               ++     +R    G AFLCSVPPSGNGPMT RF+K+  ++A+KIVLGFV K    W WL ++LFF  +L    L++Y  R K DS  G+D+ DF  +LP+  A+ A GQ  WV + P RLVIG   D
Sbjct:   55 LVFIHGSYHAAWCWAEHWMPFLAAKGYETYSISLRGTSGTLIPGAEPDAKGIKVKISDHVDDIRSFAETFLPGR-----RPVFVSHSFGGVVLLKLLEELATEGGQGEKENKDKEGADGIRPAVAGGAFLCSVPPSGNGPMTKRFIKQRPVMAVKIVLGFVLKMAVYWPWLARDLFFCQALEQSALKRYMSRFKADSKNGLDLMDFSGQLPMKMAN-ADGQATWVNQAPPRLVIGAERD 287          
BLAST of EWM30468.1 vs. NCBI_GenBank
Match: gi|873232238|emb|CEM05853.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 189.504 bits (480), Expect = 7.675e-54
Identity = 104/230 (45.22%), Postives = 137/230 (59.57%), Query Frame = 0
Query:  113 PKVR--RKQPLVFIHGSFHSAWCWAEHFLPFFAARGYDSYAISCRGTFPSPSPNQEA---SITINTHAADLRDFLRVAFPPSEQDTPQPILIGHSFGGAILLKLLEQPTPSPLRGVAFLCSVPPSGNGPMTARFLKRDFILALKIVLGFVAKKGAEWDWLCQELFFSPSLPPDLLRKYKKRLKKDSVVGIDVKDFLKELPVLRADGATGQGRWVKEVPSRLVIGRGEDCL 337
            P VR  RK PLVF+HGSFH AWCWAEH++P+F+  GY+  AI+ RGT  +P P  E    SI I  H  D+ D LR   P         +LIGHSFG   +LKLLEQ   SP +GVA  CSVPPSGNGPMT RF+ R  + A++IV GFV K+      L ++LFF   +P + +  Y+K    D  +G+DV+     LP  +A   +G+  W+ E   RLV+G  +D +
Sbjct:   52 PAVRDPRKPPLVFVHGSFHGAWCWAEHWMPYFSQLGYECIAINLRGTSGTPVPASEEEIRSIKIERHVEDVADLLRKTVPDG-----NVVLIGHSFGSMTILKLLEQGLVSP-KGVALACSVPPSGNGPMTVRFILRSVVDAVQIVRGFVFKQAMTSCALARQLFFDSDMPEEKVEAYRKLFCLDGQIGLDVRSLSGSLPSRQAL-PSGRASWLDESLPRLVMGTRQDYI 274          
BLAST of EWM30468.1 vs. NCBI_GenBank
Match: gi|1210521980|dbj|GAX19415.1| (hypothetical protein FisN_4Lh395 [Fistulifera solaris])

HSP 1 Score: 173.326 bits (438), Expect = 2.047e-47
Identity = 89/234 (38.03%), Postives = 131/234 (55.98%), Query Frame = 0
Query:  117 RKQPLVFIHGSFHSAWCWAEHFLPFFAARGYDSYAISCRGTFPSPSPNQEASITINTHAADLRDFLRVAFPPSEQDTPQPILIGHSFGGAILLKLLEQPTPSPLRGVAFLCSVPPSGNGPMTARFLKRDFILALKIVLGFVAKKGAEWDWLCQELFFSPSLPP-------------DLLRKYKKRLKKDSVVGIDVKDFLKELPVLRADGATGQGRWVKEVPSRLVIGRGEDCL 337
            +K P++F+HGSFH +WCW+EHF PFF  RG+   A++ RGT  + + +    + I  H ADL  FL    P       +PI++ HSFGG  ++K LEQ   S   G+  +CSVPPSGNG MT R+LKR  + + KI  GF  K+  + D LC+ELFF   +               D + +Y+    +DS   ID+ D  K+LP   +  + G+  +V ++P RLV+G  +D +
Sbjct:   72 KKPPILFLHGSFHGSWCWSEHFFPFFVERGFPVVALNWRGTGGTKAGDGVKKVKIMEHVADLSSFLEHVLPRLGYADVKPIVVCHSFGGLAVMKYLEQNPASKFSGIVMMCSVPPSGNGKMTMRYLKRSLMDSWKITAGFAMKRVLKNDVLCRELFFGGKIKTREDGSIEDYGITDDDIHRYQAYFARDSNATIDLFDLAKQLPS-SSTISDGRASFVAQLPPRLVMGATDDMV 304          
BLAST of EWM30468.1 vs. NCBI_GenBank
Match: gi|1210512557|dbj|GAX28414.1| (hypothetical protein FisN_4Hh395 [Fistulifera solaris])

HSP 1 Score: 169.088 bits (427), Expect = 9.166e-46
Identity = 89/237 (37.55%), Postives = 127/237 (53.59%), Query Frame = 0
Query:  114 KVRRKQPLVFIHGSFHSAWCWAEHFLPFFAARGYDSYAISCRGTFPSPSPNQEASITINTHAADLRDFLRVAFPPSEQDTPQPILIGHSFGGAILLKLLEQPTPSPLRGVAFLCSVPPSGNGPMTARFLKRDFILALKIVLGFVAKKGAEWDWLCQELFF-------------SPSLPPDLLRKYKKRLKKDSVVGIDVKDFLKELPVLRADGATGQGRWVKEVPSRLVIGRGEDCL 337
            K   K P++F+HGSFH +WCW+E F PFF  RG+   A++ RGT  + + +    + I  H ADL  FL    P       +P ++ HSFGG  ++K LEQ   S   G+  +CSVPPSGNG MT R+LKR  I + KI  GF  K+    D LC+ELFF                +P   + +Y+    +DS   ID+ D  K+LP   A  + G+  +V ++P  LV+G  +D +
Sbjct:   69 KWTNKPPILFLHGSFHGSWCWSERFFPFFVERGFPVVALNWRGTGGTKAGDGVTKVKITEHVADLNSFLEDVLPQLGYADVKPTVVCHSFGGLAVMKYLEQNPASKFSGIVMMCSVPPSGNGKMTMRYLKRSLIDSWKITAGFAMKRVLTNDVLCRELFFGGMIKAREDGSVEDYGIPDADVHRYQAYFARDSAATIDLLDLAKQLPS-SATTSDGRASFVAQLPPCLVMGATDDMV 304          
BLAST of EWM30468.1 vs. NCBI_GenBank
Match: gi|159481289|ref|XP_001698714.1| (esterase-like protein [Chlamydomonas reinhardtii] >gi|158273608|gb|EDO99396.1| esterase-like protein [Chlamydomonas reinhardtii])

HSP 1 Score: 161.77 bits (408), Expect = 3.420e-43
Identity = 93/199 (46.73%), Postives = 121/199 (60.80%), Query Frame = 0
Query:  120 PLVFIHGSFHSAWCWAEHFLPFFAARGYDSYAISCR---GTFPSPSPNQEASITINTHAADLRDFLRVAFPPSEQDTPQPILIGHSFGGAILLK-LLEQPTP-----------SPLRGVAFLCSVPPSGNGPMTARFLKRDFILALKIVLGFVAKKGAEWDWLCQELFFSPSLPPDLLRKYKKRLKKDSVVG-IDVKDF 302
            PL+F+HGS+H+AWCW E+F+P+FAARGYD+YA+S R   G+ P+P+    A  T++ HAADL   +  A   S      P+++GHSFGG I+ K +L    P           +PL G  FLCSVP SGN  M  RFL RD IL+LK+  GFVA+  A     C+ELFFS  +P D L KY+K L   S    ID+KD 
Sbjct:   65 PLLFVHGSYHAAWCWQENFMPYFAARGYDTYAVSLRAQGGSDPAPAGVSVAG-TLDVHAADLASLVP-AVAASSGGGAAPVMLGHSFGGLIVQKYVLGSAKPGTAASTAPGSFAPLSGAGFLCSVPQSGNKQMVTRFLFRDPILSLKLTWGFVARSFATSLTACRELFFSADIPADKLEKYQKLLAAASPTRLIDLKDM 261          
BLAST of EWM30468.1 vs. NCBI_GenBank
Match: gi|397620610|gb|EJK65805.1| (hypothetical protein THAOC_13300 [Thalassiosira oceanica])

HSP 1 Score: 164.851 bits (416), Expect = 1.629e-41
Identity = 102/277 (36.82%), Postives = 147/277 (53.07%), Query Frame = 0
Query:   86 EVLSAKSHSSSSSGPDNILAALSSFFWPKVRRKQPLVFIHGSFHSAWCWAEHFLPFFAARGYDSYAISCRGTFPSPSPNQEA-SITINTHAADLRDFLRVAFPPSEQDT---------PQPILIGHSFGGAILLKLLEQPTPSP------LRGVAFLCSVPPSGNGPMTARFLKRDFILALKIVLGFVAKKGAEWDWLCQELFF-----SPSLPPDLLRKYKKRLKKDSVVGIDVKDFLKELPVLRADGATGQGRWVKEVPSRLVIGRGEDCLEYLE 341
            EV+SA       S  +N LA+       +   K  LVFIHGSFH++WCW EH++P+FA++GY   A+S +GT  + +  + A  + I+ H  DL   LR     S+ D+         PQ +L+GHSFGG  ++K LE+   S       L GV  +CSVPPSGNGPMT R+L R    A  I  GFV K+       C+ELFF     +  +  D + +Y+   ++D+V  ID+    K LP   ADG TG+  +   +P  LV+   +D +  +E
Sbjct:   74 EVISAMPRREPKS-TENFLASFLGGGGSQSEEKPTLVFIHGSFHASWCWEEHYMPYFASQGYPCVALSLQGTGGTQTVEEGARKVKISCHTEDLDALLRGL---SDGDSSLGFGLGKNPQIVLLGHSFGGLTIMKWLEKFYESEKSQSINLAGVGLMCSVPPSGNGPMTMRYLWRSLSDAWAITAGFVLKRAIADKKNCRELFFGGDDDTNGIMDDDIERYQSYFERDTVATIDLSHLSKVLPSKFADGQTGEAPFADRLPPSLVLAASDDFIVDIE 346          
BLAST of EWM30468.1 vs. NCBI_GenBank
Match: gi|303271201|ref|XP_003054962.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226462936|gb|EEH60214.1| predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 157.147 bits (396), Expect = 1.667e-41
Identity = 92/233 (39.48%), Postives = 126/233 (54.08%), Query Frame = 0
Query:   80 NTGLSMEVLSAKSHSSSSSGPDNILAALSSFFWPKVRRKQPLVFIHGSFHSAWCWAEHFLPFFAARGYDSYAISCRGTFPSPSPNQEA-SITINTHAADLRDFLRVAFPPSEQDTPQPILIGHSFGGAILLKLLEQPTPSPLRGVAFLCSVPPSGNGPMTARFLKRDFILALKIVLGFVAKKGAEWDWLCQELFFSPSLPPDLLRKYKKRLKKDSVVG-IDVKDFLKELPVLR 310
              GL +E+LS K+   ++                    K P++F+HGS+H+AWCW  HF  +F+ARG+D YA+S RG   S  P+  A + T+  HAAD++D    AF       P PIL+GHSFGG +  +L     P PL G+A L SVPPSGNG M  RFLKR FI ++KI   F+A      + LC+E FFS  LP   L+ +   +     V  +D+K     LP+ R
Sbjct:   53 GAGLKLEILSQKAAGGAT--------------------KAPMLFVHGSYHAAWCWTVHFFDYFSARGHDCYAVSLRGQGGSDVPSGVAVAGTLEEHAADVKD--ACAFVSKASGAP-PILVGHSFGGLVCQRLFTG-EPPPLSGLALLASVPPSGNGEMVKRFLKRSFIASMKITYAFIAGAFKTNEKLCRECFFSDDLPDAELKTHMGSIATSCRVRLLDLKALNDSLPIPR 261          
BLAST of EWM30468.1 vs. NCBI_GenBank
Match: gi|901790413|gb|KMZ56148.1| (hypothetical protein ZOSMA_99G00790 [Zostera marina])

HSP 1 Score: 155.606 bits (392), Expect = 8.709e-41
Identity = 93/246 (37.80%), Postives = 131/246 (53.25%), Query Frame = 0
Query:   80 NTGLSMEVLSAKSHSSSSSGPDNILAALSSFFWPKVRRKQPLVFIHGSFHSAWCWAEHFLPFFAARGYDSYAISCRGTFPSPSPNQEASITINTHAADLRDFLRVAFPPSEQDTPQPILIGHSFGGAILLKLLEQPT----------------PSPLRGVAFLCSVPPSGNGPMTARFLKRDFILALKIVLGFVAKKGAEWDWLCQELFFSPSLPPDLLRKYKKRLKKDSVVGI-DVKDFLKELPV 308
            ++GLSME +  K       G D++  A             P+VF+HGSFH+AWCWAEH+LP+F+  GYD YA+S  G   S  PN + + T+ TH  D+ DF++      EQ    PILIGHSFGG I+   +   T                P  L G    CSVPPSGNG +  R+L    I A+K+ L   AK  A    LC+E FFSP++   L+++Y+  +K+ S V + ++++    LPV
Sbjct:   44 SSGLSMEAIVQK-------GDDSVGGA---------SHHSPIVFVHGSFHAAWCWAEHWLPYFSHAGYDCYAVSLLGQGESDLPNGKFAGTLETHTCDIADFIQ------EQVKNPPILIGHSFGGLIIQSYIANMTLQSSLHRFSHSGRRHSPPMLAGAVLACSVPPSGNGGLVWRYLMSKPIAAIKVTLSLAAKAFANSLPLCKETFFSPTMGDLLVQRYQDLMKESSRVPLFNLRELNASLPV 267          
The following BLAST results are available for this feature:
BLAST of EWM30468.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113132|gb|EWM30468.1|0.000e+0100.00hypothetical protein Naga_100013g71 [Nannochlorops... [more]
gi|585113131|gb|EWM30467.1|0.000e+098.81hypothetical protein Naga_100013g71 [Nannochlorops... [more]
gi|298705874|emb|CBJ29019.1|3.432e-5444.77conserved unknown protein [Ectocarpus siliculosus][more]
gi|873232238|emb|CEM05853.1|7.675e-5445.22unnamed protein product [Vitrella brassicaformis C... [more]
gi|1210521980|dbj|GAX19415.1|2.047e-4738.03hypothetical protein FisN_4Lh395 [Fistulifera sola... [more]
gi|1210512557|dbj|GAX28414.1|9.166e-4637.55hypothetical protein FisN_4Hh395 [Fistulifera sola... [more]
gi|159481289|ref|XP_001698714.1|3.420e-4346.73esterase-like protein [Chlamydomonas reinhardtii] ... [more]
gi|397620610|gb|EJK65805.1|1.629e-4136.82hypothetical protein THAOC_13300 [Thalassiosira oc... [more]
gi|303271201|ref|XP_003054962.1|1.667e-4139.48predicted protein [Micromonas pusilla CCMP1545] >g... [more]
gi|901790413|gb|KMZ56148.1|8.709e-4137.80hypothetical protein ZOSMA_99G00790 [Zostera marin... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna151rna151Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications