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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100007g85.6445.mrna |
| Orig protein id | gnl|cribi|Naga_100007g85.6445 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:775515..777027 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1496 ID=rna1496|Name=rna1496|organism=Nannochloropsis gaditana|type=mRNA|length=1673bp
ATGACCGCCAAACTTGGGCCTCTATGTCCAACTCACGACATACTTTTGGT
TACATTTGAGAGTGCGCTTGCTCGCTACGAAAGTTTTCCCCATGAATTTG
ACATATTTTCAATCCGGCGGAGATAGCCTTTGTCAGCCCTAAGCCCGAAT
TTTCTCGCACCACACTAGAAGTATCCTCACATTCTCCTTTTCGAATCACA
TGCATCAGCGGATCGTACAGGTGGGAAAGGAACGCCTGAAATCTGTACGA
AATAATGACGTCCACAGCAAGTTTGGCGTGCGGTGCTTGTACCGCAGCCG
TGTTAGTGTGTTTAACAACAGGAGATGGCGTCGCAACCCGGCACATAGAC
GCGAACGTGGGAAATCGGCGGACATCAGCTTTTTTGCCTGTTATGCCTCC
TATGGGAACTCCAGTCACTGGAAGAATACGGTCACATCCGCTTGAGGCCC
ACAAAATGTACTACGTATGTCAAGGCGGGACCCGGCTGTCTCAAAGGCGA
CACGAGCGTCTTGGGACCAGGACAGCAGTCATGGTGGTGAAGACGGACGT
GGAAATTTCTGACAAGCGTGATGTCGATCCAGAAGTGGGCAGCAGTTCAA
AGAGTACTGATCATACAGGGGTGTCTCGGTTTGGGTCCGCCATGCCTAAA
TCCGCGGAAGGCGTAGGACCACCCCCAGCCCCGCAGGATAACTTCAAGCA
CAAGAGCCTAGCCGGCGTTCCTACGGACTACGGGCCATACTTGACAATCA
AAGGTTTCAAGATAAACGCTTTTGGGTTCTTCTTCTGTTTCATGGCAATC
CTCTGGGCTATTCCGTGGGCGGTCTTCCTTGTCGTGTACAAGGCGCTCTT
GGAATTCGTGGACAAGCTCGACCCTTGTCGGTACAACGTGGACCGCAGCA
GTTCCTTGTGGGGTTGGCTTACCAGCCTCAGCACAGATTCTCTGCCCGAA
ATGACAGGTTTGGAGAACATACCCGATGGACCAGCGGTATTCGTTGCGAA
TCATGCGTCTTGGATGGACGTCCCCTACTCGGCACAGCTTCCTGTGCGAG
CAAAATATCTGGCAAAAGCTGACTTGACGAAGGTCCCAATCCTAGGCAAC
GCCATGAGCATGGCGCAGCACGTACTTGTGGATCGAGATGACAAACGCAG
TCAAATGGAGGCATTGCGATCGGCGCTCCTAATCCTCAAGACTGGCACAC
CGCTTTTCGTGTTTCCCGAAGGCACTCGCGGCCCAGGAGGGAAAATGCAG
GCCTTCAAGATGGGGGCCTTTAAAGTTGCAACCAAAGCTGGTGTACCTAT
CGTTCCTGTATCGATCGCAGGTACGCATATCATGATGCCAAAAGAGGTTA
TCATGCCTCAATGTGCCGGTCGTGGGATCACGGCAATCCACGTCCATCCA
GCCATACCATCGACGGACCGGACAGATCAGGAGCTTTCAGATTTAGCCTT
TAAAATCATAAACGACGCGTTGCCCAATGAGCAGCAATGCGAGTCCACCA
GTAAGGAGACTGGAGGTGCTTGATTGAGCACAAATAGTCAAAATTAAATG
TAATCATAAGGGAAGGATGTGATGAGGAAGAAGATGGTAATGCTGGTGCC
AAGCAGCCAGGTCACGTTCAAAAGCGGGAAAAGAAAATTAATTGACGAGT
TTAAGAATTAAATCCGCAGTAAG back to topprotein sequence of rna1496 >rna1496-protein ID=rna1496-protein|Name=rna1496|organism=Nannochloropsis gaditana|type=polypeptide|length=259bp
MPSSDTRKSRLPVVLRRSLIEGQIWKSNPAPHKRKCTIQGNFSREKTSKG
LPLSIKYYSIEESYLVQLVSSAVQRVRNHHQTASVDVWERRTQFATKSGG
HRVKPGSPVGARGAQEQGKLILASLRKELEEITWQIASRSRRALAASLKV
TGTTDRRTRTTIFKLLNDRSLAGRGSDRVGRCQSLSLEMSCISHDILDTS
EFPSWNKRTLTPCQKQNCLLAEDGLLISAVIRRQTTCGAMRRGSGMDSRL
SARHLSNAP back to topmRNA from alignment at CM002457.1:775515..777027- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1496 ID=rna1496|Name=rna1496|organism=Nannochloropsis gaditana|type=mRNA|length=1513bp|location=Sequence derived from alignment at CM002457.1:775515..777027- (Nannochloropsis gaditana)
ATGGTGTGTATGCACTCTTTTGCTCTTAACAACGGCGTGGACCTCTGTGG
AATGGCCGTAGAATAGAAAAGTGGTCTGGTCTGCACTCGGCCATTCGAAT
GGTGCCCTCTCACTTTCGCACTCGCGGCTGTCGGACTTTCGCTCTCACTG
GCGAGCTCGACGTTGCGCGGACGATGCCCTCGCCGGGAAGCCATCTGTAC
AGATCTTCTGTTCCTTTGTCCGAGCTCTGCTGCGGAATTCATCCGAGAAG
GTACAGAACTTCCCCAGGTTAGCTTATCCACCCCCAACGAGCACGCTGCT
GAATTCACTACGAGGGAGATGACCACCACTATCTTACAGTGGTAGCAGCG
GCAAGCCCAGGCCATGCCTCGCCGCAGAATATGTGCCAGGCTGGAGAGGT
GAAGAGGGAAGTGCCGAGGAAGAACTAAAGGGCCTGATCAACATTTCCAT
ACGAAACACAACTCGCCTTTGACAGCCATCCAGCGACACAAGGAAGAGCC
GCCTCCCGGTCGTTCTGAGGCGATCTCTCATTGAGGGCCAAATATGGAAA
TCCAACCCGGCACGTACGAGCAGCCTGGCGAATTGACGACTTCCCATAAA
TTGGAGTGTGAGCCTTTTCTCGTGTCGACCCGTAGCAAGCTCACAAGAGG
AAGTGTACAATACAAGGAAATTTTTCAAGGGAAAAGACCTCCAAAGGCCT
TCCCCTCTCGATAAAATATTATAGCATCGAAGAAAGCTATCTAGTCCAAC
TCGTCTCCTCCGCGGTGCAGAGGGTCCGCAACCATCACCAAACCGCTTCA
GTGTAGAACAGTTTGCAGCATTTGCAAGATTCCCACGTGATAGCTATGCG
GATGAGTAGCTACAAGCGACGTTTGGGAGCGAAGGACTCAATTCGCTACG
AAGTCTGGAGGACATCGAGTCAAGCCTGGATCACCCGTGGGAGCCCGGGG
AGCGCAAGAGCAGGGCAAGTTGATCCTTGCAAGCCTTCGCAAAGAGCTGG
AAGAGATTACGTGGCAAATTGCCTCGCGGAGTCGGAGAGCGTTAGCTGCT
TCATTGAAAGTCACCGGGACAACTGACCGACGAACAAGGACGACTATTTT
CAAGCTGCTCAATGACAGGAGTCTCGCTGGGCGAGGTTCCGACCGTGTTG
GCAGATGCCAATCGTTGTCCTTGGAGATGTCTTGCATATCCCACGACATC
CTCGACACGTCAGAATTTCCCTCCTGGAATAAGCGGACCTTGACCCCCTG
CCAAAAACAAAGTCTGGGTCACAGCCTTAGGACTTTTCAATCGATAGTGA
TTTGATATTTTTTCGACTGCATTTTTCCCGACTAGTTTCGGTTCGTGAAG
CAGCAGTCACTATCGATGGAAATCGATGGAAGATTGCCTGTTGGCCGAGG
ACGGCCTGCTTATTTCCGCGGTGATCCGTAGGCAGACGACCTGCGGAGCC
ATGCGACGAGGAAGTGGCATGGACTCTAGGTTGAGTGCAAGACACCTTTC
AAATGCGCCGTAA back to topCoding sequence (CDS) from alignment at CM002457.1:775515..777027- >rna1496 ID=rna1496|Name=rna1496|organism=Nannochloropsis gaditana|type=CDS|length=3900bp|location=Sequence derived from alignment at CM002457.1:775515..777027- (Nannochloropsis gaditana)
ATTGCCTGTTGGCCGAGGACGGCCTGCTTATTTCCGCGGTGATCCGTAGG
CAGACGACCTGCGGAGCCATGCGACGAGGAAGTGGCATGGACTCTAGGTT
GAGTGCAAGACACCTTTCAAATGCGCCGTAACGACGTTTGGGAGCGAAGG
ACTCAATTCGCTACGAAGTCTGGAGGACATCGAGTCAAGCCTGGATCACC
CGTGGGAGCCCGGGGAGCGCAAGAGCAGGGCAAGTTGATCCTTGCAAGCC
TTCGCAAAGAGCTGGAAGAGATTACGTGGCAAATTGCCTCGCGGAGTCGG
AGAGCGTTAGCTGCTTCATTGAAAGTCACCGGGACAACTGACCGACGAAC
AAGGACGACTATTTTCAAGCTGCTCAATGACAGGAGTCTCGCTGGGCGAG
GTTCCGACCGTGTTGGCAGATGCCAATCGTTGTCCTTGGAGATGTCTTGC
ATATCCCACGACATCCTCGACACGTCAGAATTTCCCTCCTGGAATAAGCG
GACCTTGACCCCCTGCCAAAAACAAACTCACAAGAGGAAGTGTACAATAC
AAGGAAATTTTTCAAGGGAAAAGACCTCCAAAGGCCTTCCCCTCTCGATA
AAATATTATAGCATCGAAGAAAGCTATCTAGTCCAACTCGTCTCCTCCGC
GGTGCAGAGGGTCCGCAACCATCACCAAACCGCTTCAGTCCATCCAGCGA
CACAAGGAAGAGCCGCCTCCCGGTCGTTCTGAGGCGATCTCTCATTGAGG
GCCAAATATGGAAATCCAACCCGGCACATGATTGCCTGTTGGCCGAGGAC
GGCCTGCTTATTTCCGCGGTGATCCGTAGGCAGACGACCTGCGGAGCCAT
GCGACGAGGAAGTGGCATGGACTCTAGGTTGAGTGCAAGACACCTTTCAA
ATGCGCCGTAACGACGTTTGGGAGCGAAGGACTCAATTCGCTACGAAGTC
TGGAGGACATCGAGTCAAGCCTGGATCACCCGTGGGAGCCCGGGGAGCGC
AAGAGCAGGGCAAGTTGATCCTTGCAAGCCTTCGCAAAGAGCTGGAAGAG
ATTACGTGGCAAATTGCCTCGCGGAGTCGGAGAGCGTTAGCTGCTTCATT
GAAAGTCACCGGGACAACTGACCGACGAACAAGGACGACTATTTTCAAGC
TGCTCAATGACAGGAGTCTCGCTGGGCGAGGTTCCGACCGTGTTGGCAGA
TGCCAATCGTTGTCCTTGGAGATGTCTTGCATATCCCACGACATCCTCGA
CACGTCAGAATTTCCCTCCTGGAATAAGCGGACCTTGACCCCCTGCCAAA
AACAAACTCACAAGAGGAAGTGTACAATACAAGGAAATTTTTCAAGGGAA
AAGACCTCCAAAGGCCTTCCCCTCTCGATAAAATATTATAGCATCGAAGA
AAGCTATCTAGTCCAACTCGTCTCCTCCGCGGTGCAGAGGGTCCGCAACC
ATCACCAAACCGCTTCAGTCCATCCAGCGACACAAGGAAGAGCCGCCTCC
CGGTCGTTCTGAGGCGATCTCTCATTGAGGGCCAAATATGGAAATCCAAC
CCGGCACATGATTGCCTGTTGGCCGAGGACGGCCTGCTTATTTCCGCGGT
GATCCGTAGGCAGACGACCTGCGGAGCCATGCGACGAGGAAGTGGCATGG
ACTCTAGGTTGAGTGCAAGACACCTTTCAAATGCGCCGTAACGACGTTTG
GGAGCGAAGGACTCAATTCGCTACGAAGTCTGGAGGACATCGAGTCAAGC
CTGGATCACCCGTGGGAGCCCGGGGAGCGCAAGAGCAGGGCAAGTTGATC
CTTGCAAGCCTTCGCAAAGAGCTGGAAGAGATTACGTGGCAAATTGCCTC
GCGGAGTCGGAGAGCGTTAGCTGCTTCATTGAAAGTCACCGGGACAACTG
ACCGACGAACAAGGACGACTATTTTCAAGCTGCTCAATGACAGGAGTCTC
GCTGGGCGAGGTTCCGACCGTGTTGGCAGATGCCAATCGTTGTCCTTGGA
GATGTCTTGCATATCCCACGACATCCTCGACACGTCAGAATTTCCCTCCT
GGAATAAGCGGACCTTGACCCCCTGCCAAAAACAAACTCACAAGAGGAAG
TGTACAATACAAGGAAATTTTTCAAGGGAAAAGACCTCCAAAGGCCTTCC
CCTCTCGATAAAATATTATAGCATCGAAGAAAGCTATCTAGTCCAACTCG
TCTCCTCCGCGGTGCAGAGGGTCCGCAACCATCACCAAACCGCTTCAGTC
CATCCAGCGACACAAGGAAGAGCCGCCTCCCGGTCGTTCTGAGGCGATCT
CTCATTGAGGGCCAAATATGGAAATCCAACCCGGCACATGATTGCCTGTT
GGCCGAGGACGGCCTGCTTATTTCCGCGGTGATCCGTAGGCAGACGACCT
GCGGAGCCATGCGACGAGGAAGTGGCATGGACTCTAGGTTGAGTGCAAGA
CACCTTTCAAATGCGCCGTAACGACGTTTGGGAGCGAAGGACTCAATTCG
CTACGAAGTCTGGAGGACATCGAGTCAAGCCTGGATCACCCGTGGGAGCC
CGGGGAGCGCAAGAGCAGGGCAAGTTGATCCTTGCAAGCCTTCGCAAAGA
GCTGGAAGAGATTACGTGGCAAATTGCCTCGCGGAGTCGGAGAGCGTTAG
CTGCTTCATTGAAAGTCACCGGGACAACTGACCGACGAACAAGGACGACT
ATTTTCAAGCTGCTCAATGACAGGAGTCTCGCTGGGCGAGGTTCCGACCG
TGTTGGCAGATGCCAATCGTTGTCCTTGGAGATGTCTTGCATATCCCACG
ACATCCTCGACACGTCAGAATTTCCCTCCTGGAATAAGCGGACCTTGACC
CCCTGCCAAAAACAAACTCACAAGAGGAAGTGTACAATACAAGGAAATTT
TTCAAGGGAAAAGACCTCCAAAGGCCTTCCCCTCTCGATAAAATATTATA
GCATCGAAGAAAGCTATCTAGTCCAACTCGTCTCCTCCGCGGTGCAGAGG
GTCCGCAACCATCACCAAACCGCTTCAGTCCATCCAGCGACACAAGGAAG
AGCCGCCTCCCGGTCGTTCTGAGGCGATCTCTCATTGAGGGCCAAATATG
GAAATCCAACCCGGCACATGATTGCCTGTTGGCCGAGGACGGCCTGCTTA
TTTCCGCGGTGATCCGTAGGCAGACGACCTGCGGAGCCATGCGACGAGGA
AGTGGCATGGACTCTAGGTTGAGTGCAAGACACCTTTCAAATGCGCCGTA
ACGACGTTTGGGAGCGAAGGACTCAATTCGCTACGAAGTCTGGAGGACAT
CGAGTCAAGCCTGGATCACCCGTGGGAGCCCGGGGAGCGCAAGAGCAGGG
CAAGTTGATCCTTGCAAGCCTTCGCAAAGAGCTGGAAGAGATTACGTGGC
AAATTGCCTCGCGGAGTCGGAGAGCGTTAGCTGCTTCATTGAAAGTCACC
GGGACAACTGACCGACGAACAAGGACGACTATTTTCAAGCTGCTCAATGA
CAGGAGTCTCGCTGGGCGAGGTTCCGACCGTGTTGGCAGATGCCAATCGT
TGTCCTTGGAGATGTCTTGCATATCCCACGACATCCTCGACACGTCAGAA
TTTCCCTCCTGGAATAAGCGGACCTTGACCCCCTGCCAAAAACAAACTCA
CAAGAGGAAGTGTACAATACAAGGAAATTTTTCAAGGGAAAAGACCTCCA
AAGGCCTTCCCCTCTCGATAAAATATTATAGCATCGAAGAAAGCTATCTA
GTCCAACTCGTCTCCTCCGCGGTGCAGAGGGTCCGCAACCATCACCAAAC
CGCTTCAGTCCATCCAGCGACACAAGGAAGAGCCGCCTCCCGGTCGTTCT
GAGGCGATCTCTCATTGAGGGCCAAATATGGAAATCCAACCCGGCACATG back to top
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