EWM29118.1, cds1493 (CDS) Nannochloropsis gaditana

Overview
NameEWM29118.1
Unique Namecds1493
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:777025..777027 -
Alignment locationCM002457.1:776465..776552 -
Alignment locationCM002457.1:776226..776388 -
Alignment locationCM002457.1:775767..776161 -
Alignment locationCM002457.1:775515..775645 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29118.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100007g85.6445.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:777025..777027 -
CM002457.1supercontigCM002457.1:776465..776552 -
CM002457.1supercontigCM002457.1:776226..776388 -
CM002457.1supercontigCM002457.1:775767..776161 -
CM002457.1supercontigCM002457.1:775515..775645 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM29118.1 vs. NCBI_GenBank
Match: gi|585111638|gb|EWM29118.1| (hypothetical protein Naga_100007g85 [Nannochloropsis gaditana])

HSP 1 Score: 529.635 bits (1363), Expect = 0.000e+0
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0 
Query:    1 MPSSDTRKSRLPVVLRRSLIEGQIWKSNPAPHKRKCTIQGNFSREKTSKGLPLSIKYYSIEESYLVQLVSSAVQRVRNHHQTASVDVWERRTQFATKSGGHRVKPGSPVGARGAQEQGKLILASLRKELEEITWQIASRSRRALAASLKVTGTTDRRTRTTIFKLLNDRSLAGRGSDRVGRCQSLSLEMSCISHDILDTSEFPSWNKRTLTPCQKQNCLLAEDGLLISAVIRRQTTCGAMRRGSGMDSRLSARHLSNAP 259
            MPSSDTRKSRLPVVLRRSLIEGQIWKSNPAPHKRKCTIQGNFSREKTSKGLPLSIKYYSIEESYLVQLVSSAVQRVRNHHQTASVDVWERRTQFATKSGGHRVKPGSPVGARGAQEQGKLILASLRKELEEITWQIASRSRRALAASLKVTGTTDRRTRTTIFKLLNDRSLAGRGSDRVGRCQSLSLEMSCISHDILDTSEFPSWNKRTLTPCQKQNCLLAEDGLLISAVIRRQTTCGAMRRGSGMDSRLSARHLSNAP
Sbjct:    1 MPSSDTRKSRLPVVLRRSLIEGQIWKSNPAPHKRKCTIQGNFSREKTSKGLPLSIKYYSIEESYLVQLVSSAVQRVRNHHQTASVDVWERRTQFATKSGGHRVKPGSPVGARGAQEQGKLILASLRKELEEITWQIASRSRRALAASLKVTGTTDRRTRTTIFKLLNDRSLAGRGSDRVGRCQSLSLEMSCISHDILDTSEFPSWNKRTLTPCQKQNCLLAEDGLLISAVIRRQTTCGAMRRGSGMDSRLSARHLSNAP 259
The following BLAST results are available for this feature:
BLAST of EWM29118.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111638|gb|EWM29118.1|0.000e+0100.00hypothetical protein Naga_100007g85 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1496rna1496Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications