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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100007g89.6452.mrna |
| Orig protein id | gnl|cribi|Naga_100007g89.6452 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:762843..765352 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1492 ID=rna1492|Name=rna1492|organism=Nannochloropsis gaditana|type=mRNA|length=1077bp
ATGCCTGCACCTGTAGGGGTCTTAGGCTTGAGCACAAGGACGTGCACGGA
AGCCCTCGAGTGCCTATTCAGATCCTCCATGCAACCATCTGCGTACTGCT
TTGGTTGTGACGGCCGTTCCAGTCGGAAGCTTGATTTGTGAGGTCCGATT
TGTGGGCTCTTTGAAAAAGACACCTTCCGATGGACGCCAAACGGGACAAG
GGCAAGTGCAGTACAGCCATGTTCTTGCCAGCATAGTGCAGTCAGGACTA
TCACTGTATTTCGGAAGTTCCGAGTGTCGGACGTTCAGCGCACTCTCGAC
ATCACATTGACAAATTACTCCATAATGCTCATCTTTGTCATCGCACATAG
AGACAGAGAACACAAAGCAGGGCATTTGGCAAACTTTGTCATCATGTCTG
ACGTTAATGCGCACATCATTCAGCCTCTGAAGAAATTTGCCAAAGACTCG
AGTCACTTGGTGAAGAAGTGCACGAAGCCGGACCGGAAAGAGTTTGCCCG
GATAGCTTACGCCACTAGCGTTGGATTTCTGATCATGGGCTTCATCGGCT
TCTTCGTCAAGCTTATCCACATCCCGATCAACAACATCCTTCTGGGCGGC
ATCTAGAAAAACCGGCCCGCCGCTCCTCATACATGCGTAGGAAATCCGAT
GGGTGAGAAGAAGACATGCCATTGTCTCCAAGGGCCATACATGCGCCTTG
GAAAGTGTGCGGTGAGAATCGTTTGAACAAACGAGAAGTAAACGGGTATG
AGGCTCGGAGAATGGAATGAAGTAACAAATATACCAGTTAAGCTTTGAAA
GTTTTGATCGCAAACAAACTGTTGCTTGGGGAACACAGACTGGTGCCCTT
CTTTCAGAGCATCCGGAAGGGACGCGCAGACAACCCAGAAGTTTTGCTCG
TGACTCGGTATTCTAACGTTTGTGCTTTTTAGATAGCTTTCTCGAAGCCT
CCTGGACACACCATGCTCTACTTTTGTATCGACAGTGTGCAGAAGAAAAT
CCTGTGTACAATCCATTCAGTCCTCACGCTCACATTTTGGCCGAGGATGA
TACTGTCTCTCCTCCTCCCGACAACTG back to topprotein sequence of rna1492 >rna1492-protein ID=rna1492-protein|Name=rna1492|organism=Nannochloropsis gaditana|type=polypeptide|length=506bp
MQVQTVSPSPTSIVMDYRKQLNSIEARLMNAPLHSGRSEDKSELLASQVG
HHHESSLPITLPVSQTKSSRMEAAVGASEDMECGITHEEQVVDELLQARE
TFMCQRWGDLLGQLKAGKSLGVTVRQEEERSYHFENKFQQEEHRLRGLFE
TAEGDIHGLVRATVEKHHEQARIRKEILERKKSVECLLNTLENIQGSLSL
GEEALSKLDEDEKAEEQDGQNQIRVMEAAIEDIRAKNCDARKRVSELQST
LEVLQTAALADGEEASSRADPALVEQEAEVLAEAGRLRGHAEDLQKVLET
LQGLYNVAVTVVDGSDAKPGEMVLRVGYPSQHALEVTLSTSDETVQLLHA
RLELPIVQQRRRSLATSEMQRLMMNQVDNLVTVAQGLTPPHDLLFLAREV
GWMVASRGVAKQEIRELMKRYIVKHNEAMDELTVTYAEGVVASFLLLEGY
PQMPGSVRIVGLVGVGGWKDTDLAITSRSLNGLGLESLTALVDALHERIA
ESDSKA back to topmRNA from alignment at CM002457.1:762843..765352+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1492 ID=rna1492|Name=rna1492|organism=Nannochloropsis gaditana|type=mRNA|length=2510bp|location=Sequence derived from alignment at CM002457.1:762843..765352+ (Nannochloropsis gaditana)
GGACAATACGCTTTTGATACTCGTGCCAGCTCCGGTATGTGGCAATGACC
GTGAGGGACCCCATACCCAGCAAGATACCGCGATGAATCATATCCCAGCT
CTTCATATTTCACCTGAATTGTGTGTAAAATATCTCAGTGGACATGCGTA
CCACGTACAGTTTAGTATGCGCTGGTAGGAACATGTGATTATGCTGAGCA
TACCGGGTAAAAGTCTCTTCTTAGCTTTTAAATTCAATAACCAGACGCAA
AAAAAGACCAGCTGTACGCAGTGACGCTTACTTATTGCCCTAGCTATCGA
GGGCGGACTGACACAATAAGTAGGAGATATACGATAGTGAAGCCGACTCA
GATGATTACGATAGCGCATCTAGACTCGAAGACCAAAAGGCTAAATATAG
TTGCTTCTTACTTACCTTACTACTAAATGATCTCTCGTCAGATCCCTATG
AAAATACGTGTGAAGCAGTCAATTTCTGGCCGTGGCGTGACTTTGTGGCG
TGACTTGATGGGAGGCGTGACGGCGGGAGTCGCTCGCCCTCACgagctct
ccctcgcttgcGTCTCCTACCTTAATTAGCCAGTGCGCCGCTCTCCCCCG
AACTAACCACAACACTTATTCAGGGGCAACAGAGAACATCCTGAGCATTC
ATGCAGGTGCAAACAGTGTCGCCAAGTCCAACCTCGATTGTAATGGACTA
CAGAAAGCAGCTAAATTCGATCGAAGCGCGCCTGATGAATGCGCCGTTGC
ATTCGGGGAGAAGTGAGGACAAGTCCGAATTGCTCGCATCCCAAGTAGGC
CATCATCATGAGTCCTCACTGCCGATAACGCTGCCTGTGTCGCAGACTAA
GTCCTCAAGGATGGAAGCGGCAGTTGGAGCGAGCGAAGACATGGAGTGCG
GCATCACACACGAGGAGCAAGTGGTCGATGAGTTGCTACAAGCTCGCGAG
ACATTCATGTGCCAACGTTGGGGGGACTTGCTTGGACAATTGAAAGCTGG
CAAATCTTTGGGAGTGACTGTaagacaagaggaagagcgctCGTATCACT
TTGAAAACAAGTTCCAGCAGGAGGAGCATCGCCTGCGAGGGCTTTTCGAG
ACAGCGGAAGGCGATATTCACGGCTTAGTGCGGGCAACCGTTGAAAAGCA
CCATGAACAGGCGCGTATTCGAAAAGAAATCCttgagaggaagaagagtg
TGGAATGTTTGTTAAACACATTGGAAAATATTCAAGGAAGTTTGTcattg
ggggaggaagctttgAGTAAgctggacgaggatgaaaaagcggaggagcA
AGACGGGCAAAATCAAATACGCGTTATGGAGGCAGCGATTGAAGACATCC
GAGCCAAGAATTGTGATGCGCGCAAGAGGGTGAGTGAGCTGCAAAGCACT
TTAGAGGTGCTTCAGACAGCTGCCTTGGCCGACGGCGAAGAGGCGAGCTC
GAGAGCGGATCCTGCACTAGTTGAGCAGGAGGCCGAGGTCCtcgcggagg
cagggagactTCGAGGACATGCCGAGGACTTGCAAAAGGTGTTGGAAACT
TTGCAAGGACTGTACAATGTTGCCGTCACGGTGGTGGACGGGTCCGATGC
AAAGCCGGGCGAGATGGTGCTTCGAGTCGGGTATCCCTCCCAGCACGCTT
TAGAGGTGACCCTCTCTACTTCAGACGAAACAGTCCAGCTCTTGCATGCC
CGTCTTGAGTTACCCATTGTACAACAGCGACGCAGATCGCTTGCTACTAG
TGAAATGCAGCGGCTGATGATGAACCAAGTGGACAATCTCGTTACTGTCG
CGCAGGGCCTGACCCCTCCACACGATCTTCTATTTTTGGCGCGCGAAGTT
GGATGGATGGTAGCATCGCGCGGAGTGGCTAAGCAGGAGATCCGTGAGCT
GATGAAAAGATACATTGTGAAGCACAACGAGGCGATGGACGAACTCACAG
TAACATATGCTGAAGGCGTCGTCGCCTCCTTTCTATTGTTGGAGGGCTAT
CCGCAGATGCCCGGGAGCGTTCGAATCGTTGGACTGGTGGGTGTTGGCGG
CTGGAAGGATACAGACTTGGCCATTACGAGTCGGAGTCTGAACGGCTTGG
GCCTGGAGTCGCTCACGGCCCTTGTCGACGCACTCCACGAGCGCATCGCA
GAATCAGATAGTAAGGCTTGAGAGATGCTCAAGATGGATGTAAGTTTGTC
ATGTTTCTGTACTGTATTGAACTGCATTTGAGCCTCTATACAAAGTACAA
TACAGAAGGCAAGAAGATCTGGACGGGACTGGCGAAAAAGTAAATGCAGG
AGAAGTAAAGGTGACGTGAGTGAGATTTGAGTGGAATGGCATCTGCCTGG
CAGGTCGCGAACTGAAGAATGCAAAGAAACGTGGACGAGACAAGACAAGA
CAATAGGCATGCAGTGGCTTTCTTCTTATCAATTGTTGCTCGCTCGGGCT
CCTCCGACAGGACCCGCCGTGCTCACGAGATCGGGCAGATTTGTATCTAT
TCGTAATATC back to topCoding sequence (CDS) from alignment at CM002457.1:762843..765352+ >rna1492 ID=rna1492|Name=rna1492|organism=Nannochloropsis gaditana|type=CDS|length=1521bp|location=Sequence derived from alignment at CM002457.1:762843..765352+ (Nannochloropsis gaditana)
ATGCAGGTGCAAACAGTGTCGCCAAGTCCAACCTCGATTGTAATGGACTA
CAGAAAGCAGCTAAATTCGATCGAAGCGCGCCTGATGAATGCGCCGTTGC
ATTCGGGGAGAAGTGAGGACAAGTCCGAATTGCTCGCATCCCAAGTAGGC
CATCATCATGAGTCCTCACTGCCGATAACGCTGCCTGTGTCGCAGACTAA
GTCCTCAAGGATGGAAGCGGCAGTTGGAGCGAGCGAAGACATGGAGTGCG
GCATCACACACGAGGAGCAAGTGGTCGATGAGTTGCTACAAGCTCGCGAG
ACATTCATGTGCCAACGTTGGGGGGACTTGCTTGGACAATTGAAAGCTGG
CAAATCTTTGGGAGTGACTGTaagacaagaggaagagcgctCGTATCACT
TTGAAAACAAGTTCCAGCAGGAGGAGCATCGCCTGCGAGGGCTTTTCGAG
ACAGCGGAAGGCGATATTCACGGCTTAGTGCGGGCAACCGTTGAAAAGCA
CCATGAACAGGCGCGTATTCGAAAAGAAATCCttgagaggaagaagagtg
TGGAATGTTTGTTAAACACATTGGAAAATATTCAAGGAAGTTTGTcattg
ggggaggaagctttgAGTAAgctggacgaggatgaaaaagcggaggagcA
AGACGGGCAAAATCAAATACGCGTTATGGAGGCAGCGATTGAAGACATCC
GAGCCAAGAATTGTGATGCGCGCAAGAGGGTGAGTGAGCTGCAAAGCACT
TTAGAGGTGCTTCAGACAGCTGCCTTGGCCGACGGCGAAGAGGCGAGCTC
GAGAGCGGATCCTGCACTAGTTGAGCAGGAGGCCGAGGTCCtcgcggagg
cagggagactTCGAGGACATGCCGAGGACTTGCAAAAGGTGTTGGAAACT
TTGCAAGGACTGTACAATGTTGCCGTCACGGTGGTGGACGGGTCCGATGC
AAAGCCGGGCGAGATGGTGCTTCGAGTCGGGTATCCCTCCCAGCACGCTT
TAGAGGTGACCCTCTCTACTTCAGACGAAACAGTCCAGCTCTTGCATGCC
CGTCTTGAGTTACCCATTGTACAACAGCGACGCAGATCGCTTGCTACTAG
TGAAATGCAGCGGCTGATGATGAACCAAGTGGACAATCTCGTTACTGTCG
CGCAGGGCCTGACCCCTCCACACGATCTTCTATTTTTGGCGCGCGAAGTT
GGATGGATGGTAGCATCGCGCGGAGTGGCTAAGCAGGAGATCCGTGAGCT
GATGAAAAGATACATTGTGAAGCACAACGAGGCGATGGACGAACTCACAG
TAACATATGCTGAAGGCGTCGTCGCCTCCTTTCTATTGTTGGAGGGCTAT
CCGCAGATGCCCGGGAGCGTTCGAATCGTTGGACTGGTGGGTGTTGGCGG
CTGGAAGGATACAGACTTGGCCATTACGAGTCGGAGTCTGAACGGCTTGG
GCCTGGAGTCGCTCACGGCCCTTGTCGACGCACTCCACGAGCGCATCGCA
GAATCAGATAGTAAGGCTTGA back to top
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