EWM29125.1, cds1489 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29125.1 vs. NCBI_GenBank
Match: gi|585111645|gb|EWM29125.1| (hypothetical protein Naga_100007g89 [Nannochloropsis gaditana]) HSP 1 Score: 1026.16 bits (2652), Expect = 0.000e+0 Identity = 506/506 (100.00%), Postives = 506/506 (100.00%), Query Frame = 0
Query: 1 MQVQTVSPSPTSIVMDYRKQLNSIEARLMNAPLHSGRSEDKSELLASQVGHHHESSLPITLPVSQTKSSRMEAAVGASEDMECGITHEEQVVDELLQARETFMCQRWGDLLGQLKAGKSLGVTVRQEEERSYHFENKFQQEEHRLRGLFETAEGDIHGLVRATVEKHHEQARIRKEILERKKSVECLLNTLENIQGSLSLGEEALSKLDEDEKAEEQDGQNQIRVMEAAIEDIRAKNCDARKRVSELQSTLEVLQTAALADGEEASSRADPALVEQEAEVLAEAGRLRGHAEDLQKVLETLQGLYNVAVTVVDGSDAKPGEMVLRVGYPSQHALEVTLSTSDETVQLLHARLELPIVQQRRRSLATSEMQRLMMNQVDNLVTVAQGLTPPHDLLFLAREVGWMVASRGVAKQEIRELMKRYIVKHNEAMDELTVTYAEGVVASFLLLEGYPQMPGSVRIVGLVGVGGWKDTDLAITSRSLNGLGLESLTALVDALHERIAESDSKA 506
MQVQTVSPSPTSIVMDYRKQLNSIEARLMNAPLHSGRSEDKSELLASQVGHHHESSLPITLPVSQTKSSRMEAAVGASEDMECGITHEEQVVDELLQARETFMCQRWGDLLGQLKAGKSLGVTVRQEEERSYHFENKFQQEEHRLRGLFETAEGDIHGLVRATVEKHHEQARIRKEILERKKSVECLLNTLENIQGSLSLGEEALSKLDEDEKAEEQDGQNQIRVMEAAIEDIRAKNCDARKRVSELQSTLEVLQTAALADGEEASSRADPALVEQEAEVLAEAGRLRGHAEDLQKVLETLQGLYNVAVTVVDGSDAKPGEMVLRVGYPSQHALEVTLSTSDETVQLLHARLELPIVQQRRRSLATSEMQRLMMNQVDNLVTVAQGLTPPHDLLFLAREVGWMVASRGVAKQEIRELMKRYIVKHNEAMDELTVTYAEGVVASFLLLEGYPQMPGSVRIVGLVGVGGWKDTDLAITSRSLNGLGLESLTALVDALHERIAESDSKA
Sbjct: 1 MQVQTVSPSPTSIVMDYRKQLNSIEARLMNAPLHSGRSEDKSELLASQVGHHHESSLPITLPVSQTKSSRMEAAVGASEDMECGITHEEQVVDELLQARETFMCQRWGDLLGQLKAGKSLGVTVRQEEERSYHFENKFQQEEHRLRGLFETAEGDIHGLVRATVEKHHEQARIRKEILERKKSVECLLNTLENIQGSLSLGEEALSKLDEDEKAEEQDGQNQIRVMEAAIEDIRAKNCDARKRVSELQSTLEVLQTAALADGEEASSRADPALVEQEAEVLAEAGRLRGHAEDLQKVLETLQGLYNVAVTVVDGSDAKPGEMVLRVGYPSQHALEVTLSTSDETVQLLHARLELPIVQQRRRSLATSEMQRLMMNQVDNLVTVAQGLTPPHDLLFLAREVGWMVASRGVAKQEIRELMKRYIVKHNEAMDELTVTYAEGVVASFLLLEGYPQMPGSVRIVGLVGVGGWKDTDLAITSRSLNGLGLESLTALVDALHERIAESDSKA 506
BLAST of EWM29125.1 vs. NCBI_GenBank
Match: gi|299471296|emb|CBN79122.1| (hypothetical protein Esi_0192_0025 [Ectocarpus siliculosus]) HSP 1 Score: 68.1662 bits (165), Expect = 1.454e-8 Identity = 48/181 (26.52%), Postives = 80/181 (44.20%), Query Frame = 0
Query: 322 MVLRVGYPSQHALEVTLSTSD---ETVQLLHARLELPIVQQRRRSLATSEMQRLMMNQVDNLVTVAQGLTPPHDLLFLAREVGWMVASRGVAKQEIRELMKRYIVKHNEAMDELTVTYAEGVVASFLLLEGYPQMPGSVRIVGLVGVGGWKDTDLAITSRSLNGLGLESLTALVDALHERI 499
M L V S +EVT+S +D + QL H + + + ++++ + A L P +L L E V ++ +R++ +RY+ + E+TVT G+VA F L YP++ G +V L GVGGW + R +N + L +L A +D L +
Sbjct: 331 MELMVSLGSGLTMEVTVSAADGKLSSAQLCHGQG----------GGGAASFAGISPSELEEMRRAADALPAPQNLGKLVIEALSRATCAAVREEHVRQVRRRYLTGYRPPSREVTVTMGAGIVACFRLAVDYPKVVGGAEVVALTGVGGWSAHETEQLCRRVNDMALPTLMATMDVLEAEV 501 The following BLAST results are available for this feature:
BLAST of EWM29125.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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