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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100007g112.6434.mrna |
Orig protein id | gnl|cribi|Naga_100007g112.6434 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002457.1 | supercontig | CM002457.1:713802..715383 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1469 ID=rna1469|Name=rna1469|organism=Nannochloropsis gaditana|type=mRNA|length=2814bp ATTGCACAACAAAAGCTTGTGGGGGAATTCGGGGCTTTCCTGTGTTCTTC CCTACTAGTAATATTCTCGTTGGCTCATGCACCGGGAGGGCCCGACAGAG CGGCCCCTCGCACACGCGACATTAAATAATCCTCTCCCTCTTTCATCGCA AATTCGACAGGATATGATCGCTTGACAGTATTCAGTAAAAAAGAAGTTAA GCATGCGAACCTCCCGCCCCAGAGAGTGCGATAACTACTGAGTAACGAGA CATAGCACCTTCCCGCGAATGCATTATTCGACTATGCGGCCGATCTTCTT GTGGATGAAAAAAATATACGCTAGGCCTTTGACTAAGCCATTGACACCAA TCAGAAGCGCTACTGTTGAGTGTTCTGTCGGCTTTTCTACCTGCTCCATG ACCCCCGAAACTCGTCAACTCGCCGAGGGTGTCCTTCGAGGAAATCGGTT AGCTTTAAGTAGAGCGATTACTTTGATAGAGTCCACGAAGGAGAGTCATC GACTCGATGCTGAGGCATTGTTGGACCACGTTGTTTACGAGCGGAGCCGT CGAGTCCGAGAAAAGGGACGACTCAAACCGGGGAATTCCACGAGCAACGC AGCCTGTGTCGCTGATGAGGGTAGAATCGGCACGTCTGAAAATGTTCGAC CCTTGCGAGTCGGAATTGCTGGGCCGCCAGGTGCTGGGAAATCGACTTTT ATAGAGGCCCTAGGCAAATACCTGACGGATAGTAAGAAATTGCGTGTCGC TGTCATCGCAGTGGATCCGTCATCAAGCCGCAGCGGGGGTTCCATTCTGG GAGATAAAACTCGTATGTACGAGTTGGCGAAAGACCCGAAGGCATTTGTG CGTGCTTGCCCAACCAGTGGGGTTCTGGGTGGCGTGGCGCGCTACACGAA TGATGTAGTCCTGCTTTGTCAAGCCGCATCTTTTGACATAGTTTTCATTG AGAGCGTGGGGCTCGGCCAATCCGAAACTATAATCGACCAGGCATCGGAC ATGCTTCTTCTCCTTGTTCCTCCTGCGGGCGGGGACGAATTGCAGGGCGT GAAGAAGGGAATCATGGAGGTTGCGGACGTCATAGTCGTTAACAAAGCGG ACGGCCATCTTCTCACGGCTGCTCAGCACACAGCTGCAGCGTATCAGCAC GCCCTTTGCTTTCAACGGCGCAAATGGGACGCTTGGATGCCGAGTGTGAC CCTCTGCTCGGCTTTGGAGCGTCATCGCATCGCAGACGTATGGGAGCAGG TGTGTTCATGTAGTGACGTTTTCAGGCGGTCCGGATATCTCCGCTTAAAG CGACAGAATCAGGATAAATATTGGGTCTGGAATAGTTTAGAGGACATTCT CGTGCGACGAGCGAGAACATCCTCGAAAATAAAAGCCGGTGTGGAGCGGA TGGAAAAAGAATTGGGGAAAGGGACCCTGACCCCCCGATCCGCAGCCGAG ATCCTTCTCGCGGATTTCTTCGAAGAGCAGAAGTCTCCGACGAAAAGTAT GGCGCCGTTCCAACAGTCAACATCATGCTTTCGTCCATCTTCTTCTGATT AATATCTTACGTCCCATATTCAAGTACGATTTGCGCCGCTAAACTCACGC AAAAAATTCAAGTAATGATTGTCATCTATTTTGCGGCCGTGACTAACTTC AGCTCTTGTCGCCCCAGATCTGGTGTTTCTAGAACACCGAGAAAACTGGA TTTACTCATCAAACTCTCTGAGCTCCTTCGATCCGATCCACTGAAAAACA CCACTCTTCTTTGCTCCACTTCTTCCTTACAGAAGATCATCATCGCTGTA GCAGGCGAAGGGCGGGTCACCTGGCAGCATGCCCGTGTCTCGGTATGTGC CGGCGTAGCGCTCATTTGCGCCCCTTTCGTCATGAAACCAATTCGTTTCT TCAATGCTCTGCAGCACATCTTCTCCCTCCACTGCGTCTTCACGCAGTCC TGAAGTAAATTCAACCGTGGCTAAACTACCATCTTTGCTACAACGAATCG CCCGTGATCTCTTGTCATTGTCTTTTACCCCCGGACTCCCAGCTCCCCCC TGCTGCGTATTAATGTCGTCTTCCTTGCCATTGCTGGCATGAGTGGGAGC CAAGCCTTTCTGTTCGCTGGTTTGTTCTGAGAAGGGACTTGGCGTCTCGC CAAAGGGAGCCCGTTCCGGAGAACTCCCTCCTATGAGTACGTCGGATACC ACGGCTGAAGGCGATGCTGCAGATGAAGATGGCATAGATGGAACAATAAT TGTGCCATGCGGATCAAAGTCGTGCAGGCGCCGCCGCCATGCACGCACCA GGCCATTGAAACGCTTGGTACTGATTCGGGCATGAATGTCCGGTGTTCTT GGATCTGTACGTCGTCGGAGTTCCTTTGGAATTATCTCCTTATAACGGTC GTATCCCAAGGTATTCTTGCCATAGTCGATCTGTTTCTGTCGCTGCCGCA ATCGATGAGGGTCAGTCTCCGCCTCGCCTTGTCCTGACACTCCCGCCTGT GGTGTTATGGTATTCCTTCGGTCTCTCAAGGCTGTACTGTTGACCTCAGG GGTTGTCCCTATTAAGCAACTGGGTAGGCGTGGCTTTGTCTTCGTTGAAC GGCAATCATCAGCCTCATAACGAAATCTCTTGCTCGTGGGGCGCTTTAAT AAAGACGAGAAAAAAGGGTTAGAGAAAATAAAGCAAGGTAACGTGTCCGA GGAGCAGTCTTCCTGTCCTTTCCGTACCTGCCGAAAGCTGTCCATTTCTT TGCGATAATAGTGCACTTTCCCTAGCCTTTTGTAGGTGTGGGGAGTGATG TGACTGCTTCGACC back to topprotein sequence of rna1469 >rna1469-protein ID=rna1469-protein|Name=rna1469|organism=Nannochloropsis gaditana|type=polypeptide|length=323bp MFDKRTGRSSHITPHTYKRLGKVHYYRKEMDSFRQRPTSKRFRYEADDCR STKTKPRLPSCLIGTTPEVNSTALRDRRNTITPQAGVSGQGEAETDPHRL RQRQKQIDYGKNTLGYDRYKEIIPKELRRRTDPRTPDIHARISTKRFNGL VRAWRRRLHDFDPHGTIIVPSMPSSSAASPSAVVSDVLIGGSSPERAPFG ETPSPFSEQTSEQKGLAPTHASNGKEDDINTQQGGAGSPGVKDNDKRSRA IRCSKDGSLATVEFTSGLREDAVEGEDVLQSIEETNWFHDERGANERYAG TYRDTGMLPGDPPFACYSDDDLL back to topmRNA from alignment at CM002457.1:713802..715383- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1469 ID=rna1469|Name=rna1469|organism=Nannochloropsis gaditana|type=mRNA|length=1582bp|location=Sequence derived from alignment at CM002457.1:713802..715383- (Nannochloropsis gaditana) ATGTTTGACAAACGTACTGGTCGAAGCAGTCACATCACTCCCCACACCTA
CAAAAGGCTAGGGAAAGTGCACTATTATCGCAAAGAAATGGACAGCTTTC
GGCAGGTACGGAAAGGACAGGAAGACTGCTCCTCGGACACGTTACCTTGC
TTTATTTTCTCTAACCCTTTTTTCTCGTCTTTATTAAAGCGCCCCACGAG
CAAGAGATTTCGTTATGAGGCTGATGATTGCCGTTCAACGAAGACAAAGC
CACGCCTACCCAGTTGCTTAATAGGGACAACCCCTGAGGTCAACAGTACA
GCCTTGAGAGACCGAAGGAATACCATAACACCACAGGCGGGAGTGTCAGG
ACAAGGCGAGGCGGAGACTGACCCTCATCGATTGCGGCAGCGACAGAAAC
AGATCGACTATGGCAAGAATACCTTGGGATACGACCGTTATAAGGAGATA
ATTCCAAAGGAACTCCGACGACGTACAGATCCAAGAACACCGGACATTCA
TGCCCGAATCAGTACCAAGCGTTTCAATGGCCTGGTGCGTGCATGGCGGC
GGCGCCTGCACGACTTTGATCCGCATGGCACAATTATTGTTCCATCTATG
CCATCTTCATCTGCAGCATCGCCTTCAGCCGTGGTATCCGACGTACTCAT
AGGAGGGAGTTCTCCGGAACGGGCTCCCTTTGGCGAGACGCCAAGTCCCT
TCTCAGAACAAACCAGCGAACAGAAAGGCTTGGCTCCCACTCATGCCAGC
AATGGCAAGGAAGACGACATTAATACGCAGCAGGGGGGAGCTGGGAGTCC
GGGGGTAAAAGACAATGACAAGAGATCACGGGCGATTCGTTGTAGCAAAG
ATGGTAGTTTAGCCACGGTTGAATTTACTTCAGGACTGCGTGAAGACGCA
GTGGAGGGAGAAGATGTGCTGCAGAGCATTGAAGAAACGAATTGGTTTCA
TGACGAAAGGGGCGCAAATGAGCGCTACGCCGGCACATACCGAGACACGG
GCATGCTGCCAGGTGACCCGCCCTTCGCCTGCTACAGCGATGATGATCTT
CTGTAAGGAAGAAGTGGAGCAAAGAAGAGTGGTGTTTTTCAGTGGATCGG
ATCGAAGGAGCTCAGAGAGTTTGATGAGTAAATCCAGTTTTCTCGGTGTT
CTAGAAACACCAGATCTGGGGCGACAAGAGCTGAAGTTAGTCACGGCCGC
AAAATAGATGACAATCATTACTTGAATTTTTTGCGTGAGTTTAGCGGCGC
AAATCGTACTTGAATATGGGACGTAAGATATTAATCAGAAGAAGATGGAC
GAAAGCATGATGTTGACTGTTGGAACGGCGCCATACTTTTCGTCGGAGAC
TTCTGCTCTTCGAAGAAATCCGCGAGAAGGATCTCGGCTGCGGATCGGGG
GGTCAGGGTCCCTTTCCCCAATTCTTTTTCCATCCGCTCCACACCGGCTT
TTATTTTCGAGGATGTTCTCGCTCGTCGCACGAGAATGTCCTCTAAACTA
TTCCAGACCCAATATTTATCCTGATTCTGTCGCTTTAAGCGGAGATATCC
GGACCGCCTGAAAACGTCACTACATGAACACA back to topCoding sequence (CDS) from alignment at CM002457.1:713802..715383- >rna1469 ID=rna1469|Name=rna1469|organism=Nannochloropsis gaditana|type=CDS|length=1944bp|location=Sequence derived from alignment at CM002457.1:713802..715383- (Nannochloropsis gaditana) CGCCCCACGAGCAAGAGATTTCGTTATGAGGCTGATGATTGCCGTTCAAC GAAGACAAAGCCACGCCTACCCAGTTGCTTAATAGGGACAACCCCTGAGG TCAACAGTACAGCCTTGAGAGACCGAAGGAATACCATAACACCACAGGCG GGAGTGTCAGGACAAGGCGAGGCGGAGACTGACCCTCATCGATTGCGGCA GCGACAGAAACAGATCGACTATGGCAAGAATACCTTGGGATACGACCGTT ATAAGGAGATAATTCCAAAGGAACTCCGACGACGTACAGATCCAAGAACA CCGGACATTCATGCCCGAATCAGTACCAAGCGTTTCAATGGCCTGGTGCG TGCATGGCGGCGGCGCCTGCACGACTTTGATCCGCATGGCACAATTATTG TTCCATCTATGCCATCTTCATCTGCAGCATCGCCTTCAGCCGTGGTATCC GACGTACTCATAGGAGGGAGTTCTCCGGAACGGGCTCCCTTTGGCGAGAC GCCAAGTCCCTTCTCAGAACAAACCAGCGAACAGAAAGGCTTGGCTCCCA CTCATGCCAGCAATGGCAAGGAAGACGACATTAATACGCAGCAGGGGGGA GCTGGGAGTCCGGGGGTAAAAGACAATGACAAGAGATCACGGGCGATTCG TTGTAGCAAAGATGGTAGTTTAGCCACGGTTGAATTTACTTCAGGACTGC GTGAAGACGCAGTGGAGGGAGAAGATGTGCTGCAGAGCATTGAAGAAACG AATTGGTTTCATGACGAAAGGGGCGCAAATGAGCGCTACGCCGGCACATA CCGAGACACGGGCATGCTGCCAGGTGACCCGCCCTTCGCCTGCTACAGCG ATGATGATCTTCTGTAAATGTTTGACAAACGTACTGGTCGAAGCAGTCAC ATCACTCCCCACACCTACAAAAGGCTAGGGAAAGTGCACTATTATCGCAA AGAAATGGACAGCTTTCGGCAGCGCCCCACGAGCAAGAGATTTCGTTATG AGGCTGATGATTGCCGTTCAACGAAGACAAAGCCACGCCTACCCAGTTGC TTAATAGGGACAACCCCTGAGGTCAACAGTACAGCCTTGAGAGACCGAAG GAATACCATAACACCACAGGCGGGAGTGTCAGGACAAGGCGAGGCGGAGA CTGACCCTCATCGATTGCGGCAGCGACAGAAACAGATCGACTATGGCAAG AATACCTTGGGATACGACCGTTATAAGGAGATAATTCCAAAGGAACTCCG ACGACGTACAGATCCAAGAACACCGGACATTCATGCCCGAATCAGTACCA AGCGTTTCAATGGCCTGGTGCGTGCATGGCGGCGGCGCCTGCACGACTTT GATCCGCATGGCACAATTATTGTTCCATCTATGCCATCTTCATCTGCAGC ATCGCCTTCAGCCGTGGTATCCGACGTACTCATAGGAGGGAGTTCTCCGG AACGGGCTCCCTTTGGCGAGACGCCAAGTCCCTTCTCAGAACAAACCAGC GAACAGAAAGGCTTGGCTCCCACTCATGCCAGCAATGGCAAGGAAGACGA CATTAATACGCAGCAGGGGGGAGCTGGGAGTCCGGGGGTAAAAGACAATG ACAAGAGATCACGGGCGATTCGTTGTAGCAAAGATGGTAGTTTAGCCACG GTTGAATTTACTTCAGGACTGCGTGAAGACGCAGTGGAGGGAGAAGATGT GCTGCAGAGCATTGAAGAAACGAATTGGTTTCATGACGAAAGGGGCGCAA ATGAGCGCTACGCCGGCACATACCGAGACACGGGCATGCTGCCAGGTGAC CCGCCCTTCGCCTGCTACAGCGATGATGATCTTCTGTAAATGTTTGACAA ACGTACTGGTCGAAGCAGTCACATCACTCCCCACACCTACAAAAGGCTAG GGAAAGTGCACTATTATCGCAAAGAAATGGACAGCTTTCGGCAG back to top
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