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Properties
| Property Name | Value |
|---|
| Product | Epsin-like protein |
| Orig transcript id | gnl|cribi|Naga_100203g3.2708.mrna |
| Orig protein id | gnl|cribi|Naga_100203g3.2708 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:665033..667250 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1452 ID=rna1452|Name=rna1452|organism=Nannochloropsis gaditana|type=mRNA|length=1555bp
AGTGCACGGCGACCGAGCCTAGCGATCACGGCCTGATTGTCCTTCTAGTT
CGGAGACGTCTTACAGGGGCAAAGCACAATCGTCGCCATTAGATCCAGCC
AAACTCTGGCACTAGACAAGCGTGGTTGCTCCTCTCGCCTGGAGAGGTCT
GGCAATGGGTATACGTAGTGCTGGACGAGCAAAAGGGGGAAGACGACGAG
TATCATACATCAACAACCTCCCCTACCTGCCGCCGAGACTCAGACCCCTC
CTTGATCACGGTCAGGCATGTCTTCAATCCAGGGGAAACGTTGCGATGAC
TGCAATCAAACATATGATACGAGAGATAGACTATGTCCGATTTGCGGGGC
TGCATTCCCCAATCCTGTAGCGCCAGCCAGCGCCCACGCCCCACTCCTCC
GTCTCCAATCGGAACAAGCAAATGAGCCTTCATCATCACACGCATTTCAA
GGAGAAATCACAACGCATCTTGCAGAGCGCCTAAGAATTTTGCTCCTGCA
AGGTGGGTGGATTGGGGAATCGGATGCTTTTGGCGGGGACATAGATCTGG
AAAGACTTTTGTCGAGAGGAGATGGACTCGGCGGAGGGAACGGCTTAAGC
GACGAAGACATTGACAGGCTGCCGCGTTCACAGTTACACAGCACCAGTTC
TATGCTCATATCAGTAACCCTCACTTTGGAATCGGATGAGGTTGAGTCAG
ATATTACGATGGAATGCATACCAGGATCGTTTTCGCCCATACCTCCTGAT
GGTGCGCTTATAGATTTAGTGCCGACAGTGCCGTTGACGGCGGACGCTTT
GCCTTTGCGGCATCGGTCTACGTACCGCGATAAGGTGCTTGTGATGCAAA
GGGGAAAGCAGACGTTCGGAGCAATGCTTCGGGCAGCAAGGGAGGTTGAG
GCGCGAGGCGTTGTAGTGGTGAACTCCTTACCGCTTTGGCCTTATCTGAT
GCGGGACGGGCGGGGCGAGGCGCGTCTGGTAGAGCATCTGTCCGCGCGCG
GCGGGGAGCAGAAAGCGGCCTCCTGCTTCATAGTCATGGTCTCCCAGGGG
CACGGACAGGAGCTTCTCCGGCGACTGGACGCCGGGAGAGCGACAGAGGA
GACCCCTGGTAAGCCCTTGGCGGCTCGACTGGCAGCGTCCAGGGTGGAAA
GGGAGTGTCTGATCTGCATCTGCTCCTTCGCCGAGGGGGAGACGATCCTA
CGACTGCCGTGCCAGCACAGCTACCACGCCGACTGTGCTAGGAAGTGGCT
AGCCCTTCAGAAGACTTGCCCTGCATGTCGCACGCAAATCAAGACGCGGC
GTAATAGCTAAAGCATTCGACATGGATACATTCGAGAATAACCCGAGCGT
CGAGCGGGGGGTTTCTTAGGAAAAGTCTTTCCAACCCACGTTGATGCCCT
GATGCCAACGTTTTAAAATAATAATTTCAATTTTGTTCTTTTTATTCGTT
CCAATCTGTTTGAAACGGCGCTGCGGCTTTGCGATTCTTTGTAATGCGGT
CCTTACAGGCCTCCTTTTCAAAGCGTGTTGCTCTCGTTTCCCCCTCGGCG
TCAGG back to topprotein sequence of rna1452 >rna1452-protein ID=rna1452-protein|Name=rna1452|organism=Nannochloropsis gaditana|type=polypeptide|length=645bp
MAGVLRCIFLALALLLVIFINEAKKVGTSRSSGGMPGRAKPAKKAASARR
SSKSTFSTPGARRRQPSVEIYREEEAEDEEDFEDDFLAPPTRRSTGTRGK
KRPDFGKRAMGASHKSRRVYMDEKEDGFHGMAEEDDYEEDIYEDDEGGDE
YGGELDGREYMKARGARGRKAARYGRSRSRGREMRGPAPRSRYGRGKKGK
ALAYKPSGYGVAREPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFS
GDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTL
RKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVCAKMSREGCK
KSRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTF
TSKFEEMKVIGQREIDAKDLVGQLGKAEKVLSSGLECALGEAEEDADSEV
TLMCAELVARDVYDLFRLFHEKLRWAIDNQAAAFEGADRSEVAKILERFQ
ASYARLYPQVQQFLTQTAQLLGVYGIKLRTKLEPAHRFEEEAVAVGEMVE
GGEDIVEGEVVGTATGDTATEAAEGAGEEGGGTASEVEASADARGPVSGR
VQRREEEEEEEEEEEEEEEEEEEEENDDDDDDDDEDEEEEDEEEE back to topmRNA from alignment at CM002457.1:665033..667250- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1452 ID=rna1452|Name=rna1452|organism=Nannochloropsis gaditana|type=mRNA|length=2218bp|location=Sequence derived from alignment at CM002457.1:665033..667250- (Nannochloropsis gaditana)
ATGGCAGGTGTGCTGCGATGCATTTTTCTGGCTTTGGCGCTGCTGTTGGT
AATTTTCATCAATGAAGCCAAGAAAGTGGGGACCTCGCGCAGCAGCGGCG
GCATGCCCGGTCGTGCCAAGCCTGCCAAAAAAGCTGCGAGGTAAGCATAC
ACAACACTGCGTCGCACTTGGGCACATTTTCTCTCCATATAAGGATAAGG
CGTCTTTCCAGGAGAAAGTGGCTGTAAGACGTACATGAAGACGAGGGTGG
AGTGACCTCATCTTGCGGGAATCGGGATCCTTCCGCTTTGATTGACGTTG
ATGTGACACTTATGGAGCTCTTACAACATGATAAAATTGCTTGGTAAATG
TCTGTCTTGGCTCTCTATCTTTTTATATCCATGCAAAGCCGCGATCTAAC
CCGAAATCATGCTTTATCAGCGCCAGGAGATCGAGCAAATCTACTTTCTC
CACCCCGGGGGCACGGAGACGGCAGCCTTCCGTCGAGATCTACCGGGAAG
AGGAGGCAGAGGATGAAGAAGACTTTGAAGACGACTTCTTGGCTCCACCG
ACGCGACGAAGTACTGGCACGCGAGGGAAGAAAAGGCCCGACTTCGGGAA
ACGAGCCATGGGAGCGAGCCATAAGTCGCGTCGTGTCTATATGGACGAGA
AGGAAGACGGGTTCCACGGCATGGCGGAAGAGGATGATTATGAGGAGGAT
ATTTACGAGGACGATGAGGGTGGTGACGAATACGGTGGGGAGCTAGATGG
GCGCGAATACATGAAGGCGAGAGGCGCCCGAGGGCGGAAGGCGGCCCGCT
ACGGGCGCTCGAGGTCGCGAGGGAGAGAAATGCGTGGCCCAGCCCCGAGG
TCGAGGTATGGCAGAGGCAAGAAGGGCAAGGCGCTGGCGTACAAGCCTTC
CGGCTACGGGGTGGCGCGGGAGCCGCTGCAGGCGCGGATGATGCGGAACG
TGTTCTTCTTGACGGAGAAGGTGCAGGGCATGGCGAGCAAGGGGAAGAAG
ATGACCAGAGAGCTGAAAGAGTACTTTAGCGGGGACTTTGAAAGCATGCT
GCTCAAGGCAACACGGCCGGACGATGCCCGCCCGCCTCCCGAGTTCATCG
GCGCCATCCTGGACGCGACCGCCACCTTCCATCGGGACGAGGACCTGACT
GCGGGCAGCAACCCCTACCGAGTCACGCTGCGAAAGCTGTGGGCGAAGAT
GGCGGAGAGGGATTGGCGCACCGTGGCCAAGGCCCTGTACCTCTTCCACG
TCCTCCTCCGCGAATGCGAGCCCGACGATGTGCGCATTTACAAGAAGGTG
TGCGCCAAGATGAGCCGGGAGGGGTGCAAGAAGTCCCGGTCCCGGTACTT
CGACGCGGGGGCGATCAGCGCCGTGGACGTGATGGACGGGGCGGGGGTGG
GGGGGGCGGGGGCCTGTCTGGACCGACGCGACTTCATCGCCCGCTACAGC
AAGTACGTGCTCCAGCGGGCGAAGACCTTCACCTCCAAATTCGAGGAGAT
GAAGGTGATAGGGCAGCGGGAGATCGACGCCAAGGACCTTGTGGGGCAGC
TTGGCAAGGCCGAGAAGGTGCTGAGCTCGGGGCTGGAGTGCGCGCTGGGC
GAGGCAGAGGAGGATGCGGACAGCGAGGTCACGCTCATGTGTGCGGAGCT
GGTGGCCCGCGACGTGTACGACCTCTTCCGGCTCTTCCACGAGAAGCTCC
GGTGGGCGATCGACAACCAGGCGGCGGCCTTCGAGGGCGCGGACAGGTCG
GAGGTGGCGAAGATCCTGGAGCGCTTTCAGGCGTCCTACGCTCGCCTGTA
CCCGCAGGTGCAGCAGTTCCTGACACAGACGGCGCAGCTGCTGGGCGTCT
ACGGGATCAAGCTCCGCACAAAGCTTGAGCCGGCCCACCGCTTTGAGGAG
GAGGCAGTGGCCGTGGGCGAGATGGTGGAGGGAGGAGAAGACATCGTGGA
AGGAGAGGTGGTGGGAACAGCCACGGGTGACACGGCAACGGAGGCGGCCG
AGGGAGCGGGGGAGGAGGGAGGCGGGACAGCTTCAGAAGTAGAAGCAAGT
GCGGATGCCAGGGGACCGGTGAGTGGGCGCGTCCAAAGGAGAGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGAATGATGATGATGATGACGACGATGATGAGGATGAAGAAGAGGAA
GACGAGGAGGAGGAATAA back to topCoding sequence (CDS) from alignment at CM002457.1:665033..667250- >rna1452 ID=rna1452|Name=rna1452|organism=Nannochloropsis gaditana|type=CDS|length=3876bp|location=Sequence derived from alignment at CM002457.1:665033..667250- (Nannochloropsis gaditana)
CGCCAGGAGATCGAGCAAATCTACTTTCTCCACCCCGGGGGCACGGAGAC
GGCAGCCTTCCGTCGAGATCTACCGGGAAGAGGAGGCAGAGGATGAAGAA
GACTTTGAAGACGACTTCTTGGCTCCACCGACGCGACGAAGTACTGGCAC
GCGAGGGAAGAAAAGGCCCGACTTCGGGAAACGAGCCATGGGAGCGAGCC
ATAAGTCGCGTCGTGTCTATATGGACGAGAAGGAAGACGGGTTCCACGGC
ATGGCGGAAGAGGATGATTATGAGGAGGATATTTACGAGGACGATGAGGG
TGGTGACGAATACGGTGGGGAGCTAGATGGGCGCGAATACATGAAGGCGA
GAGGCGCCCGAGGGCGGAAGGCGGCCCGCTACGGGCGCTCGAGGTCGCGA
GGGAGAGAAATGCGTGGCCCAGCCCCGAGGTCGAGGTATGGCAGAGGCAA
GAAGGGCAAGGCGCTGGCGTACAAGCCTTCCGGCTACGGGGTGGCGCGGG
AGCCGCTGCAGGCGCGGATGATGCGGAACGTGTTCTTCTTGACGGAGAAG
GTGCAGGGCATGGCGAGCAAGGGGAAGAAGATGACCAGAGAGCTGAAAGA
GTACTTTAGCGGGGACTTTGAAAGCATGCTGCTCAAGGCAACACGGCCGG
ACGATGCCCGCCCGCCTCCCGAGTTCATCGGCGCCATCCTGGACGCGACC
GCCACCTTCCATCGGGACGAGGACCTGACTGCGGGCAGCAACCCCTACCG
AGTCACGCTGCGAAAGCTGTGGGCGAAGATGGCGGAGAGGGATTGGCGCA
CCGTGGCCAAGGCCCTGTACCTCTTCCACGTCCTCCTCCGCGAATGCGAG
CCCGACGATGTGCGCATTTACAAGAAGGTGTGCGCCAAGATGAGCCGGGA
GGGGTGCAAGAAGTCCCGGTCCCGGTACTTCGACGCGGGGGCGATCAGCG
CCGTGGACGTGATGGACGGGGCGGGGGTGGGGGGGGCGGGGGCCTGTCTG
GACCGACGCGACTTCATCGCCCGCTACAGCAAGTACGTGCTCCAGCGGGC
GAAGACCTTCACCTCCAAATTCGAGGAGATGAAGGTGATAGGGCAGCGGG
AGATCGACGCCAAGGACCTTGTGGGGCAGCTTGGCAAGGCCGAGAAGGTG
CTGAGCTCGGGGCTGGAGTGCGCGCTGGGCGAGGCAGAGGAGGATGCGGA
CAGCGAGGTCACGCTCATGTGTGCGGAGCTGGTGGCCCGCGACGTGTACG
ACCTCTTCCGGCTCTTCCACGAGAAGCTCCGGTGGGCGATCGACAACCAG
GCGGCGGCCTTCGAGGGCGCGGACAGGTCGGAGGTGGCGAAGATCCTGGA
GCGCTTTCAGGCGTCCTACGCTCGCCTGTACCCGCAGGTGCAGCAGTTCC
TGACACAGACGGCGCAGCTGCTGGGCGTCTACGGGATCAAGCTCCGCACA
AAGCTTGAGCCGGCCCACCGCTTTGAGGAGGAGGCAGTGGCCGTGGGCGA
GATGGTGGAGGGAGGAGAAGACATCGTGGAAGGAGAGGTGGTGGGAACAG
CCACGGGTGACACGGCAACGGAGGCGGCCGAGGGAGCGGGGGAGGAGGGA
GGCGGGACAGCTTCAGAAGTAGAAGCAAGTGCGGATGCCAGGGGACCGGT
GAGTGGGCGCGTCCAAAGGAGAGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAATGATGATGATGAT
GACGACGATGATGAGGATGAAGAAGAGGAAGACGAGGAGGAGGAATAAAT
GGCAGGTGTGCTGCGATGCATTTTTCTGGCTTTGGCGCTGCTGTTGGTAA
TTTTCATCAATGAAGCCAAGAAAGTGGGGACCTCGCGCAGCAGCGGCGGC
ATGCCCGGTCGTGCCAAGCCTGCCAAAAAAGCTGCGAGCGCCAGGAGATC
GAGCAAATCTACTTTCTCCACCCCGGGGGCACGGAGACGGCAGCCTTCCG
TCGAGATCTACCGGGAAGAGGAGGCAGAGGATGAAGAAGACTTTGAAGAC
GACTTCTTGGCTCCACCGACGCGACGAAGTACTGGCACGCGAGGGAAGAA
AAGGCCCGACTTCGGGAAACGAGCCATGGGAGCGAGCCATAAGTCGCGTC
GTGTCTATATGGACGAGAAGGAAGACGGGTTCCACGGCATGGCGGAAGAG
GATGATTATGAGGAGGATATTTACGAGGACGATGAGGGTGGTGACGAATA
CGGTGGGGAGCTAGATGGGCGCGAATACATGAAGGCGAGAGGCGCCCGAG
GGCGGAAGGCGGCCCGCTACGGGCGCTCGAGGTCGCGAGGGAGAGAAATG
CGTGGCCCAGCCCCGAGGTCGAGGTATGGCAGAGGCAAGAAGGGCAAGGC
GCTGGCGTACAAGCCTTCCGGCTACGGGGTGGCGCGGGAGCCGCTGCAGG
CGCGGATGATGCGGAACGTGTTCTTCTTGACGGAGAAGGTGCAGGGCATG
GCGAGCAAGGGGAAGAAGATGACCAGAGAGCTGAAAGAGTACTTTAGCGG
GGACTTTGAAAGCATGCTGCTCAAGGCAACACGGCCGGACGATGCCCGCC
CGCCTCCCGAGTTCATCGGCGCCATCCTGGACGCGACCGCCACCTTCCAT
CGGGACGAGGACCTGACTGCGGGCAGCAACCCCTACCGAGTCACGCTGCG
AAAGCTGTGGGCGAAGATGGCGGAGAGGGATTGGCGCACCGTGGCCAAGG
CCCTGTACCTCTTCCACGTCCTCCTCCGCGAATGCGAGCCCGACGATGTG
CGCATTTACAAGAAGGTGTGCGCCAAGATGAGCCGGGAGGGGTGCAAGAA
GTCCCGGTCCCGGTACTTCGACGCGGGGGCGATCAGCGCCGTGGACGTGA
TGGACGGGGCGGGGGTGGGGGGGGCGGGGGCCTGTCTGGACCGACGCGAC
TTCATCGCCCGCTACAGCAAGTACGTGCTCCAGCGGGCGAAGACCTTCAC
CTCCAAATTCGAGGAGATGAAGGTGATAGGGCAGCGGGAGATCGACGCCA
AGGACCTTGTGGGGCAGCTTGGCAAGGCCGAGAAGGTGCTGAGCTCGGGG
CTGGAGTGCGCGCTGGGCGAGGCAGAGGAGGATGCGGACAGCGAGGTCAC
GCTCATGTGTGCGGAGCTGGTGGCCCGCGACGTGTACGACCTCTTCCGGC
TCTTCCACGAGAAGCTCCGGTGGGCGATCGACAACCAGGCGGCGGCCTTC
GAGGGCGCGGACAGGTCGGAGGTGGCGAAGATCCTGGAGCGCTTTCAGGC
GTCCTACGCTCGCCTGTACCCGCAGGTGCAGCAGTTCCTGACACAGACGG
CGCAGCTGCTGGGCGTCTACGGGATCAAGCTCCGCACAAAGCTTGAGCCG
GCCCACCGCTTTGAGGAGGAGGCAGTGGCCGTGGGCGAGATGGTGGAGGG
AGGAGAAGACATCGTGGAAGGAGAGGTGGTGGGAACAGCCACGGGTGACA
CGGCAACGGAGGCGGCCGAGGGAGCGGGGGAGGAGGGAGGCGGGACAGCT
TCAGAAGTAGAAGCAAGTGCGGATGCCAGGGGACCGGTGAGTGGGCGCGT
CCAAAGGAGAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGAATGATGATGATGATGACGACGATGAT
GAGGATGAAGAAGAGGAAGACGAGGAGGAGGAATAAATGGCAGGTGTGCT
GCGATGCATTTTTCTGGCTTTGGCGCTGCTGTTGGTAATTTTCATCAATG
AAGCCAAGAAAGTGGGGACCTCGCGCAGCAGCGGCGGCATGCCCGGTCGT
GCCAAGCCTGCCAAAAAAGCTGCGAG back to top
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