EWM29224.1, cds1449 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29224.1 vs. NCBI_GenBank
Match: gi|585111745|gb|EWM29224.1| (Epsin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1290.02 bits (3337), Expect = 0.000e+0 Identity = 645/645 (100.00%), Postives = 645/645 (100.00%), Query Frame = 0
Query: 1 MAGVLRCIFLALALLLVIFINEAKKVGTSRSSGGMPGRAKPAKKAASARRSSKSTFSTPGARRRQPSVEIYREEEAEDEEDFEDDFLAPPTRRSTGTRGKKRPDFGKRAMGASHKSRRVYMDEKEDGFHGMAEEDDYEEDIYEDDEGGDEYGGELDGREYMKARGARGRKAARYGRSRSRGREMRGPAPRSRYGRGKKGKALAYKPSGYGVAREPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVCAKMSREGCKKSRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMKVIGQREIDAKDLVGQLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLFRLFHEKLRWAIDNQAAAFEGADRSEVAKILERFQASYARLYPQVQQFLTQTAQLLGVYGIKLRTKLEPAHRFEEEAVAVGEMVEGGEDIVEGEVVGTATGDTATEAAEGAGEEGGGTASEVEASADARGPVSGRVQRREEEEEEEEEEEEEEEEEEEEENDDDDDDDDEDEEEEDEEEE 645
MAGVLRCIFLALALLLVIFINEAKKVGTSRSSGGMPGRAKPAKKAASARRSSKSTFSTPGARRRQPSVEIYREEEAEDEEDFEDDFLAPPTRRSTGTRGKKRPDFGKRAMGASHKSRRVYMDEKEDGFHGMAEEDDYEEDIYEDDEGGDEYGGELDGREYMKARGARGRKAARYGRSRSRGREMRGPAPRSRYGRGKKGKALAYKPSGYGVAREPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVCAKMSREGCKKSRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMKVIGQREIDAKDLVGQLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLFRLFHEKLRWAIDNQAAAFEGADRSEVAKILERFQASYARLYPQVQQFLTQTAQLLGVYGIKLRTKLEPAHRFEEEAVAVGEMVEGGEDIVEGEVVGTATGDTATEAAEGAGEEGGGTASEVEASADARGPVSGRVQRREEEEEEEEEEEEEEEEEEEEENDDDDDDDDEDEEEEDEEEE
Sbjct: 1 MAGVLRCIFLALALLLVIFINEAKKVGTSRSSGGMPGRAKPAKKAASARRSSKSTFSTPGARRRQPSVEIYREEEAEDEEDFEDDFLAPPTRRSTGTRGKKRPDFGKRAMGASHKSRRVYMDEKEDGFHGMAEEDDYEEDIYEDDEGGDEYGGELDGREYMKARGARGRKAARYGRSRSRGREMRGPAPRSRYGRGKKGKALAYKPSGYGVAREPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVCAKMSREGCKKSRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMKVIGQREIDAKDLVGQLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLFRLFHEKLRWAIDNQAAAFEGADRSEVAKILERFQASYARLYPQVQQFLTQTAQLLGVYGIKLRTKLEPAHRFEEEAVAVGEMVEGGEDIVEGEVVGTATGDTATEAAEGAGEEGGGTASEVEASADARGPVSGRVQRREEEEEEEEEEEEEEEEEEEEENDDDDDDDDEDEEEEDEEEE 645
BLAST of EWM29224.1 vs. NCBI_GenBank
Match: gi|553185485|ref|XP_005854255.1| (c2h2 zinc-finger protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294806|gb|EKU22106.1| c2h2 zinc-finger protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1198.73 bits (3100), Expect = 0.000e+0 Identity = 594/596 (99.66%), Postives = 595/596 (99.83%), Query Frame = 0
Query: 1 MAGVLRCIFLALALLLVIFINEAKKVGTSRSSGGMPGRAKPAKKAASARRSSKSTFSTPGARRRQPSVEIYREEEAEDEEDFEDDFLAPPTRRSTGTRGKKRPDFGKRAMGASHKSRRVYMDEKEDGFHGMAEEDDYEEDIYEDDEGGDEYGGELDGREYMKARGARGRKAARYGRSRSRGREMRGPAPRSRYGRGKKGKALAYKPSGYGVAREPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVCAKMSREGCKKSRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMKVIGQREIDAKDLVGQLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLFRLFHEKLRWAIDNQAAAFEGADRSEVAKILERFQASYARLYPQVQQFLTQTAQLLGVYGIKLRTKLEPAHRFEEEAVAVGEMVEGGEDIVEGEVVGTATGDTATEAAEGAGEEGGGTASEVEASADARGP 596
MAGVLRCIFLALALLLVIFINEAKKVGTSRSSGGMPGRAKPAKKAASARRSSKSTFSTPGARRRQPSVEIYREEEAEDEEDFEDDFLAPPTRRSTGTRGKKRPDFGKRAMGASHKSRRVYMDEKEDGFHGMAEED+YEEDIYEDDEGGDEYGGELDGREYMKARGARGRKAARYGRSRSRGREMRGPAPRSRYGRGKKGKALAYKPSGYGVAREPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKV AKMSREGCKKSRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMKVIGQREIDAKDLVGQLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLFRLFHEKLRWAIDNQAAAFEGADRSEVAKILERFQASYARLYPQVQQFLTQTAQLLGVYGIKLRTKLEPAHRFEEEAVAVGEMVEGGEDIVEGEVVGTATGDTATEAAEGAGEEGGGTASEVEASADARGP
Sbjct: 1 MAGVLRCIFLALALLLVIFINEAKKVGTSRSSGGMPGRAKPAKKAASARRSSKSTFSTPGARRRQPSVEIYREEEAEDEEDFEDDFLAPPTRRSTGTRGKKRPDFGKRAMGASHKSRRVYMDEKEDGFHGMAEEDNYEEDIYEDDEGGDEYGGELDGREYMKARGARGRKAARYGRSRSRGREMRGPAPRSRYGRGKKGKALAYKPSGYGVAREPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVFAKMSREGCKKSRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMKVIGQREIDAKDLVGQLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLFRLFHEKLRWAIDNQAAAFEGADRSEVAKILERFQASYARLYPQVQQFLTQTAQLLGVYGIKLRTKLEPAHRFEEEAVAVGEMVEGGEDIVEGEVVGTATGDTATEAAEGAGEEGGGTASEVEASADARGP 596
BLAST of EWM29224.1 vs. NCBI_GenBank
Match: gi|553185481|ref|XP_005854254.1| (c2h2 zinc-finger protein [Nannochloropsis gaditana CCMP526] >gi|422294805|gb|EKU22105.1| c2h2 zinc-finger protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 368.622 bits (945), Expect = 4.564e-113 Identity = 173/174 (99.43%), Postives = 173/174 (99.43%), Query Frame = 0
Query: 184 MRGPAPRSRYGRGKKGKALAYKPSGYGVAREPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVCAKMSREGCKKSRSRYF 357
MRGPAPRSRYGRGKKGKALAYKPSGYGVAREPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKV AKMSREGCKKSRSRYF
Sbjct: 1 MRGPAPRSRYGRGKKGKALAYKPSGYGVAREPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVFAKMSREGCKKSRSRYF 174
BLAST of EWM29224.1 vs. NCBI_GenBank
Match: gi|298714853|emb|CBJ25752.1| (weakly similar Glutamic acid-rich protein precursor [Ectocarpus siliculosus]) HSP 1 Score: 217.624 bits (553), Expect = 1.531e-57 Identity = 149/430 (34.65%), Postives = 221/430 (51.40%), Query Frame = 0
Query: 136 DYEEDIYED----DEGGDEYGGELDGREYMKARGARGRKAARYGRSRSR------------GREMRGPAPRSRYGRGKKGKALAYK------PSGYGVA-REPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVCAKMSREGCKKSRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMKVIGQREIDAKDLVGQLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLFRLFHEKLRWAID--NQAAAFEGADRSEVAKILERFQASYARLYPQVQQFLTQTAQLLGVYGIKLR-TKLEPAHRFE 539
DY + +ED EGGDE+ E + + +GR + R + R GR G SRY RG++ A + P+ G A L+ +M + + AS +K+ RE+K SG +ES LLK T PDD P + +++DA TF +D D+T S +RV LRKLWAKM+E DWRTV+KA+YLFH +LR+ + I K AKMSRE KK+ RYFD +DV+ V G R F+ RY YV +RA+ F ++F+E+ + QRE +++V L KA+K + G+ C + + + ++E+T++C A D++ L+R FH L W ++ F+GAD + V + L F+ Y Y V FL +LLG+YG+ + L AH F+
Sbjct: 122 DYSQGEHEDGGWSSEGGDEHSWEDNYDDDDVLASPKGRNSRAPSRRQPRPSAWTGDGAGGSGRRRSGARGSSRYQRGRRPAAPTTRGFAVRMPAVSGAAIASALRQKMGTAAEAVGQAGSLAASTSQKLKREVKLVVSGSWESALLKVTWPDDLPPDETLVLSMVDAVKTFKKDRDVTKNSAEHRVLLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLAKMSREWDKKTACRYFD------LDVL--CRVSEEGEAF--RSFVDRYGTYVFKRAEGFNARFQELDTM-QREEGWENVVTTLAKAQKAIDLGVSC---QPQPEEETELTVLCLRNTALDLHQLWRRFHSSLDWVLEEAEDGDLFDGADSAMVEECLNDFKGFYMTRYDDVLTFLLDAEELLGIYGLHVPDLSLPAAHGFD 537
BLAST of EWM29224.1 vs. NCBI_GenBank
Match: gi|299115562|emb|CBN75765.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 120.553 bits (301), Expect = 8.457e-25 Identity = 96/320 (30.00%), Postives = 156/320 (48.75%), Query Frame = 0
Query: 214 EPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDAT----ATFHRDEDLTAGS---NPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVCAKMSREGCKKSRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMKVIGQREIDAKDLVGQLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLFRLFHEKLRWAIDNQAAAFEGADRS--EVAKILERFQASYARLYPQVQQFLTQTAQLLGVY 524
E L+A++ L K+ G+ KG K+ RELK S D E L+KATRPD+ + + +L A + +D + PY +TL KLW +MAERD+RT +KA+Y+ H L R + ++ +M R+ K ++SRYF IS VD DG +++ Y+++VL R ++F+ + E+ I E + L KA K++ + L C +G D D++VT +LV D+ +++ LF +KL + + F G S E+ + L F Y Q + ++ +LL +Y
Sbjct: 264 ERLKAKLADAQVGLKTKMTGVTHKGAKVMRELKGSISSDLEKTLIKATRPDNDPAKRKHVNLLLQAAEHAFPVYMNPKDGGQAAWKEGPYWMTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDEDKGTKSRYFSRRVISNVDD-DGRPFS---------EWLDAYAEFVLLRLQSFSPELGELAAI-DAETPHEKASRSLEKAAKLIEAALACEIG---PDLDNDVTCDGLKLVIEDLCEVWSLFQQKLEIRLQQR---FTGGGFSSGELRRTLS-FLEFYLEQLSAAQGLVQESHRLLALY 565
BLAST of EWM29224.1 vs. NCBI_GenBank
Match: gi|1210512322|dbj|GAX28591.1| (hypothetical protein FisN_1Hh618 [Fistulifera solaris]) HSP 1 Score: 108.997 bits (271), Expect = 3.036e-21 Identity = 108/381 (28.35%), Postives = 172/381 (45.14%), Query Frame = 0
Query: 178 RSRGREMRGPA---PRSRYGRGKKGKALAY-KPSGYGVA-REPLQARMMRNVFFLTEKVQGMA----SKGKKMT--------RELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVCAKMSREGCKKSRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMKVIGQ-------REIDAKDL-VGQLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLFRLFHEKLRWAIDNQAAAFEGADRSEVAKILERFQASYAR-LYPQVQQFLTQTAQLLGVYGIKLRTKL 532
R R + RGP P GR K+G + Y KP G A + L A +RN V+ A S +K T RE+K + S + E ++LKAT+PDD + + ++ T D+ Y LRKLW KM E+DWRT KA+Y+ H + P+ K ++ R K + ++F+ + A D + R F++RYS YVL R + + F+E+ V + + I + L V QL A +L +GL C L + EE E T + E V D+ L L A+ + +GAD + IL+++ + Y++ L PQ + + +T+ L +G+ L +++
Sbjct: 138 RPRPKSSRGPPSRRPHPSGGRPKQGSLVRYSKPQGAATAFTKGLAA--IRNSMPDPSSVKDAALSSISTARKATSSISANLYREVKGFTSSELEQVMLKATKPDDTPVKGKHVERLVGVTYQIGPKFDI------YDAVLRKLWGKMVEKDWRTTMKAVYIMHRFSADGAPEHAAALKARLRELRRTRDPKRKDKFFNTKQLLAGDT--------TPENVKFRAFLSRYSHYVLLRTQCYGGMFDEIAVPPKSDKKKAPKPITSTCLRVEQLESAAVLLKAGLACQLKDGEE---CENTALAVERVVADMIGLCSAVAVALNRALKDD--DLKGADPA----ILKKWCSFYSKELLPQTKSMVKKTSPKLDAFGLFLPSRM 493
BLAST of EWM29224.1 vs. NCBI_GenBank
Match: gi|1210521164|dbj|GAX19912.1| (hypothetical protein FisN_1Lh618 [Fistulifera solaris]) HSP 1 Score: 107.457 bits (267), Expect = 1.091e-20 Identity = 87/310 (28.06%), Postives = 145/310 (46.77%), Query Frame = 0
Query: 232 QGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVCAKMSREGCKKSRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMKVIGQ-------REIDAKDL-VGQLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLFRLFHEKLRWAIDNQAAAFEGADRSEVAKILERFQASYAR-LYPQVQQFLTQTAQLLGVYGIKLRTKL 532
+ +S + RE+K S + E ++LKAT+PDD + + ++ T D+ Y LRKLW KM ERDWRT KA+Y+ H + P+ K ++ R K + ++F+ + A D + R F++RYS YVL R + + F+E+ V+ + + I + L V QL A +L +GL C L + EE E T + E V D+ L L A+ + +GAD + IL+++ A Y++ L PQ + + +T+ L +G+ L +++
Sbjct: 208 KATSSISANLYREVKGLTSSELEQVMLKATKPDDTPVKGKHVERLVGVTYQIGPKFDI------YDAVLRKLWGKMVERDWRTTMKAVYIMHRFSADGAPEHAAALKARLRELRRTRDPKRKDKFFNTKQLLAGDTTPEN--------VKFRAFLSRYSHYVLLRTQCYGGMFDEIAVLPKSDKKKAPKPITSTCLRVEQLESAAVLLKAGLACQLKDGEE---CENTALAVERVVADMIGLCSAVAVALNRALKDD--DLKGADPA----ILKKWCAFYSKELLPQTKLMVKKTSPKLDAFGLFLPSRM 494
BLAST of EWM29224.1 vs. NCBI_GenBank
Match: gi|397616064|gb|EJK63810.1| (hypothetical protein THAOC_15514 [Thalassiosira oceanica]) HSP 1 Score: 93.5893 bits (231), Expect = 2.681e-16 Identity = 108/395 (27.34%), Postives = 164/395 (41.52%), Query Frame = 0
Query: 229 EKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDD-------VRIYKKVC-AKMSREGCKKSRSRYFDAGAISAVDV-MDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMKVIGQREIDAKDLVG--------------------QLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLFRLFHEKLRWAIDNQAAAFEG-ADRSEVAKILERFQASYARLYPQVQQFLTQTAQLLGVYGIKLRTKLEPAHRFE--EEAVAVGEMVEGGEDIVEGEVVGTATGDTATEAAEGAGEEGGGTASEVEASA 591
EK ++S + RE+K S + E ++LK+TRPD+ + + ++ T D+ Y LRKLW KMAERD RT K++Y+ H + P+ +R +K K S G + +RYFD+ + D D +G R F++RY+ YVL RA+TF F E+ + + L A VL +GL C L + EE E T MC E VA D+ L + A+ + EG A E+ + F + L P ++F+ + L VYG+ L +++ + E E+ + +G M +GGE A D E E EE + V SA
Sbjct: 206 EKTSALSSN---LYREVKGLTSSELEQVMLKSTRPDETPVKTKHVERLVGVTYQISGKYDI------YDAVLRKLWNKMAERDIRTKLKSVYVLHRFSVDGGPEHQEALKQRLRALRKTKDPKRSGGGGRGGSTRYFDSKVLIGPDNDPDNSGY---------RAFLSRYAHYVLTRAQTFGGVFNEISLAQSVQSSPSRKSSRKSSSKASAAKPKSPPLSEEHLKFARMVLKAGLACNLHDGEE---CESTAMCLERVAADLMGL----TSTVATALKRELKGGEGDACDPELVRSWCEFYSD--ELLPDTKRFVKRITNKLDVYGLYLPSRMSASLPPELLEKGLKMG-MSDGGESSAAPREENGAEDDNTPEEDETCAEETDAADTSVAMSA 572
BLAST of EWM29224.1 vs. NCBI_GenBank
Match: gi|298708300|emb|CBJ48363.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 81.2629 bits (199), Expect = 2.625e-12 Identity = 50/165 (30.30%), Postives = 78/165 (47.27%), Query Frame = 0
Query: 243 RELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVCAKMSREGCKKSRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEM 407
RE K S + E ++LKATRPDD P+ + A++ T ++ N Y +RKLW+KMA+++WR AKALY+ H + + K+ A + + + YFD I V +G A +F+ Y+ +VL+R F F E+
Sbjct: 226 REAKSLMSSEMEGVVLKATRPDDLPVKPKHLEALMRPTVEMPKE------FNVYLPVVRKLWSKMADKEWRVSAKALYILHRFAADGSIEHASNLKESVAVLRTHHDSRRKVNYFDMDTICDVKAPSWSGEDVAPMA----EFLQGYADFVLRRTTQFGPGFAEL 380
BLAST of EWM29224.1 vs. NCBI_GenBank
Match: gi|219121825|ref|XP_002181259.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407245|gb|EEC47182.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 80.4925 bits (197), Expect = 3.848e-12 Identity = 112/409 (27.38%), Postives = 183/409 (44.74%), Query Frame = 0
Query: 240 KMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVCAKMSREGCKKSRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMK-------VIGQREIDAKDLVG-QLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLFRLFHEKLRWAIDNQAAAFEGADRSEVAKILERFQASYAR-LYPQVQQFLTQTAQLLGVYGIKLRTKLEPAHRFEEEAVAVGEMVEGGEDIVEGEVVGTATGDTATEAAEGAGEEGGGTASEVEASADARGPVSGRVQRREEEEEEEEEEEEEEEEEEEEENDDDDDDDDEDEEE 639
+ RE+K S + E ++LKATRPDD + + ++ T D+ Y LRKLW KMAE+DWRT K+LY+ H + P+ K ++ R K + +YF++ + A + + R F++RY+ YVL RA+ F F+E+ + I L L A +L +G+ C L +ED E T + AE VA D+ L L A+ +++ +G D ++L+++ Y+ L PQ + + +T+ L YG+ L +++ A EM++ G ++ EG+ + D ATE E+ A+E DA +E E +EE +E EEE + DD+ + E+EE
Sbjct: 244 NIYREVKGLTSSELEQVMLKATRPDDTPVKGKHVERLVGVTYQISPRYDI------YDAVLRKLWGKMAEKDWRTTIKSLYILHRFSADGAPEHAAALKARLRELRRTRDPKRKDKYFNSKQLLAGE--------SNPENIKFRAFMSRYAHYVLLRAQCFGGLFDEISQEPKLDKKKPPKAITTTSLRSEHLEAAAMLLKAGVACQL---KEDEACENTAIAAERVASDLIGLTTSVAIALNRAL--KSSDLKGGD----PELLKKWCEFYSEELLPQTRAMVKKTSSKLDAYGLFLPSRMG--------ASLSPEMLQKGLNL-EGKSL---EPDEATEV-----EDEPVVATESREDMDA-------------TDEPEARDEEAADEVVEEEAEFDDEYEYEEEEY 599 The following BLAST results are available for this feature:
BLAST of EWM29224.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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