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Properties
| Property Name | Value |
|---|
| Product | serine hydroxymethyltransferase |
| Orig transcript id | gnl|cribi|Naga_100119g10.7991.mrna |
| Orig protein id | gnl|cribi|Naga_100119g10.7991 |
| Gene | GLYM2 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:622421..624097 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1434 ID=rna1434|Name=rna1434|organism=Nannochloropsis gaditana|type=mRNA|length=3612bp
CGGAAATTTTTAGCCCTGCCTGCACGACATGGCTTTTCAGAAGATGCACT
GACTGCTTAATTTGACGCAAAACGCGGGTCACAACATAAGAACAATAAAC
CAACACGGTGATGTATTGTTCGCCCGTAAGAGCGTTACAAGCAGGCGGGC
GTGTCCATCCCAGATGGCCTGTTCCTTGTTTGGCGCTGTAGCCCCTTTCC
CCTCTGCCACTCCGCCGAACCATTGGAACGCTTATTTGATTCCCGATAGC
ATTTGCACCTAATCCTAAGCTACTGTACGAGCCTCAATTGGTCAGCGTTC
GGGGCTTGGAGCTCAATGGACGCAAAATGGCATCCCACGTGATCTGAGAC
CACAGGGCCGTGGGACTTCTAGCTGTGCGTCTGCCTCAACTTGTTATTCA
CTAACGAGGAGAGGGGACACTCCGTTCCGGCTAGACACCATAGCTTACGT
TTTGCATTGTCGAAGGTACAAATGCTATGTGGATTTCTGTGCGCTGAAAA
CTGAGCCGAACGGCAGAAATTGCAACGTGACCTGGAATTGTTCCTAGCCC
GATCTCGGCTCGAGTATCTGGACACAATACGACACGTGGACTGCCAGGTT
TGCGGTGGCTCGTCTTGACTGGGCGGCGCGAGTAGATTGGCCATGTAGTG
GGATAGGGAAAGCCCTTCGGTGGTAATCAAGGGGAGACCCCCAGTGGCTC
AGGTGTTGAGTGTCGGCAGTTTGTGCGAATGTAGTCTTGGCGGGCGTCCT
GAGTGTACATTGCGTCTGAATGCGCGATCAATGTGCCATTAACGATCACC
GTGATAAAGCCATAAGCTGCTTATATAGAGGCTTACTGCTCTGTAGCCCA
CGCTGATATCTCGAGCACGCCGGCGTCCTTTAAGAGCCATGACACACACA
TACCACTGTGCTTAAATATCACTAACACATTGGTACAGGTCAACTCTGGA
GGCCCTTTTGTACTGTGCCCTACCTCCCATCCTTCCAAGCCAGAGGGAAT
GGAGTCGGGGGGTATCAGCAAGCTGGTCCACCTCGTGAACGGCGCCGGGG
GCTCCAGCGTCCTGAGGAAGCCCGAGGGCAGGGTCTCCGACTCCTCCAGT
GAGTGCGATGGGGGGGAGTATAGACGGCTTGACAACGAGGGCGGGAGACG
AGATAGAAAGCGCTGAATGCAAGCTTTGGACGTAGATGGCATGCTTTCAA
CGGCGTCGTGCCAAGAAGGGTCAAAAGAGGGCTTTCCTAGGACCTCTAAC
CCCTAGCCCTTACCCTAAAATTAACAGGCCCCGATACAGAGGCGGAGGAG
GAGTCGAACCATTCCTCTTTCGAAACCTCCGCCACGCTCAGCGTCACGCC
CGCCGAGCTCCCTGTCTTGGCGGCGGCCATCCCCAGGCACCAGGGCGGCC
CGGGGGTCAGCGACAGGGAGCCGGTGGAGCTCACTCAGAGTGGGGAGGGG
GGCGGATCGACGCAAGAAGAGGAAGCTGGTACCGCGCTGGAAGACTTTCC
CAGGTCCTCCGTGAGCTCCGGGGGGCGCGCAACAGCTTTGTCCTCCAGCT
CAGTGCTCCAGCCGCCCGAGGACGGCACCCCTGCAGCAAAGGCGCTCGCT
GCAAACGCGGCCGTACCCCGGGTCCCTCGCGGATCCGTGCTCATGTCTTC
CAACAGCAGCAGGCCCGGGGGGGTCCGGGGCACTCGCTTGAGGACTTTCG
GGCGGCAGCTGACGGCGCATCAGGCAGCGACGGCGGCGCGGCGACGGAAA
AAGCGGCGCAATTTTCAGGGCAACGTGATCAAGGGCGAGCACGAGCAGTA
CACGCTGACGATCGGGATGATGCTGGGCATTCGTGTGGCGGTGGGAAGGC
CGCAGCAGATGGACGACCTTACCCTGATGGATTTCATGCAGGTGGACAAG
TACTTGTTCCCCCCCAAGGGGTGCAACAAGCCCCCTCACCGAACCCCGCC
GCACCACCTCTCGCACGACTTCAAGTTCAAGGACTACGCGCCCAAGATTT
TCCACCGCATCCGCCAGCTCTTCGGGGTGGACTCGGCCTCTTACATGCTC
TCTGTCTCCGGGAACTACAACTACCTCGAGTTCATGTCCAATTCCAAGTC
GGGGCAGTTCTTCTTCTACTCGCACGATGGCCGGTTCATGATCAAAACCC
AAACATCGGAGGAGAATAAATTTCTTCGAAAGATCCTCCCACACTACTAC
CAATATGTCTCTCTCAACCCCAACACCCTTCTCACGCGCTTCTACGGCAT
GCACCGCGTGAAAATGCGGCATTTGAAGCGGAAGGTCCACTTTGTCATCA
TGCACTCAGTTTTTGACACGAAAGAAAAGATCTACCGCATCTACGACTTG
AAGGGCTCCACCGTGGGTCGGTCATCGGGGCCCGACAAGGCGCGGAAGGA
GGGCGTTGTCTACAAGGACTTGGACCTGGTGGACGACCACATCAAATTCC
AACTGGGGACCAAGCGGAGGTTATTTATGGAACAGCTGGGGAGAGATGCC
TCCTTCCTGGCCTCTCTGAACATTATGGACTATTCGCTCTTGATAGGTAT
ATACGACAAGACCAGGTACGGCGTGGGAAAGTGAGAGCGATCATGAGAAA
AGGGAAGTCTGTGGGGGTATCTTGAATGGCCTGAATCCTCCGCACGCACA
ACCATACGTTCAACTTAGGCGGGACGAGTCCTTGGAACGGACGCAGTCCG
TTACCAAATCTGCTACAGGCCGTGGAGGTGCCGAGACCGCGGTGGAAGGC
TTAGAAGACGACACGCTTACGCCCTTGGGCGTCTCCTCGCACCCATACGT
GGAGGGCGCAGAGCCGCTGCACCATCACCCCGTTCAGCCACACCCACACC
CCCCTCTGCCCAAACACGCATCACTCCCGCCGTCTACGCTGCCCTCACAC
GGTTTATCCCTACGGTCGCGCCGTGAAAATAGCCACGGGTCTGAGGGTGC
TCGCAGTCAGAGCTTTGGAGGAACTGGCCACGGCTACTTGGAGGGAGAAA
GACCGATGGATGAACATTTCCACAGCGACGACGATTCTGATTTCGACTCG
GAAGCCTCGCTGGAGTCAGACGAGGATGACATTCCCTTGCCTCCCTCAAT
ACTTCCCGCGGGCTTCAGCGGACACAGCAACAGTGAACACAGTCATGCCA
GCGACCGACCAGGAAAAGGGTTGCCTACGGAGGCTTCGATCTTGACGTCT
GCCACAAGCGAGCGGCGCTTGACACACCGACGAGACCATGGGGTACAAAG
TCGCCTCGCGGATGGCACGAAAGGGAACGAGGTTTATTTTGTGGGAGTGA
TCGATATTTTACAGCAATACAATGCCTTGAAGCGGGCAGAGACCTTTTTC
AAAAGCTTCAAGTACGATTCTCGCCAGATATCTGCTGTGGATCCTAAGTG
GTATGCACGCAGATTTGTAGAATTCACATCCAACCACGTCCAATGAGAGA
ACGGAGGGGTCTCATACGTACGGAATTCGAGGTGCGATGAAACGTGCTAT
CGTTGTCAAATACCTGCGATGCGTCCTTTTTGTCGCTGTTGGAAGATTTT
ACATCGCCAACGTTAAGCAAAGCATGTAAATATTAAATCCCATGAAACCA
GAGATAAATGCC back to topprotein sequence of rna1434 >rna1434-protein ID=rna1434-protein|Name=rna1434|organism=Nannochloropsis gaditana|type=polypeptide|length=524bp
MERGGRRWQLAILGLMGWCWNSCAAAFAVPPCYWPPLSLSVAAAAELAAP
STQSQCRASPHGSRLAHAQKSSTVAASVLSGHEAPSILADEDPEVAHIIQ
AERIRQISGIELIASENFASKAVLEALGSVMTNKYSEGRPGARYYGGNEH
VDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLEPHDRI
MGLDLPSGGHLTHGYYNEKRRVSATSIYFESLPYRVDPVTGLVDYDELQK
LASLFRPRLIVAGGSAYPRDWDYARLRAIADACGAYLMTDMAHISGLVSA
GACNNPFPYSDVVTSTTHKSLRGPRSGMIFFRKELAEQVHFAVFPSLQGG
PHNHQIAALAVALKEAAAPSFRQDYIWRVKRNAEALAMELQRLGHSVVTN
GTENHLLLWDMRPHGITGSKVEKLLEAVGISVNKNTIHGDKSASSPGGVR
VGTPAMTTRGLTERDFLHVAAFLDDGLRLALKVQAGADSKKLVDFERAMQ
AHEQEVRALRDRVQHFASNFSFPS back to topmRNA from alignment at CM002457.1:622421..624097+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1434 ID=rna1434|Name=rna1434|organism=Nannochloropsis gaditana|type=mRNA|length=1677bp|location=Sequence derived from alignment at CM002457.1:622421..624097+ (Nannochloropsis gaditana)
atggaaaggggaggtcggCGGTGAGTCGAAAAGTGGCTACATACGCgcga
tttttttttcccatgaCAAGCAATGTTGAGATTGGAGACTAATCCCATTC
CCGCATAAAATGCTCGACGTAGATGGCAACTTGCAATTTTGGGGCTGATG
GGATGGTGTTGGAATTCATGTGCGGCAGCTTTTGCCGTGCCACCGTGCTA
TTGGCCGCCGCTATCTCTCTCAGTGGCCGCCGCAGCTGAATTGGCAGCTC
CCTCGACTCAGTCCCAGTGCCGCGCGAGCCCTCATGGCAGCCGGCTAGCA
CATGCACAAAAATCTTCCACCGTGGCAGCATCTGTCCTTTCTGGCCATGA
GGCCCCCTCAATTTtggcggacgaggacccCGAGGTCGCGCACATCATAC
AGGCAGAGCGGATACGGCAGATCTCGGGAATCGAGTTAATCGCCAGCGAG
AATTTTGCTTCAAAAGCTGTACTGGAGGCTCTAGGATCAGTAATGACTAA
CAAATACTCTGAAGGTCGACCAGGAGCGAGATACTATGGAGGAAACGAGC
ATGTGGATGCCCTCGAGCGACTGTGCGAGGCGCgagccctctctctcttc
aaTCTGTCTTCGGAAAGCTGGGGCGTGAACGTGCAGCCTTACTCGGGCAG
TCCGGCCAATTTCGCCGTCTACACGGCTCTACTGGAGCCCCACGACCGCA
TCATGGGGCTGGACCTGCCCTCGGGCGGGCATCTGACGCATGGTTACTAC
AACGAAAAGCGCCgcgtctccgccacctccatctaCTTCGAGTCTCTGCC
CTACCGCGTGGACCCCGTCACTGGCCTGGTGGACTACGACGAGCTTCAAA
AGCTCGCCTCACTCTTCCGGCCGCGCCTCATCGTCGCGGGGGGTAGCGCC
TATCCGCGGGACTGGGACTACGCGCGGCTCAGGGCCATCGCGGACGCGTG
CGGCGCCTATTTGATGACCGACATGGCTCACATCAGCGGCCTTGTGTCTG
CGGGCGCCTGCAATAACCCCTTTCCCTACTCGGATGTGGTCACGTCGACC
ACACACAAGTCTCTGCGGGGGCCGCGGTCGGGCATGATCTTCTTCAGGAA
GGAGCTGGCCGAGCAGGTCCATTTCGCCGTGTTTCCGTCCTTGCAGGGGG
GCCCCCACAACCATCAAATCGCTGCACTAGCTGTGGCACTCAAGGAGGCT
GCCGCGCCTTCTTTTCGACAGGACTACATTTGGCGCGTGAAGCGGAACGC
GGAGGCTTTGGCCATGGAGCTCCAGCGGCTGGGGCACAGCGTGGTGACCA
ACGGGACCGAGAACCACCTGTTGCTCTGGGACATGCGCCCGCACGGTATT
ACAGGCTCCAAGGTGGAAAAACTtctggaggcggtgggcatATCGGTGAA
CAAGAACACCATCCACGGAGACAAGAGCGCCAGCTCCCCCGGCGGCGTCC
GAGTGGGCACTCCGGCCATGACCACGCGCGGTCTCACAGAGCGAGACTTC
CTGCACGTGGCGGCCTTCCTCGACGACGGCTTGCGTCTAGCGCTCAAGGT
GCAGGCTGGGGCGGACAGCAAGAAACTAGTGGACTTCGAGAGGGCGATGC
AGGCTCACGAACAAGAGGTGCGAGCATTGCGGGACCGCGTGCAACATTTT
GCCTCcaacttctccttcccctcctga back to topCoding sequence (CDS) from alignment at CM002457.1:622421..624097+ >rna1434 ID=rna1434|Name=rna1434|organism=Nannochloropsis gaditana|type=CDS|length=3150bp|location=Sequence derived from alignment at CM002457.1:622421..624097+ (Nannochloropsis gaditana)
atggaaaggggaggtcggCGATGGCAACTTGCAATTTTGGGGCTGATGGG
ATGGTGTTGGAATTCATGTGCGGCAGCTTTTGCCGTGCCACCGTGCTATT
GGCCGCCGCTATCTCTCTCAGTGGCCGCCGCAGCTGAATTGGCAGCTCCC
TCGACTCAGTCCCAGTGCCGCGCGAGCCCTCATGGCAGCCGGCTAGCACA
TGCACAAAAATCTTCCACCGTGGCAGCATCTGTCCTTTCTGGCCATGAGG
CCCCCTCAATTTtggcggacgaggacccCGAGGTCGCGCACATCATACAG
GCAGAGCGGATACGGCAGATCTCGGGAATCGAGTTAATCGCCAGCGAGAA
TTTTGCTTCAAAAGCTGTACTGGAGGCTCTAGGATCAGTAATGACTAACA
AATACTCTGAAGGTCGACCAGGAGCGAGATACTATGGAGGAAACGAGCAT
GTGGATGCCCTCGAGCGACTGTGCGAGGCGCgagccctctctctcttcaa
TCTGTCTTCGGAAAGCTGGGGCGTGAACGTGCAGCCTTACTCGGGCAGTC
CGGCCAATTTCGCCGTCTACACGGCTCTACTGGAGCCCCACGACCGCATC
ATGGGGCTGGACCTGCCCTCGGGCGGGCATCTGACGCATGGTTACTACAA
CGAAAAGCGCCgcgtctccgccacctccatctaCTTCGAGTCTCTGCCCT
ACCGCGTGGACCCCGTCACTGGCCTGGTGGACTACGACGAGCTTCAAAAG
CTCGCCTCACTCTTCCGGCCGCGCCTCATCGTCGCGGGGGGTAGCGCCTA
TCCGCGGGACTGGGACTACGCGCGGCTCAGGGCCATCGCGGACGCGTGCG
GCGCCTATTTGATGACCGACATGGCTCACATCAGCGGCCTTGTGTCTGCG
GGCGCCTGCAATAACCCCTTTCCCTACTCGGATGTGGTCACGTCGACCAC
ACACAAGTCTCTGCGGGGGCCGCGGTCGGGCATGATCTTCTTCAGGAAGG
AGCTGGCCGAGCAGGTCCATTTCGCCGTGTTTCCGTCCTTGCAGGGGGGC
CCCCACAACCATCAAATCGCTGCACTAGCTGTGGCACTCAAGGAGGCTGC
CGCGCCTTCTTTTCGACAGGACTACATTTGGCGCGTGAAGCGGAACGCGG
AGGCTTTGGCCATGGAGCTCCAGCGGCTGGGGCACAGCGTGGTGACCAAC
GGGACCGAGAACCACCTGTTGCTCTGGGACATGCGCCCGCACGGTATTAC
AGGCTCCAAGGTGGAAAAACTtctggaggcggtgggcatATCGGTGAACA
AGAACACCATCCACGGAGACAAGAGCGCCAGCTCCCCCGGCGGCGTCCGA
GTGGGCACTCCGGCCATGACCACGCGCGGTCTCACAGAGCGAGACTTCCT
GCACGTGGCGGCCTTCCTCGACGACGGCTTGCGTCTAGCGCTCAAGGTGC
AGGCTGGGGCGGACAGCAAGAAACTAGTGGACTTCGAGAGGGCGATGCAG
GCTCACGAACAAGAGGTGCGAGCATTGCGGGACCGCGTGCAACATTTTGC
CTCcaacttctccttcccctcctgaatggaaaggggaggtcggCGATGGC
AACTTGCAATTTTGGGGCTGATGGGATGGTGTTGGAATTCATGTGCGGCA
GCTTTTGCCGTGCCACCGTGCTATTGGCCGCCGCTATCTCTCTCAGTGGC
CGCCGCAGCTGAATTGGCAGCTCCCTCGACTCAGTCCCAGTGCCGCGCGA
GCCCTCATGGCAGCCGGCTAGCACATGCACAAAAATCTTCCACCGTGGCA
GCATCTGTCCTTTCTGGCCATGAGGCCCCCTCAATTTtggcggacgagga
cccCGAGGTCGCGCACATCATACAGGCAGAGCGGATACGGCAGATCTCGG
GAATCGAGTTAATCGCCAGCGAGAATTTTGCTTCAAAAGCTGTACTGGAG
GCTCTAGGATCAGTAATGACTAACAAATACTCTGAAGGTCGACCAGGAGC
GAGATACTATGGAGGAAACGAGCATGTGGATGCCCTCGAGCGACTGTGCG
AGGCGCgagccctctctctcttcaaTCTGTCTTCGGAAAGCTGGGGCGTG
AACGTGCAGCCTTACTCGGGCAGTCCGGCCAATTTCGCCGTCTACACGGC
TCTACTGGAGCCCCACGACCGCATCATGGGGCTGGACCTGCCCTCGGGCG
GGCATCTGACGCATGGTTACTACAACGAAAAGCGCCgcgtctccgccacc
tccatctaCTTCGAGTCTCTGCCCTACCGCGTGGACCCCGTCACTGGCCT
GGTGGACTACGACGAGCTTCAAAAGCTCGCCTCACTCTTCCGGCCGCGCC
TCATCGTCGCGGGGGGTAGCGCCTATCCGCGGGACTGGGACTACGCGCGG
CTCAGGGCCATCGCGGACGCGTGCGGCGCCTATTTGATGACCGACATGGC
TCACATCAGCGGCCTTGTGTCTGCGGGCGCCTGCAATAACCCCTTTCCCT
ACTCGGATGTGGTCACGTCGACCACACACAAGTCTCTGCGGGGGCCGCGG
TCGGGCATGATCTTCTTCAGGAAGGAGCTGGCCGAGCAGGTCCATTTCGC
CGTGTTTCCGTCCTTGCAGGGGGGCCCCCACAACCATCAAATCGCTGCAC
TAGCTGTGGCACTCAAGGAGGCTGCCGCGCCTTCTTTTCGACAGGACTAC
ATTTGGCGCGTGAAGCGGAACGCGGAGGCTTTGGCCATGGAGCTCCAGCG
GCTGGGGCACAGCGTGGTGACCAACGGGACCGAGAACCACCTGTTGCTCT
GGGACATGCGCCCGCACGGTATTACAGGCTCCAAGGTGGAAAAACTtctg
gaggcggtgggcatATCGGTGAACAAGAACACCATCCACGGAGACAAGAG
CGCCAGCTCCCCCGGCGGCGTCCGAGTGGGCACTCCGGCCATGACCACGC
GCGGTCTCACAGAGCGAGACTTCCTGCACGTGGCGGCCTTCCTCGACGAC
GGCTTGCGTCTAGCGCTCAAGGTGCAGGCTGGGGCGGACAGCAAGAAACT
AGTGGACTTCGAGAGGGCGATGCAGGCTCACGAACAAGAGGTGCGAGCAT
TGCGGGACCGCGTGCAACATTTTGCCTCcaacttctccttcccctcctga back to top
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