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Properties
| Property Name | Value |
|---|
| Product | Selenoprotein SelK/SelG |
| Orig transcript id | gnl|cribi|Naga_100029g10.9530.mrna |
| Orig protein id | gnl|cribi|Naga_100029g10.9530 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:581903..582846 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1415 ID=rna1415|Name=rna1415|organism=Nannochloropsis gaditana|type=mRNA|length=2733bp
AGAGAGCTCTGGGCGAAGAAACAACAGCAACGACACAATTTTCTGGAAGA
CATGAATGCACACATGACCGGGCGGAAAAGTACGGGCAGCGGCAGCGGCC
AGGAACCGCTTTCCCAACTCAAAGCAGCAATGACCAAAATGGATGACACA
AGCCTCAGACAAGCTTGTCTAGAGCTTAGTCGGGAGTTGAGGCGAGAGTA
TATATTCTACTGCGTCCTTGACGGGTGTTTGGGGATGCACGCTCAGCCAA
GGTGGAGAACGACGGATGGAGGGTGGATGAGCAAACCCCCTAAGGCCGCG
CGCATTGTTGCGCTTTTATCCAGCCACAGCAAATATTCCTGGAACATATA
CCATTTACTTGATATTCTCTCCCGTGATCGAGAAGGCTTCGCTCTGGACA
TAGATATATTGCCCATCAGGACACGTTATTACTTGGACGGTGATCCATCC
GAAGCAAATGAGCGCTTGAGTACCGAGAACAGCAAACGCTTGTACGAGTA
CTTCTTCTTCGCCCGCACCCGGCCGCATGCCATAGCGCCAACATCAGGAA
GCGGGGTTGCCATCAGCCAAAACGGCTCAACTCGGTTGCCATTCGTCATC
CCTCACCTCGATTTCTACCACTTCATCTTCGCCTACTGGGCCGTCTGCCC
CAAGAGCGGGACTGCGACGACCTCCCCGCATCCATCCTTAAGCTTCCTAA
AAGAAATCGCCAGCAAACCAATCACACCAGTCAGCATCTTGGCAAACCCA
AGAGTCAGCGTTTACTGTACAGTCCTCCGCTCGTACCTCCTCACCTACTT
CCCTTCCCCGGCGGGCCCCGATCTTGACCGGAAAGGGGGACTTTCAGATC
CAGTCAAGGCATTGGCCCTTAACGAAGAGGCTGAAAAGTTCTTGCGAATT
TTTATCGAGATGTGGCTTGAGAGGAACCCGGTCCACAATCCCGACGCCAA
GACGCATGTGGAGTCCAGCGACAACGAAAACCAGATTCTTCCTGTGAGTC
GAGACACCACCTATGAGGAGCCTACCCTCGAGATTCTCCTTGCCCTTCTG
CTTTGGGTGCCTTATCTTCTCGCCCGCAAAGTTGAAGTGGAGGTCATGCT
TCAGGGGCAAGGATCTCGGGGAGTGCGTGCATCCCCAGCGGCTCCAGCCT
TTTGCCCCGCCCTAGACGCGTTGCAGCAGCCGGTGTTCATTTTCCTCGCT
CTAGGATTTCGGCGCCTTCGGATTGAGAAAGAAGGGTGGCTTAAATTCCT
CTTGCTTGTCGAGCTGTGGCTATCCTGGTTGACCCCCAGCGAAGTAACGG
TCAGGTTGGCGCCCGGGAAGCGCTCGCAAGATTGCTCCCTCGCACTCAGG
TGGCAACAAAGCTTCCTGAAGGCCTACGTGGTGAGCAACTTTCATTTCTA
TACCACACTGTACGTCCTGTACATGCGCAAGGTCCGGGAGGCACTCGGCG
CGGACGCCTCGATGCGATCCGTCGTCCTGGTCCAGCTTGCCCGTGTGCTC
AAAGCCGTCGGTCATCCCGACCTGCGGGAAGCACTCCTGTCTGTCTCTCG
CACCGCCCACGAGCTATGGCAAGCTGGAAGTCAGTTGCGTGGACGCATTT
TATTGACGCACCATTTGCATCGCCTGCGGCTTACACGGAGCAAGCCTTGT
CTGTGGAGAGACACCGCGCAGGACGCCCACCACTTAGCGGCCGAGCTACT
CGCCATCCGAAAGCGGGCCGTGAAGGCGATGGAGGACCTGGAGCATTCGT
GGCGCGCGTCTCTGATCAAGGTGACCTCCACGGTGTGGCTCTGGATCAAA
AGCTGGGTGAGCAAGGGCGCGTGTGACAGCTTTGGGCTTGTCGGCCGGCT
GGAGACCCTGCTTGAGAAACTGGTAGTGGGACCAGGGCTGACGGGTGATC
GAGGAGGTGCCTCGAGTCTGCCTTCCCAAATTGACGATGTCTTGGAAGAG
CTCTACGAGATATTCCCCTCCGTTCGGATGAAATGCCAGCAATCCCTGCG
GGAGGACGAGGCAGACGCTCAGCTTCGCGATCCAGACAGGCGAGGCATCC
TGTTGACAGAGAGGGGGCGAGAGCAGCTGTTGGCAGGGCAGCGAGCGTGT
GACCCAAGCAAGGCCGTCTACATGGGAGATCCCCTCTTCGACCCCGTCTT
GGCTTCGGATGAATATGGGTTCCTTCTCCCGTGGGCGCAAAGGGCGTCTA
TATGGCTGAGCAAAAAATACAAACCATCCTGGCAGTCAGGGGAAGAGAGA
GAGATGGAAAGGAAGCGAAACCAACACGGGACGGGTGGTGAGCAGAATTC
TCACGGAACGAGCGAGGAGAAAGCATCAGGCAGGGGGGACGAATCTAGCA
TAGGAGACGAATGGGGCCATGTGGAGATTAAAGAGACCAAGCCCACCGAC
TTGGCTCCTCTCAATTTGCGCTGGATGATTCGGCGATGGGTGGTACTGAG
TGCATTCATCGTCTTGCTCGCAGTTGCTGCCCTTTTGGTCATGCCATGGG
GGAGAGTGCAAGCGATGCTTGCAGAAGTATCACGAGCTCAAGACGATGGA
TGGGAGGAAGAGGTAGAGGCATGTATTGTACAATAAAACTAACGACATCC
GTATTTTACGTACTTTACGCTTCTAGAGCACCAAGATTCTGTCTTTGCAC
TCCATGTACCAGTGCTCGCCCTCTTAAATGATTGCACGTACGTGCTGTGC
ATGATTTACGAAGTGAAACAGCCATTCAATTGC back to topprotein sequence of rna1415 >rna1415-protein ID=rna1415-protein|Name=rna1415|organism=Nannochloropsis gaditana|type=polypeptide|length=104bp
MVYVERDGTMTAKKTMIQSIMDAAWGLVNVVGLFFSTFVPSTREERRVQA
LERRGARGGRTSSSGGNAGGAGGGLRHRGSNIHSLRQSTQATVPGGGCSG
GTCG back to topmRNA from alignment at CM002457.1:581903..582846- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1415 ID=rna1415|Name=rna1415|organism=Nannochloropsis gaditana|type=mRNA|length=944bp|location=Sequence derived from alignment at CM002457.1:581903..582846- (Nannochloropsis gaditana)
TTATTGTAAAGCTCCACGCCAGCTCTGGTCTTTGCTCTGCATGCTTCATC
GACCTCAATTCCTCTGGTTTTAAACAGGTGATAAAGAAGATATACTCCCT
GAGTTTTCGACTTACTTTGCTCTTTGAAGCCAGCGGTGCCAGCAGCCATG
GTCTACGTGGAGCGTGACGGTAAGTTGTGTGAAGCCAATGTCAGTGTGCA
TTTTCGCAGTCCTGCGGTTGCTCCGTCTTCCTTGCCAAAGTAGGAGTCGT
CCTTACCCTTGCAAAAATTGTCAATCCTGTGGGTTAGGCACAATGACGGC
GAAGAAGACGATGATCCAGAGCATTATGGACGCAGCGTGGGGACTTGTTA
ATGTAGTAGGCTTGTTTTTCTCCACTTTCGTCCCGTCCACTCGCGAGGAA
CGGCGCGTTCAGGCATTGGAACGTCGCGGGGCGCGCGGAGGGAGGACCTC
AAGCAGCGGCGGCAATGCAGGGGGTGCAGGAGGTGGCTTGCGACACAGGG
GATCAAATATCCACAGCTTACGGCAGTCTACACAAGCGACTGTTCCAGGG
GGCGGATGTTCAGGGGGTACCTGTGGTTGAGATACCATGTAGGGAAAGCG
TGCACATGTGAAAGCTTTTTTGTGCCGGACGAAAGGCGCTTACTTTAAGC
ACGACAAGAGACCAAAGACAATTCAGGGCGTCGGCTGTAGAAAGATATGA
TCACGTAATTTTTTCTTTGTCTTGGCGTTTGCAAGCTATGAGACAAGGTG
TGTCCGCTCGATACATCGTCCTGTTTCTGTTCTCACCATTGTAGTTTGAA
ATGTCGGTGGCTGAGCATCACGCCCTTCGTGTGATGTGGATCTTCTTTGT
GTCGAACAGGCCGTCTCTGCTCGGATCCTGGCTTGCATGTTCTACGATCT
CTAGTTTGGGTGACCGTGAGACGAATACGGACATTTAACTTTCA back to topCoding sequence (CDS) from alignment at CM002457.1:581903..582846- >rna1415 ID=rna1415|Name=rna1415|organism=Nannochloropsis gaditana|type=CDS|length=630bp|location=Sequence derived from alignment at CM002457.1:581903..582846- (Nannochloropsis gaditana)
GCACAATGACGGCGAAGAAGACGATGATCCAGAGCATTATGGACGCAGCG
TGGGGACTTGTTAATGTAGTAGGCTTGTTTTTCTCCACTTTCGTCCCGTC
CACTCGCGAGGAACGGCGCGTTCAGGCATTGGAACGTCGCGGGGCGCGCG
GAGGGAGGACCTCAAGCAGCGGCGGCAATGCAGGGGGTGCAGGAGGTGGC
TTGCGACACAGGGGATCAAATATCCACAGCTTACGGCAGTCTACACAAGC
GACTGTTCCAGGGGGCGGATGTTCAGGGGGTACCTGTGGTTGAATGGTCT
ACGTGGAGCGTGACGGCACAATGACGGCGAAGAAGACGATGATCCAGAGC
ATTATGGACGCAGCGTGGGGACTTGTTAATGTAGTAGGCTTGTTTTTCTC
CACTTTCGTCCCGTCCACTCGCGAGGAACGGCGCGTTCAGGCATTGGAAC
GTCGCGGGGCGCGCGGAGGGAGGACCTCAAGCAGCGGCGGCAATGCAGGG
GGTGCAGGAGGTGGCTTGCGACACAGGGGATCAAATATCCACAGCTTACG
GCAGTCTACACAAGCGACTGTTCCAGGGGGCGGATGTTCAGGGGGTACCT
GTGGTTGAATGGTCTACGTGGAGCGTGACG back to top
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