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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100029g20.9517.mrna |
| Orig protein id | gnl|cribi|Naga_100029g20.9517 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:557562..559405 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1405 ID=rna1405|Name=rna1405|organism=Nannochloropsis gaditana|type=mRNA|length=699bp
ATGACGGGAAGAAGGATTAAAACTGACGCTTTTGGGAAAGAGTATGTCGC
ATTCCAGATAGGTGTTAAAAATGGAAATTTAGCTTGGCAACTCAAGTTTA
CGTCCTACATGGGGGTCCGCAAATTACAAGGGCAAAGGACAGCTGCAATG
GAAAAAAAGTTGCAAGGATTTGTGGAACGGATCAATGGTCGGCCATATGG
ATTTCCGTTGACTACATTGTTCGCGAAGAAGTACATCACCAGCGACACAG
ACGTTGCTCCTGTTACTGCTTACGGCTTACCTTCTCCGAAGTCAAATACT
TGGCATTCGAATCTCCGCTCTGTCCCTTTCTACCCTGACTTCTTGAACAA
TCGCCGGAGGCATTCAAAAGTCACGGCCTTGTCGGCTTCAAATTCCTCCC
AAGCAGATTCAAGTAGCGGAATGGAGGTAGTTGAGAAGGCGAGAAGGAAA
TTTTCCCATGAGAGAGGTTTCTTTTGTAGCAATCTAGTGGCTGCTGCATT
GCGAGAGATGTGCGTGCTAAAAGCAGACATTAATGATGACTACTTTTGGC
CCGGTGCCTTCACTGAAGGTGGTGAGATAGACGATGCCTTTCGGGATGGG
TACTGTCTCAGTGACGTGATGTTGGTGGACACCGCCACGCTTGAGCTGGG
GCGAGCCACATTTGAAGCGGCAGAGATAGCGCTTTCGTCCTCAAAGTGA back to topprotein sequence of rna1405 >rna1405-protein ID=rna1405-protein|Name=rna1405|organism=Nannochloropsis gaditana|type=polypeptide|length=581bp
MRNQDRERVESALRDSVEAQERLSRKFQHAVSTKLKVESQLRIARKIENV
VDQGEVQQQPQQQQPPPPQKQPQQPQPQPQQQKQQSQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQRRRRRRRRQRYVERLRSQKPK
CAMEAQETTCTSVPNPGPNTCGYDDSRGKLSSTDSIARVELVEREAILRS
LRARLRRQGQAQRMQLVEWESQLQLKEERICRVAEKLRKQRLNLRFLKYR
AERQREKAMSKSIGKSSQIPSALSERKYVRTPAVDSESNLALNISIMHSN
KDSKKESQEIRPASQICDKRAKFVGTHGKDEGNANLLASLDVSDSLTNLA
REASLFFWKDKQRCQHLASGSASSRALDKNEDEVKPVIGTNGLRLFETES
GGDIAEETIDMKELGRKRLSVSSDEAVEARHLISSKNAEYDIDEFRSQLY
STPTLPGTLSKESVLLSSVPKPVLPQLPSSVRDRLFTKQVSATIEKVRSA
KSRVAEACTQAGIDVTIQKHSQKPLEAQHEQPDMKSRKGKHCGSIKTRRT
STSSQHNRLQWLSAFDGRFAKSLSTLEQLKS back to topmRNA from alignment at CM002457.1:557562..559405+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1405 ID=rna1405|Name=rna1405|organism=Nannochloropsis gaditana|type=mRNA|length=1844bp|location=Sequence derived from alignment at CM002457.1:557562..559405+ (Nannochloropsis gaditana)
ATGAGAAATCAGGATAGGGAGCGTGTAGAGTCAGCGCTACGAGATAGTGT
GGAGGCTCAAGAAAGACTATCCCGAAAATTTCAGCATGCGGTGTCAACCA
AACTCAAAGTCGAATCGCAGCTTCGTATAGCGCGGAAAATCGAGAATGTT
GTAGATCAAGGTGAAGtacaacaacaaccacaacaacaacaaccaccacc
accacaaaaACAGCCACAACAGCCACAACcacaaccacaacaacaaaAAC
AACAAtcacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaaca
acaacaacaacaacaacaacaacaacaacaacaacaacgacgacgacgac
gacgacgacgacagAGATATGTTGAGCGCTTGCGATCACAGAAGCCAAAA
TGTGCAATGGAAGCACAAGAAACAACATGCACATCTGTCCCCAATCCTGG
GCCTAACACGTGTGGCTATGATGATTCCCGTGGTAAACTATCATCAACAG
ACTCTATCGCGCGAGTGGAGCTGGTCGAGCGCGAGGCTATATTGAGATCA
CTACGGGCCCGGTTACGACGGCAAGGACAAGCACAGCGTATGCAACTTGT
TGAATGGGAGTCTCAACTTCAAttaaaagaggaaaggatctGCCGCGTGG
CTGAGAAATTGCGCAAGCAACGTTTGAATTTACGTTTCTTAAAATATCGT
GCTGAGCGACAGCGGGAAAAGGCAATGAGCAAATCTATCGGCAAATCGTC
TCAAATCCCATCTGCACTCAGTGAAAGGAAGTACGTCCGTACTCCTGCTG
TTGATAGTGAAAGTAATCTTGCGTTGAACATTTCAATCATGCACTCAAAC
AAAGATTCTAAGAAAGAGTCGCAAGAGATCCGACCTGCATCTCAGATATG
TGATAAAAGGGCGAAATTTGTAGGGACGCACGGAAAAGACGAAGGGAACG
CTAATTTACTCGCTTCATTGGATGTATCAGATAGCCTGACAAATCTGGCG
AGAGAggcttctcttttcttttggAAAGATAAGCAACGATGTCAACACCT
TGCTAGCGGTAGTGCTTCATCGAGGGCCCTTGACAAGAATGAAGATGAAG
TCAAGCCTGTTATTGGGACGAATGGCCTCCGGCTATTTGAGACCGAGAGT
GGCGGAGATATTGCCGAGGAAACGATTGATATGAAAGAATTAGGCAGGAA
GCGACTCTCTGTTAGTTCGGATGAAGCAGTCGAAGCCAGACATCTGATAA
GCAGCAAAAACGCAGAATACGACATAGACGAGTTTCGGAGCCAGCTTTAT
TCGACGCCTACACTTCCTGGCACCCTTTCCAAAGAATCTGTTCTTTTAAG
TTCAGTGCCTAAACCAGTACTCCCTCAGTTGCCATCCTCCGTGTAAGAAT
GTCGActcgagggggggagagatgcCCAATTAATTTTTGCTCTTAACAAG
TCTTTCGCTCCTTGATGTGCACGAACAACTTCAAAAACAGGCGCGACCGT
CTTTTCACAAAGCAAGTATCTGCAACGATTGAGAAGGTTCGATCTGCGAA
ATCTCGAGTGGCTGAAGCTTGTACACAAGCTGGAATCGATGTCACAATCC
AAAAGCATTCTCAAAAACCTCTTGAGGCCCAACACGAACAACCTGACATG
AAgtcaagaaaaggaaagcatTGTGGATCAATAAAAACCCGGCGCACATC
CACCAGCAGCCAACATAATCGACTGCAATGGTTAAGCGCGTTCGATGGGC
GCTTTGCTAAAAGCCTGAGCACATTGGAGCAACTGAAATCGTAG back to topCoding sequence (CDS) from alignment at CM002457.1:557562..559405+ >rna1405 ID=rna1405|Name=rna1405|organism=Nannochloropsis gaditana|type=CDS|length=3492bp|location=Sequence derived from alignment at CM002457.1:557562..559405+ (Nannochloropsis gaditana)
ATGAGAAATCAGGATAGGGAGCGTGTAGAGTCAGCGCTACGAGATAGTGT
GGAGGCTCAAGAAAGACTATCCCGAAAATTTCAGCATGCGGTGTCAACCA
AACTCAAAGTCGAATCGCAGCTTCGTATAGCGCGGAAAATCGAGAATGTT
GTAGATCAAGGTGAAGtacaacaacaaccacaacaacaacaaccaccacc
accacaaaaACAGCCACAACAGCCACAACcacaaccacaacaacaaaAAC
AACAAtcacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaaca
acaacaacaacaacaacaacaacaacaacaacaacaacgacgacgacgac
gacgacgacgacagAGATATGTTGAGCGCTTGCGATCACAGAAGCCAAAA
TGTGCAATGGAAGCACAAGAAACAACATGCACATCTGTCCCCAATCCTGG
GCCTAACACGTGTGGCTATGATGATTCCCGTGGTAAACTATCATCAACAG
ACTCTATCGCGCGAGTGGAGCTGGTCGAGCGCGAGGCTATATTGAGATCA
CTACGGGCCCGGTTACGACGGCAAGGACAAGCACAGCGTATGCAACTTGT
TGAATGGGAGTCTCAACTTCAAttaaaagaggaaaggatctGCCGCGTGG
CTGAGAAATTGCGCAAGCAACGTTTGAATTTACGTTTCTTAAAATATCGT
GCTGAGCGACAGCGGGAAAAGGCAATGAGCAAATCTATCGGCAAATCGTC
TCAAATCCCATCTGCACTCAGTGAAAGGAAGTACGTCCGTACTCCTGCTG
TTGATAGTGAAAGTAATCTTGCGTTGAACATTTCAATCATGCACTCAAAC
AAAGATTCTAAGAAAGAGTCGCAAGAGATCCGACCTGCATCTCAGATATG
TGATAAAAGGGCGAAATTTGTAGGGACGCACGGAAAAGACGAAGGGAACG
CTAATTTACTCGCTTCATTGGATGTATCAGATAGCCTGACAAATCTGGCG
AGAGAggcttctcttttcttttggAAAGATAAGCAACGATGTCAACACCT
TGCTAGCGGTAGTGCTTCATCGAGGGCCCTTGACAAGAATGAAGATGAAG
TCAAGCCTGTTATTGGGACGAATGGCCTCCGGCTATTTGAGACCGAGAGT
GGCGGAGATATTGCCGAGGAAACGATTGATATGAAAGAATTAGGCAGGAA
GCGACTCTCTGTTAGTTCGGATGAAGCAGTCGAAGCCAGACATCTGATAA
GCAGCAAAAACGCAGAATACGACATAGACGAGTTTCGGAGCCAGCTTTAT
TCGACGCCTACACTTCCTGGCACCCTTTCCAAAGAATCTGTTCTTTTAAG
TTCAGTGCCTAAACCAGTACTCCCTCAGTTGCCATCCTCCGTGCGCGACC
GTCTTTTCACAAAGCAAGTATCTGCAACGATTGAGAAGGTTCGATCTGCG
AAATCTCGAGTGGCTGAAGCTTGTACACAAGCTGGAATCGATGTCACAAT
CCAAAAGCATTCTCAAAAACCTCTTGAGGCCCAACACGAACAACCTGACA
TGAAgtcaagaaaaggaaagcatTGTGGATCAATAAAAACCCGGCGCACA
TCCACCAGCAGCCAACATAATCGACTGCAATGGTTAAGCGCGTTCGATGG
GCGCTTTGCTAAAAGCCTGAGCACATTGGAGCAACTGAAATCGTAGATGA
GAAATCAGGATAGGGAGCGTGTAGAGTCAGCGCTACGAGATAGTGTGGAG
GCTCAAGAAAGACTATCCCGAAAATTTCAGCATGCGGTGTCAACCAAACT
CAAAGTCGAATCGCAGCTTCGTATAGCGCGGAAAATCGAGAATGTTGTAG
ATCAAGGTGAAGtacaacaacaaccacaacaacaacaaccaccaccacca
caaaaACAGCCACAACAGCCACAACcacaaccacaacaacaaaAACAACA
Atcacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaac
aacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacgacgacgacgacgacg
acgacgacagAGATATGTTGAGCGCTTGCGATCACAGAAGCCAAAATGTG
CAATGGAAGCACAAGAAACAACATGCACATCTGTCCCCAATCCTGGGCCT
AACACGTGTGGCTATGATGATTCCCGTGGTAAACTATCATCAACAGACTC
TATCGCGCGAGTGGAGCTGGTCGAGCGCGAGGCTATATTGAGATCACTAC
GGGCCCGGTTACGACGGCAAGGACAAGCACAGCGTATGCAACTTGTTGAA
TGGGAGTCTCAACTTCAAttaaaagaggaaaggatctGCCGCGTGGCTGA
GAAATTGCGCAAGCAACGTTTGAATTTACGTTTCTTAAAATATCGTGCTG
AGCGACAGCGGGAAAAGGCAATGAGCAAATCTATCGGCAAATCGTCTCAA
ATCCCATCTGCACTCAGTGAAAGGAAGTACGTCCGTACTCCTGCTGTTGA
TAGTGAAAGTAATCTTGCGTTGAACATTTCAATCATGCACTCAAACAAAG
ATTCTAAGAAAGAGTCGCAAGAGATCCGACCTGCATCTCAGATATGTGAT
AAAAGGGCGAAATTTGTAGGGACGCACGGAAAAGACGAAGGGAACGCTAA
TTTACTCGCTTCATTGGATGTATCAGATAGCCTGACAAATCTGGCGAGAG
AggcttctcttttcttttggAAAGATAAGCAACGATGTCAACACCTTGCT
AGCGGTAGTGCTTCATCGAGGGCCCTTGACAAGAATGAAGATGAAGTCAA
GCCTGTTATTGGGACGAATGGCCTCCGGCTATTTGAGACCGAGAGTGGCG
GAGATATTGCCGAGGAAACGATTGATATGAAAGAATTAGGCAGGAAGCGA
CTCTCTGTTAGTTCGGATGAAGCAGTCGAAGCCAGACATCTGATAAGCAG
CAAAAACGCAGAATACGACATAGACGAGTTTCGGAGCCAGCTTTATTCGA
CGCCTACACTTCCTGGCACCCTTTCCAAAGAATCTGTTCTTTTAAGTTCA
GTGCCTAAACCAGTACTCCCTCAGTTGCCATCCTCCGTGCGCGACCGTCT
TTTCACAAAGCAAGTATCTGCAACGATTGAGAAGGTTCGATCTGCGAAAT
CTCGAGTGGCTGAAGCTTGTACACAAGCTGGAATCGATGTCACAATCCAA
AAGCATTCTCAAAAACCTCTTGAGGCCCAACACGAACAACCTGACATGAA
gtcaagaaaaggaaagcatTGTGGATCAATAAAAACCCGGCGCACATCCA
CCAGCAGCCAACATAATCGACTGCAATGGTTAAGCGCGTTCGATGGGCGC
TTTGCTAAAAGCCTGAGCACATTGGAGCAACTGAAATCGTAG back to top
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