EWM29260.1, cds1403 (CDS) Nannochloropsis gaditana

Overview
NameEWM29260.1
Unique Namecds1403
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:557562..559003 +
Alignment locationCM002457.1:559102..559405 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29260.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100029g20.9517.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:557562..559003 +
CM002457.1supercontigCM002457.1:559102..559405 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
Homology
[Close]
BLAST of EWM29260.1 vs. NCBI_GenBank
Match: gi|585111783|gb|EWM29260.1| (hypothetical protein Naga_100029g20 [Nannochloropsis gaditana])

HSP 1 Score: 1166.76 bits (3017), Expect = 0.000e+0
Identity = 581/581 (100.00%), Postives = 581/581 (100.00%), Query Frame = 0 
Query:    1 MRNQDRERVESALRDSVEAQERLSRKFQHAVSTKLKVESQLRIARKIENVVDQGEVQQQPQQQQPPPPQKQPQQPQPQPQQQKQQSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQRRRRRRRRQRYVERLRSQKPKCAMEAQETTCTSVPNPGPNTCGYDDSRGKLSSTDSIARVELVEREAILRSLRARLRRQGQAQRMQLVEWESQLQLKEERICRVAEKLRKQRLNLRFLKYRAERQREKAMSKSIGKSSQIPSALSERKYVRTPAVDSESNLALNISIMHSNKDSKKESQEIRPASQICDKRAKFVGTHGKDEGNANLLASLDVSDSLTNLAREASLFFWKDKQRCQHLASGSASSRALDKNEDEVKPVIGTNGLRLFETESGGDIAEETIDMKELGRKRLSVSSDEAVEARHLISSKNAEYDIDEFRSQLYSTPTLPGTLSKESVLLSSVPKPVLPQLPSSVRDRLFTKQVSATIEKVRSAKSRVAEACTQAGIDVTIQKHSQKPLEAQHEQPDMKSRKGKHCGSIKTRRTSTSSQHNRLQWLSAFDGRFAKSLSTLEQLKS 581
            MRNQDRERVESALRDSVEAQERLSRKFQHAVSTKLKVESQLRIARKIENVVDQGEVQQQPQQQQPPPPQKQPQQPQPQPQQQKQQSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQRRRRRRRRQRYVERLRSQKPKCAMEAQETTCTSVPNPGPNTCGYDDSRGKLSSTDSIARVELVEREAILRSLRARLRRQGQAQRMQLVEWESQLQLKEERICRVAEKLRKQRLNLRFLKYRAERQREKAMSKSIGKSSQIPSALSERKYVRTPAVDSESNLALNISIMHSNKDSKKESQEIRPASQICDKRAKFVGTHGKDEGNANLLASLDVSDSLTNLAREASLFFWKDKQRCQHLASGSASSRALDKNEDEVKPVIGTNGLRLFETESGGDIAEETIDMKELGRKRLSVSSDEAVEARHLISSKNAEYDIDEFRSQLYSTPTLPGTLSKESVLLSSVPKPVLPQLPSSVRDRLFTKQVSATIEKVRSAKSRVAEACTQAGIDVTIQKHSQKPLEAQHEQPDMKSRKGKHCGSIKTRRTSTSSQHNRLQWLSAFDGRFAKSLSTLEQLKS
Sbjct:    1 MRNQDRERVESALRDSVEAQERLSRKFQHAVSTKLKVESQLRIARKIENVVDQGEVQQQPQQQQPPPPQKQPQQPQPQPQQQKQQSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQRRRRRRRRQRYVERLRSQKPKCAMEAQETTCTSVPNPGPNTCGYDDSRGKLSSTDSIARVELVEREAILRSLRARLRRQGQAQRMQLVEWESQLQLKEERICRVAEKLRKQRLNLRFLKYRAERQREKAMSKSIGKSSQIPSALSERKYVRTPAVDSESNLALNISIMHSNKDSKKESQEIRPASQICDKRAKFVGTHGKDEGNANLLASLDVSDSLTNLAREASLFFWKDKQRCQHLASGSASSRALDKNEDEVKPVIGTNGLRLFETESGGDIAEETIDMKELGRKRLSVSSDEAVEARHLISSKNAEYDIDEFRSQLYSTPTLPGTLSKESVLLSSVPKPVLPQLPSSVRDRLFTKQVSATIEKVRSAKSRVAEACTQAGIDVTIQKHSQKPLEAQHEQPDMKSRKGKHCGSIKTRRTSTSSQHNRLQWLSAFDGRFAKSLSTLEQLKS 581
The following BLAST results are available for this feature:
BLAST of EWM29260.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111783|gb|EWM29260.1|0.000e+0100.00hypothetical protein Naga_100029g20 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1405rna1405Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications