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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100013g86.9778.mrna |
| Orig protein id | gnl|cribi|Naga_100013g86.9778 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:357846..359869 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna137 ID=rna137|Name=rna137|organism=Nannochloropsis gaditana|type=mRNA|length=1938bp
TAGCCTACACCGCATTTCTTGAAGTTGAGAGCTGACAATCAAGACGAGCT
GGTGGATTTTGTTCATCGACATACGGTGAAGCGGATTTGTTCCGCTTGGA
TGGTTGCACCTTTTTCTATACACCATGTGGCCCATTTACCATCTGCCCTC
ATTCCAACAGGAGATTCGATCGAAAAAAAGAAAAGACACACGTGCCCGTC
CGAATATGGAAATCGTCAGTCTATTAACGTTTTTATCTGTAGTAGCTCTT
GGACCTTATCCAGCAGCTGCTGTAAACTACTTTACTGGCTTAGACTCATT
TGTCGCTATGAAAGCCTTGGGAATCACTGATGGCGCAGGCGTACTACAGA
AAAACACTCTTTTCTCCTTCTCCAACAGTGAATGCGTACACGACTTGCAC
GACATAGGGTTTCCTTTCATTTTCATGGATTTGCCCGGAGCAACTCACGA
GCTGGCAAACATACTTGTGGAAACGCCTCCAAATGAGCTCATGTCATTCT
TCAACGTCAGTGATTGCAAATCCTTCTACTCTTTTACTGCAGGCGATTCC
ATACATGACAAAGGTAATAAAATTGTCCCGTCTGATCAGGCGTCGTTGGA
AGATGCTTTTTGGCATGATCAAAGACTGCCCAACCTTCGCATTCGCAATG
ACTTGCAGCGTGTGGTAGACGTGTTCTGGGAGTTGCGAGACGGATCCTTG
ACAGAGTTTCGGGTCGTGAGACTTAACTCAGGCCAAGAAGAAAGGTTCCG
TTCTTTCTTGGGCGATATTTTCATTTTCCGGGACGCGTATGATGATATGC
GTCTCTTGGCCCGCACTGTCATCACGGACGGGAACAAACCTTTGATTTTG
TCTCAAACGCTGATGGGCAAGGGCGACACAGAAACTTTGCAATTGAATGA
GAACCAGGCCGATGTTTGGCGCGGTAGACAAAACACCAACGTAGCAAGAC
TTCGCCAGAATGAGCTGCAACCCTCTACCGTGAAGAAATACACAGGTGGG
GGGTTCAAGAAGATGCTTATGCCCTCCTATCTTCATACAAGGCTCTTGGA
ATATCTGGCGCGACATGAAGACCAGCGTATGGATGAACCATGGCACAAGG
ACGACTTGCACGTCAATTTCTACGAAAAAATGACAACTATCGTTTACACA
GATCGAGACATGCGCGACATTGTATTCAAGACCCTGAAACCCATTTTGGA
ATCTTGGGTAGGCGGGGAGAAACTCATGCCAACAAGCACCTACGGAATAC
GACGATACTACAATGGAAGCATCTTGCGGGACCATGTTGACATTGGACGC
ACGCACATTGTGTCTGCCATCCTCAACGTACGACAAGATGTGGATGAAGT
ATGGCCGCTGAGCATTTTGGATCACCAAGGACGCCGGCATTTCATTAACA
TGGCTCCGGGGGAAATGTGTCTTTATGAGAGCGCAACGGCCCTGCATGGG
CGAACGCAAGCCCTGCGGGGAAGATATTTCGATAATCTTTTCGCACATTT
CGCTCCCGCAGCTCCTTTCACGGTTAATGCATCAAATAAATCCGATAAGT
AATTATGCATGATCGGGCAGAAAGTAGATGAATAGGATGGGAACAAGCTC
GGCAGGAAGCGGAGTTGATGAAAGCGACATGAGAAACAGATTGTCTAAGA
CACATAACAATATGAATGCTTGTAGAGGTGAAGCAGTGCAGTATGTCGAG
AAAACTGACAAGAAATTGTTTACCGAAGAAACATGAATGAAATGGCGATT
ACGAGGCACATATTACAAATTTTGGGAGTGTTTTGAGATGATTTTGTCGG
AGACACAAAACAATGTATAGAGATCTCTGCAGTATGTCGAAAAAACAGAG
AGAAATGATTATCAATACTTCGCTGGGATAAGAAAAAAAAGTTTTGGGGT
TCAAATGAGACCTGCCGTTGCATGCACATGATCAGTTT back to topprotein sequence of rna137 >rna137-protein ID=rna137-protein|Name=rna137|organism=Nannochloropsis gaditana|type=polypeptide|length=518bp
MKSQNKGRRIRLSMAPEDGRAAQAHNGIHHIPGAGINNIAQMRGPRKSQE
IRRASALQDRRRYADIVLLSTVVLLSSSTAFTTAFVMKSVPPKTSVDLRP
GLPTCAMVSSIAAENTLVKASMPLSTGPIPQKETILKLGTDGLERVLEGK
GRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLGPQWTLV
QRTSSTCGTLKLLVRLHDGLMVETVVIPARLGPRSNGLARGMSGEAEDSL
ALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSIDEILMQVQLALQKV
RAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLST
VAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFR
EVMAQRGDTYIFIEVTLIEGVNDSLDDAEALVELLRPFGRTAVKVNLIPY
NDTGVNGWMPSPPGNILAFQTYVRTHGGWLTFARTPRGREESSACGQLAT
GFSGQPQEKMLKAQALKS back to topmRNA from alignment at CM002455.1:357846..359869- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna137 ID=rna137|Name=rna137|organism=Nannochloropsis gaditana|type=mRNA|length=2024bp|location=Sequence derived from alignment at CM002455.1:357846..359869- (Nannochloropsis gaditana)
AACAAGCACACGTTCACATTAAAAGTGTGGTTTTGCGTTATGGTACATTT
ATTCAATGAAATCTAGAAGCGTTATAATCTCAAAGAGTTCTTATTTGTCT
GGCTGCTGCATAGCTGGTGAGAGCTGGTCTGGAAGCCCCCTGCCCTCTTC
TAAGCTACAAATATCGCATTCAAAATACCATTTTCAGTCATCATCCGCGA
GCTTTCTTTCACTTCCAGAAACCACATTCACCCATATCTTTCCTTCATAG
TACTGCTTTTGGTCAATGAAGAGTCAAAACAAAGGACGAAGGATACGGTT
ATCCATGGCCCCTGAGGACGGGAGAGCGGCCCAAGCACATAATGGCATAC
ACCATATACCAGGCGCAGGCATAAATAACATTGCCCAAATGCGAGGCCCG
AGGAAATCTCAAGAGATAAGGAGAGCAAGTGCGCTTCAGGATCGGCGCAG
GTATGCCGACATCGTGCTGCTGTCCACAGTTGTGCTGCTTAGCTCCTCAA
CAGCTTTCACGACAGCTTTCGTCATGAAATCAGTGCCTCCAAAAACTTCG
GTTGATTTACGCCCTGGACTCCCTACCTGTGCCATGGTCTCTTCAATTGC
GGCAGAGAACACACTGGTAAAAGCTTCTATGCCTCTTTCAACCGGCCCCA
TTCCTCAAAAAGAGACCATCTTGAAGCTGGGCACCGACGGCTTGGAAAGA
GTATTGGAGGGTAAGGGGAGGGCGCGAATGGTATGGCGTGCTGTCCGGGA
AGGCCTTGATCCACATGAAACGGATCCAGCTTCGCCTATGTTCGACAGCC
GCATTACCAGCAGGACCCGGGCGATACTCCAAGAGCGCGTCCTTGGCCCT
CAATGGACCTTGGTGCAGAGGACAAGTAGCACGTGCGGGACGCTCAAGTT
GTTGGTTCGATTGCACGATGGACTGATGGTGGAGACCGTGGTTATTCCTG
CGCGCTTGGGCCCTCGGTCCAACGGCCTTGCCAGGGGGATGAGCGGGGAG
GCAGAGGATTCCTTGGCGCTGGCGTCTCGTTCCACCGTGTGTGTGAGCTC
CCAGGTCGGCTGTGCCCAAGCCTGTGCCTTTTGTCTAACAGGGACCATGG
GATTTGTCCGACACTTGAGCATCGACGAAATCCTGATGCAGGTGCAGTTG
GCCTTGCAGAAAGTACGCGCGGAGGGGCTTCCCGGGCTACGGAACGTGGT
GTTCATGGTGAGGATAAGCCGGTGGCGGACAGAGGGGGGGAGGATCAGGA
CACATGTGCTTCGATGGTAAAGCTTGCTCACGCATATGATTCTCTTGTCA
AACGCGATAACGTGAACAGGGCATGGGGGAGCCGCTGAATAACCATCGCG
CTGTCAGGCACGCCTTGGCATGCATGACCGATCCACACGCTTTCGCCCTC
TCCCCTTCTTTTATCACCCTCTCGACCGTCGCACCGTCTCCTGGACACGT
ACGGCATTTCCTTGATATGCCTAAAATTAGACTGGCTTGGTCCGTTCATG
GCGCCGCGGATGGCTTACGCCGAACATTGGTGCCTACAACTAGTTCGAGT
ATGGTGGAGCTGCGGGAAGCGTTTCGAGAGGTGATGGCTCAGCGCGGGGA
TACGTATATTTTCATAGAAGTGACCTTGATAGAAGGAGTAAATGACTCTT
TGGATGATGCTGAGGCTCTGGTGGAATTGTTGAGGCCTTTTGGCAGGACT
GCCGTTAAAGTGAATCTTATCCCTTACAATGACACTGGCGTCAATGGCTG
GATGCCTTCTCCCCCGGGAAACATTTTGGCATTCCAGACGTATGTACGGA
CTCATGGCGGGTGGCTAACATTTGCACGCACTCCTAGAGGAAGGGAGGAG
TCCAGCGCTTGTGGACAACTGGCTACCGGCTTCTCTGGACAACCTCAGGA
AAAGATGTTGAAAGCTCAGGCCCTAAAGAGCTGATTTCCTCGGGCAAATT
ATAGTCCGTCAGTTAGTGTACAGTGAAAGGAAAGTAACCATGTGCAGCGC
AACAAATCACAAATAGTTTGCATG back to topCoding sequence (CDS) from alignment at CM002455.1:357846..359869- >rna137 ID=rna137|Name=rna137|organism=Nannochloropsis gaditana|type=CDS|length=3114bp|location=Sequence derived from alignment at CM002455.1:357846..359869- (Nannochloropsis gaditana)
GGCATGGGGGAGCCGCTGAATAACCATCGCGCTGTCAGGCACGCCTTGGC
ATGCATGACCGATCCACACGCTTTCGCCCTCTCCCCTTCTTTTATCACCC
TCTCGACCGTCGCACCGTCTCCTGGACACGTACGGCATTTCCTTGATATG
CCTAAAATTAGACTGGCTTGGTCCGTTCATGGCGCCGCGGATGGCTTACG
CCGAACATTGGTGCCTACAACTAGTTCGAGTATGGTGGAGCTGCGGGAAG
CGTTTCGAGAGGTGATGGCTCAGCGCGGGGATACGTATATTTTCATAGAA
GTGACCTTGATAGAAGGAGTAAATGACTCTTTGGATGATGCTGAGGCTCT
GGTGGAATTGTTGAGGCCTTTTGGCAGGACTGCCGTTAAAGTGAATCTTA
TCCCTTACAATGACACTGGCGTCAATGGCTGGATGCCTTCTCCCCCGGGA
AACATTTTGGCATTCCAGACGTATGTACGGACTCATGGCGGGTGGCTAAC
ATTTGCACGCACTCCTAGAGGAAGGGAGGAGTCCAGCGCTTGTGGACAAC
TGGCTACCGGCTTCTCTGGACAACCTCAGGAAAAGATGTTGAAAGCTCAG
GCCCTAAAGAGCTGAATGAAGAGTCAAAACAAAGGACGAAGGATACGGTT
ATCCATGGCCCCTGAGGACGGGAGAGCGGCCCAAGCACATAATGGCATAC
ACCATATACCAGGCGCAGGCATAAATAACATTGCCCAAATGCGAGGCCCG
AGGAAATCTCAAGAGATAAGGAGAGCAAGTGCGCTTCAGGATCGGCGCAG
GTATGCCGACATCGTGCTGCTGTCCACAGTTGTGCTGCTTAGCTCCTCAA
CAGCTTTCACGACAGCTTTCGTCATGAAATCAGTGCCTCCAAAAACTTCG
GTTGATTTACGCCCTGGACTCCCTACCTGTGCCATGGTCTCTTCAATTGC
GGCAGAGAACACACTGGTAAAAGCTTCTATGCCTCTTTCAACCGGCCCCA
TTCCTCAAAAAGAGACCATCTTGAAGCTGGGCACCGACGGCTTGGAAAGA
GTATTGGAGGGTAAGGGGAGGGCGCGAATGGTATGGCGTGCTGTCCGGGA
AGGCCTTGATCCACATGAAACGGATCCAGCTTCGCCTATGTTCGACAGCC
GCATTACCAGCAGGACCCGGGCGATACTCCAAGAGCGCGTCCTTGGCCCT
CAATGGACCTTGGTGCAGAGGACAAGTAGCACGTGCGGGACGCTCAAGTT
GTTGGTTCGATTGCACGATGGACTGATGGTGGAGACCGTGGTTATTCCTG
CGCGCTTGGGCCCTCGGTCCAACGGCCTTGCCAGGGGGATGAGCGGGGAG
GCAGAGGATTCCTTGGCGCTGGCGTCTCGTTCCACCGTGTGTGTGAGCTC
CCAGGTCGGCTGTGCCCAAGCCTGTGCCTTTTGTCTAACAGGGACCATGG
GATTTGTCCGACACTTGAGCATCGACGAAATCCTGATGCAGGTGCAGTTG
GCCTTGCAGAAAGTACGCGCGGAGGGGCTTCCCGGGCTACGGAACGTGGT
GTTCATGGGCATGGGGGAGCCGCTGAATAACCATCGCGCTGTCAGGCACG
CCTTGGCATGCATGACCGATCCACACGCTTTCGCCCTCTCCCCTTCTTTT
ATCACCCTCTCGACCGTCGCACCGTCTCCTGGACACGTACGGCATTTCCT
TGATATGCCTAAAATTAGACTGGCTTGGTCCGTTCATGGCGCCGCGGATG
GCTTACGCCGAACATTGGTGCCTACAACTAGTTCGAGTATGGTGGAGCTG
CGGGAAGCGTTTCGAGAGGTGATGGCTCAGCGCGGGGATACGTATATTTT
CATAGAAGTGACCTTGATAGAAGGAGTAAATGACTCTTTGGATGATGCTG
AGGCTCTGGTGGAATTGTTGAGGCCTTTTGGCAGGACTGCCGTTAAAGTG
AATCTTATCCCTTACAATGACACTGGCGTCAATGGCTGGATGCCTTCTCC
CCCGGGAAACATTTTGGCATTCCAGACGTATGTACGGACTCATGGCGGGT
GGCTAACATTTGCACGCACTCCTAGAGGAAGGGAGGAGTCCAGCGCTTGT
GGACAACTGGCTACCGGCTTCTCTGGACAACCTCAGGAAAAGATGTTGAA
AGCTCAGGCCCTAAAGAGCTGAATGAAGAGTCAAAACAAAGGACGAAGGA
TACGGTTATCCATGGCCCCTGAGGACGGGAGAGCGGCCCAAGCACATAAT
GGCATACACCATATACCAGGCGCAGGCATAAATAACATTGCCCAAATGCG
AGGCCCGAGGAAATCTCAAGAGATAAGGAGAGCAAGTGCGCTTCAGGATC
GGCGCAGGTATGCCGACATCGTGCTGCTGTCCACAGTTGTGCTGCTTAGC
TCCTCAACAGCTTTCACGACAGCTTTCGTCATGAAATCAGTGCCTCCAAA
AACTTCGGTTGATTTACGCCCTGGACTCCCTACCTGTGCCATGGTCTCTT
CAATTGCGGCAGAGAACACACTGGTAAAAGCTTCTATGCCTCTTTCAACC
GGCCCCATTCCTCAAAAAGAGACCATCTTGAAGCTGGGCACCGACGGCTT
GGAAAGAGTATTGGAGGGTAAGGGGAGGGCGCGAATGGTATGGCGTGCTG
TCCGGGAAGGCCTTGATCCACATGAAACGGATCCAGCTTCGCCTATGTTC
GACAGCCGCATTACCAGCAGGACCCGGGCGATACTCCAAGAGCGCGTCCT
TGGCCCTCAATGGACCTTGGTGCAGAGGACAAGTAGCACGTGCGGGACGC
TCAAGTTGTTGGTTCGATTGCACGATGGACTGATGGTGGAGACCGTGGTT
ATTCCTGCGCGCTTGGGCCCTCGGTCCAACGGCCTTGCCAGGGGGATGAG
CGGGGAGGCAGAGGATTCCTTGGCGCTGGCGTCTCGTTCCACCGTGTGTG
TGAGCTCCCAGGTCGGCTGTGCCCAAGCCTGTGCCTTTTGTCTAACAGGG
ACCATGGGATTTGTCCGACACTTGAGCATCGACGAAATCCTGATGCAGGT
GCAGTTGGCCTTGCAGAAAGTACGCGCGGAGGGGCTTCCCGGGCTACGGA
ACGTGGTGTTCATG back to top
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