EWM30490.1, cds137 (CDS) Nannochloropsis gaditana

Overview
NameEWM30490.1
Unique Namecds137
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:358663..359604 -
Alignment locationCM002455.1:357936..358550 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30490.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100013g86.9778.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:358663..359604 -
CM002455.1supercontigCM002455.1:357936..358550 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016740transferase activity
GO:0008173RNA methyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR004383rRNA_lsu_MTrfase_RlmN/Cfr
IPR023404rSAM_horseshoe
Homology
BLAST of EWM30490.1 vs. NCBI_GenBank
Match: gi|585113154|gb|EWM30490.1| (hypothetical protein Naga_100013g86 [Nannochloropsis gaditana])

HSP 1 Score: 1061.21 bits (2743), Expect = 0.000e+0
Identity = 518/518 (100.00%), Postives = 518/518 (100.00%), Query Frame = 0
Query:    1 MKSQNKGRRIRLSMAPEDGRAAQAHNGIHHIPGAGINNIAQMRGPRKSQEIRRASALQDRRRYADIVLLSTVVLLSSSTAFTTAFVMKSVPPKTSVDLRPGLPTCAMVSSIAAENTLVKASMPLSTGPIPQKETILKLGTDGLERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLGPQWTLVQRTSSTCGTLKLLVRLHDGLMVETVVIPARLGPRSNGLARGMSGEAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSIDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGDTYIFIEVTLIEGVNDSLDDAEALVELLRPFGRTAVKVNLIPYNDTGVNGWMPSPPGNILAFQTYVRTHGGWLTFARTPRGREESSACGQLATGFSGQPQEKMLKAQALKS 518
            MKSQNKGRRIRLSMAPEDGRAAQAHNGIHHIPGAGINNIAQMRGPRKSQEIRRASALQDRRRYADIVLLSTVVLLSSSTAFTTAFVMKSVPPKTSVDLRPGLPTCAMVSSIAAENTLVKASMPLSTGPIPQKETILKLGTDGLERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLGPQWTLVQRTSSTCGTLKLLVRLHDGLMVETVVIPARLGPRSNGLARGMSGEAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSIDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGDTYIFIEVTLIEGVNDSLDDAEALVELLRPFGRTAVKVNLIPYNDTGVNGWMPSPPGNILAFQTYVRTHGGWLTFARTPRGREESSACGQLATGFSGQPQEKMLKAQALKS
Sbjct:    1 MKSQNKGRRIRLSMAPEDGRAAQAHNGIHHIPGAGINNIAQMRGPRKSQEIRRASALQDRRRYADIVLLSTVVLLSSSTAFTTAFVMKSVPPKTSVDLRPGLPTCAMVSSIAAENTLVKASMPLSTGPIPQKETILKLGTDGLERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLGPQWTLVQRTSSTCGTLKLLVRLHDGLMVETVVIPARLGPRSNGLARGMSGEAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSIDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGDTYIFIEVTLIEGVNDSLDDAEALVELLRPFGRTAVKVNLIPYNDTGVNGWMPSPPGNILAFQTYVRTHGGWLTFARTPRGREESSACGQLATGFSGQPQEKMLKAQALKS 518          
BLAST of EWM30490.1 vs. NCBI_GenBank
Match: gi|298708530|emb|CBJ49163.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 317.39 bits (812), Expect = 4.521e-100
Identity = 183/366 (50.00%), Postives = 231/366 (63.11%), Query Frame = 0
Query:  135 ILKLGTDGLERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLGPQWTLVQRTSSTCGTLKLLVRLHDGLMVETVVIPARLGPRSNGLARGMSGEAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSIDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGDTYIFIEVTLIEGVNDSLDDAEALVELLRPFGRTAVKVNLIPYNDTGVNGWMPSPPGNILAFQTYVRTHGGWLTFARTPRGREESSACGQLAT 500
            +L L  D L ++L G GRA+MVW A+  G+DP   D A       +T +T A+L++ V    W +V+ + S+CGT KLLV+L DGL VETVVIP             +SG         SRSTVCVSSQ+GCA+ C FC+TG MG VR+L+  EIL QV  A + VR  G+P L N V+MGMGEPL+N  AV  +L  +T P AFA++ S I++STV PSP  +R    MP  RLAWSVH A D +RR LVPTT  SM ELR+AF EV+  R   ++F+EV LIEG+NDS + A AL  LLRP    A  +NL+PYNDTG   +  SP  ++  FQ  V T  G++   RT RG EESSACGQLAT
Sbjct:   64 LLSLNFDELSQILGGSGRAKMVWSALSAGVDPF-GDAAE-----FLTDKTAAVLKDTVERLPWQVVRESVSSCGTRKLLVQLEDGLEVETVVIP------------DLSG---------SRSTVCVSSQIGCAKNCQFCMTGKMGLVRNLTAGEILGQVFFARETVREHGMPPLTNAVYMGMGEPLDNPGAVTQSLQVLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPS-RLAWSVHAATDDVRRLLVPTTVHSMAELRDAFAEVLQSRRREHLFVEVVLIEGMNDSPELARALASLLRPLPIRA-GINLLPYNDTGHPFFRASPKESVEEFQ-RVLTQEGFVATIRTARGDEESSACGQLAT 399          
BLAST of EWM30490.1 vs. NCBI_GenBank
Match: gi|873227013|emb|CEM19671.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 286.574 bits (732), Expect = 5.521e-88
Identity = 170/380 (44.74%), Postives = 222/380 (58.42%), Query Frame = 0
Query:  135 ILKLGTDGLERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLGPQWTLVQRTSSTCGTLKLLVRLHDGLMVETVVIPARLGPRSNGLARGMSGEAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSIDEILMQVQLALQKVRAEG--LPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGDTY------------IFIEVTLIEGVNDSLDDAEALVELLRPFGRTAVKVNLIPYNDTGVNGWMPSPPGNILAFQTYVRTHGGWLTFARTPRGREESSACGQLAT 500
            +L L  + L   + G GRAR +W A+R+G  P + D ++   +  ++ R    L E      + ++  T S CGT+KLLVRL DG  VETV+IP+  G                       ST+CVSSQ+GCA+AC FC TG MG +R+L  DEIL QV  A + VR      P +RN VFMGMGEPLNN RAVR A+  MTDP AF L  S IT+STV PSP  +R   D+P + +AWSVH A D +RR LVPTT   M +LR+AF +++  R + +            I +E TL++G+NDS +DAEALVEL+R       KVNL+PYND GV G+  SP   + A+   VR  GG +   R  RG E+ +ACGQLAT
Sbjct:   87 LLSLSVEELASSVGGTGRARRIWEALRKGQLPIDIDDST---EKPLSHRALTRLLEATQLLPYEVINETVSACGTVKLLVRLRDGHGVETVIIPSEKG----------------------HSTLCVSSQIGCARACRFCKTGQMGLMRNLGADEILAQVFFAHRWVRESDGRTPPIRNAVFMGMGEPLNNPRAVRRAIQTMTDPFAFGLGRSHITVSTVGPSPASIRLLEDIP-VHIAWSVHAARDNVRRLLVPTTVHPMTDLRDAFADMLIARSNKHQGPGRFPKRYLNIMVECTLLDGLNDSREDAEALVELVRGLPGEP-KVNLLPYNDIGVPGYRRSPEAKVAAYLECVR-EGGVMCSVRRARGDEDMAACGQLAT 438          
BLAST of EWM30490.1 vs. NCBI_GenBank
Match: gi|1210522514|dbj|GAX18527.1| (hypothetical protein FisN_10Hh273 [Fistulifera solaris])

HSP 1 Score: 265.003 bits (676), Expect = 2.945e-80
Identity = 168/396 (42.42%), Postives = 216/396 (54.55%), Query Frame = 0
Query:  115 NTLVKASMPLSTGPIPQKETILKLGTDGLERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLGPQWTLVQRTSSTCGTLKLLVRLHDGLMVETVVIPARLGPRSNGLARGMSGEAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSIDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGD--TYIFIEVTLIEGVNDSLDDAEALVELLRPFGR---TAVKVNLIPYND----TGVNGWMPSP-PGNILAFQTYVRTHGGWLTFARTPRGREESSACGQLAT 500
            N L   ++P +T P P   + L L  D L   L GKGRA+  W A R G DP     A      R+  R   +          TL  +T+   GT KLL++L DGL VETV+IP    P                     RSTVC+SSQVGC QAC FCLTG MG +R+LS DEI+ QV  A + V ++ +P + N+VFMG+GEP +N  AV  A  C+TDPH FAL+P  +T+STVAP+P         P + LAWSVH   D LR+ LVPTT  SM ELR+     + QR      I +E+TL++ +ND+++DA+ LVE  +P        V VNLIP+ND    TG       P P  I AFQ Y+   G    F RT RG +E +ACGQL+T
Sbjct:   28 NGLSAVTLP-TTTPRPSSRSPLSLTLDELSVQLGGKGRAQACWEAYRSGTDPILGTEAQ----QRLLQRPADVA---------TLHHQTTCHDGTTKLLLQLPDGLQVETVIIP---WPERQ------------------RSTVCISSQVGCRQACTFCLTGRMGLLRNLSCDEIVSQVYWAQRVVHSKEMPPIDNIVFMGLGEPADNVDAVVAAAECLTDPHRFALTPRRVTISTVAPTPDAFAKLGRAPAV-LAWSVHATRDVLRKQLVPTTRYSMTELRDGLVSTLVQRSKRRRNILLEITLLDQINDTIEDAQHLVEFCQPLVAIPGVRVIVNLIPWNDIQVQTGAAAQYRQPSPERIEAFQQYLVQQGNLRCFIRTTRGDDELAACGQLST 387          
BLAST of EWM30490.1 vs. NCBI_GenBank
Match: gi|1210515992|dbj|GAX25077.1| (23S rRNA (adenine2503-C2)-methyltransferase [Fistulifera solaris])

HSP 1 Score: 259.225 bits (661), Expect = 4.737e-78
Identity = 166/388 (42.78%), Postives = 209/388 (53.87%), Query Frame = 0
Query:  123 PLSTGPIPQKETILKLGTDGLERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLGPQWTLVQRTSSTCGTLKLLVRLHDGLMVETVVIPARLGPRSNGLARGMSGEAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSIDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGD--TYIFIEVTLIEGVNDSLDDAEALVELLRPFGRTA---VKVNLIPYND----TGVNGWMPSP-PGNILAFQTYVRTHGGWLTFARTPRGREESSACGQLAT 500
            P ST P+    + L L  D L   L GKGRA+  W A R G DP     A      R+  R   +          TL  +T+   GT KLL++L D L VETV+IP    P                     RSTVC+SSQVGC QAC FCLTG MG +R+LS DEI+ QV  A + V+   +  + NVVFMG+GEP +N  AV  A  C+TDPH FA++P  +T+STVAP+P         P + LAWSVH   D LR+ LVPTT  SM ELRE     + QR      I +E+TL++ +NDS++DA+ LVE  +P        V VNLIP+ND    TG       P P  I AFQ Y+   G    F RT RG +E +ACGQL+T
Sbjct:   38 PSSTTPL----SPLSLTLDELSLQLGGKGRAQACWEAYRSGTDPILGTEAQ----QRLLQRPPDVA---------TLHHQTTCHDGTTKLLLQLPDNLQVETVIIP---WPERQ------------------RSTVCISSQVGCRQACTFCLTGRMGLLRNLSCDEIVSQVYWAQRVVKTTAMLPIENVVFMGLGEPADNVDAVVAAAECLTDPHRFAMTPRRVTISTVAPTPDAFAKLNRAPAV-LAWSVHATRDALRKQLVPTTKYSMTELREGLVSTLEQRSKRRRNILLEITLLDQINDSIEDAQHLVEFCQPLVAIPGVRVIVNLIPWNDIQVQTGAAAQYRKPSPERIEAFQHYLIQQGNLRCFIRTTRGDDELAACGQLST 386          
BLAST of EWM30490.1 vs. NCBI_GenBank
Match: gi|551637361|ref|XP_005821499.1| (hypothetical protein GUITHDRAFT_119263 [Guillardia theta CCMP2712] >gi|428165527|gb|EKX34519.1| hypothetical protein GUITHDRAFT_119263 [Guillardia theta CCMP2712])

HSP 1 Score: 250.366 bits (638), Expect = 2.989e-74
Identity = 145/380 (38.16%), Postives = 210/380 (55.26%), Query Frame = 0
Query:  132 KETILKLGTDGLERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLGPQWTLVQRTSSTCGTLKLLVRLHDGLMVETVVIPARLGPRSNGLARGMSGEAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSIDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGDTYI-FIEVTLIEGVNDSLDDAEALVELLRPFGR--TAVKVNLIPYNDTGVNGWMPSPPGNILAFQTYVRTHGGWLTFARTPRGREESSACGQLATGFSGQPQE 508
            K  +L    D L ++++G GRA  VW+ +R+G++         + D ++       L ++   P   + + T S+CGT KLL+ L DG  VETV+IP+        L  G            SR+T+CVSSQVGCA+ C FC TG +G    L  DEILMQV   L+ +R E LP   ++VFMGMGEPLNN + V+ A+  +T   AF + P+ +T+STV P+P  +R     P  R+AWS+H A D +R+ LVPT + + V LR+AF EV+  R    +  IE+TL++G+NDS   A  LVE  +P+      +K+NL+P N  G     PS P   L F+  +    G +   R  RG  + SACGQL+   +  P++
Sbjct:   42 KWNLLLTKPDDLSKLMQGPGRAETVWKKLRQGIEE--------IHDIQVNPIIVEALCKKCYIPSIDVKKVTLSSCGTRKLLIALEDGQSVETVLIPS-----PEHLESG-----------KSRTTICVSSQVGCARGCVFCATGRLGLRGQLEADEILMQVFHGLRVIREENLPAKVSIVFMGMGEPLNNFKEVQRAIEMLTLQDAFRIHPNAVTISTVGPNPDAIRKLAQCP-TRIAWSLHAADDEVRKRLVPTHTHTAVALRDAFMEVILARDKKLMPLIEITLVDGINDSEKHARDLVEFFKPWRELGIKIKINLLPCNSIGDPELRPSHPETTLKFRNLL-VQEGCVAIIRRARGDADGSACGQLSAEMTPLPKQ 395          
BLAST of EWM30490.1 vs. NCBI_GenBank
Match: gi|551640992|ref|XP_005823299.1| (hypothetical protein GUITHDRAFT_90026 [Guillardia theta CCMP2712] >gi|428167358|gb|EKX36319.1| hypothetical protein GUITHDRAFT_90026 [Guillardia theta CCMP2712])

HSP 1 Score: 246.128 bits (627), Expect = 3.313e-73
Identity = 147/378 (38.89%), Postives = 212/378 (56.08%), Query Frame = 0
Query:  143 LERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLG-PQWTLVQRTSSTCGTLKLLVRLHDGLMVETVVIPARLGPRSNGLARGMSGEAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSIDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGDTYIFIEVTLIEGVNDSLDDAEALVELLRP-------------------FGRTAVKVNLIPYNDTGVNGWMPSPPGNILAFQTYVRTHGGWLTFARTPRGREESSACGQLAT 500
            L  +L G G+A++VW ++R G DP          D  +T + R  L+E     P+ + V R S  CGT+KLL+ + DG+ +E+VVIP    P +  +             +  R+T+CVSSQVGC +AC+FC TG MGF+R L+  EIL QV +AL+ ++ E LP L N+VFMGMGEPLNN     +A   +TD + F ++ + +T+S+V PSP  +R    +P + LAWSVH A D  R  LVPTT+++MVELR+        +G+    + VTLI+G+NDS++ A+ L++LL P                        V V+LIPYND G      +PP ++           G+  F R  RG ++S+ACGQLAT
Sbjct:   30 LGELLGGTGKAKLVWASIRAGRDP--------WTDETVTEKARKKLKENFQEIPRVSHVTRAS--CGTIKLLIAMQDGMEIESVVIPHEGRPTAASV-------------VEPRTTLCVSSQVGCNRACSFCATGKMGFIRQLTSHEILSQVYIALRCIKEENLPPLHNIVFMGMGEPLNN---FVNACEVLTDQNCFQMAKNRVTVSSVGPSPAVIRAAAGIPAM-LAWSVHAADDTTRSKLVPTTANTMVELRD--------QGERMTSVAVTLIDGINDSVEQADQLMKLLTPLLEQGPALMPAESLLRFHVLAGLKVCVDLIPYNDIGTEDC--TPPADVHLQVPAAHHERGFACFVRVTRGDDQSAACGQLAT 370          
BLAST of EWM30490.1 vs. NCBI_GenBank
Match: gi|1084846006|gb|OGQ77636.1| (hypothetical protein A2289_06300 [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15] >gi|1084882868|gb|OGR09856.1| hypothetical protein A2341_14215 [Deltaproteobacteria bacterium RIFOXYB12_FULL_58_9])

HSP 1 Score: 236.113 bits (601), Expect = 7.503e-70
Identity = 145/358 (40.50%), Postives = 202/358 (56.42%), Query Frame = 0
Query:  143 LERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLGPQWTLVQRTSSTCGTLKLLVRLHDGLMVETVVIPARLGPRSNGLARGMSGEAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSIDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGDTYIFIEVTLIEGVNDSLDDAEALVELLRPFGRTAVKVNLIPYNDTGVNGWMPSPPGNILAF-QTYVRTHGGWLTFARTPRGREESSACGQLA 499
            L  +L G GRA+ VWRA+  G DP    P +      ++ R R  L  R       L ++T +  GTLK LV L DG  +E VVIP       NG                 R+TVCVS+QVGC +AC+FC+T  +G  R LS  EI+ QV+LA +  +   +P LRNVVFMGMGEPL+N  AV+  +A + D +  ++ P  ITLSTV  +P  +    D+P + +AWS+H A D LR  LVPT   ++++LR+AF  V+  R +  +F+E+ LI G+ND +  AE L + L PFG   V++NL+P N  G     PS P ++ A+ QT +    G+    R PRG   ++ACGQLA
Sbjct:    6 LGEMLGGSGRAKQVWRALLRGDDPFA--PGA------LSERARLKLVGRCRPTSAALGKQTVADDGTLKALVELEDGNAIEMVVIP------KNG-----------------RTTVCVSTQVGCKRACSFCVTALVGLRRSLSAAEIVFQVELARRMSQERKMPPLRNVVFMGMGEPLDNLDAVKQGVAVLCDQNGLSIPPRHITLSTVGTTPTKIWSLKDLP-VSVAWSLHTADDELRHKLVPTMRHALIDLRDAFVRVVQNR-NALLFVEMALIAGINDDIQSAEKLADFLVPFGDN-VRINLLPLN-PGRGDLAPSQPESVGAYRQTLIER--GYFCILRQPRGLGANAACGQLA 326          
BLAST of EWM30490.1 vs. NCBI_GenBank
Match: gi|551545732|ref|XP_005760835.1| (hypothetical protein EMIHUDRAFT_217562 [Emiliania huxleyi CCMP1516] >gi|485609405|gb|EOD08406.1| hypothetical protein EMIHUDRAFT_217562 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 235.728 bits (600), Expect = 8.371e-69
Identity = 151/351 (43.02%), Postives = 192/351 (54.70%), Query Frame = 0
Query:  156 VWRAVREGLDPHE----TDPASPMFDSRITSRTRAILQERVLGPQWTLVQRTSSTCGTLKLLVRLHDGLMVETVVIPARLGPRSNGLARGMSGEAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSIDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGDTY--IFIEVTLIEGVNDSLDDAEALVELLRPFGRTAVKVNLIPYNDTGVNGWMPSPPGNILAFQTYVRTHGGWLTFARTPRGREESSACGQLAT 500
            VW  +R+G+DP      T+ +  ++   +  R  A       G    +   + ++ GT KLL+RL DGL VE V+IP             M G    SL        C+SSQVGC++ C FC TGTMG +R+L  +EIL QV LAL+ +R   LP L NVVFMGMGEPLNN   VR A+  +  P AFALS   + +STV PSP H+R   +    RLAWSVH A D LR+TLVPTT  SM ELR+AF   +A +      + +E+ L+EG +     AE L  LL PFGR  V  NLIPYN  G+          + AFQ  +  H    T  R  RG +E SACGQLAT
Sbjct:   67 VWSLLRKGVDPRSEGELTEWSPNLYSPSLRRRLEADCGPVCAG---AVSDSSIASDGTQKLLLRLEDGLAVECVLIP-------------MVGGKTTSL--------CISSQVGCSRGCTFCSTGTMGLLRNLRAEEILAQVWLALRTIRQRRLPPLVNVVFMGMGEPLNNLDEVRRAVELLVHPKAFALSARCVCVSTVGPSPAHIRRAAEALPCRLAWSVHAADDALRKTLVPTTRHSMGELRDAFLASLATKPARLRGLVVELALLEGAH-----AEQLAALLHPFGRGMVLANLIPYNYNGL---------AVHAFQQRLWEHKLLCTI-RETRGDDERSACGQLAT 378          
BLAST of EWM30490.1 vs. NCBI_GenBank
Match: gi|1210522526|dbj|GAX18539.1| (hypothetical protein FisN_10Hu260 [Fistulifera solaris])

HSP 1 Score: 232.261 bits (591), Expect = 1.155e-67
Identity = 156/414 (37.68%), Postives = 210/414 (50.72%), Query Frame = 0
Query:  120 ASMPLSTGPIPQKETILKLGTDGLERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQE--------------------------RVLGPQWTLVQRTSSTCGTLKLLVRLHDGLMVETVVIPARLGPRSNGLARGMSGEAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSIDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQR---GDTYIFIEVTLIEGVNDSLDDAEALVELLRPFGRTA----VKVNLIPYNDTGVNGWMPSPPGNILAFQTYVRTHGGWLTFARTPRGREESSACGQLAT 500
            A++  + GPI        +G + L + L G GRAR+VW     G+DP      +  FD    + +   +Q+                          R+ G   +L   + S   T KLL+RL DGL VETV+IP               G+        +RSTVC+SSQVGC Q C FC TG MG +R L+ DEI+ Q   A +  R   LP +RNVVFMGMGEP +N   V  A   +T    F LS   +T+STVAP+P   + F+  P + LAWSVH A + LR+ LVPTT  SM ELR+   + + QR       + +EV L++GVNDSL +A+ L E  R          + VNLIP+ND G + +       ++AFQ  +  H G  T  R  RG +ES+ACGQLAT
Sbjct:   11 ATVSTTRGPI-------SMGVEELAQQLGGLGRARLVWDYYSIGIDP------AVYFDDSCETESIETIQKLLPSSRRSQPLGKEALDRLSSLYPAGRLEGGVASLSHISQSRDKTTKLLLRLADGLEVETVIIPW--------------GD--------TRSTVCISSQVGCRQGCTFCATGRMGKMRSLTSDEIIAQFFFAKKISRTHHLPEIRNVVFMGMGEPADNAENVVRATQILTTRELFQLSAMKVTVSTVAPTPDAFQQFVHAPCV-LAWSVHAANNELRKKLVPTTQYSMEELRQGLIDTLLQRPMNNFRVVMLEVALMDGVNDSLKEADELAEFARVLVEQVPGCKMTVNLIPFNDIGQHLYRKPSEERVVAFQRRLWEH-GIFTHIRNTRGDDESAACGQLAT 387          
The following BLAST results are available for this feature:
BLAST of EWM30490.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113154|gb|EWM30490.1|0.000e+0100.00hypothetical protein Naga_100013g86 [Nannochlorops... [more]
gi|298708530|emb|CBJ49163.1|4.521e-10050.00conserved unknown protein [Ectocarpus siliculosus][more]
gi|873227013|emb|CEM19671.1|5.521e-8844.74unnamed protein product [Vitrella brassicaformis C... [more]
gi|1210522514|dbj|GAX18527.1|2.945e-8042.42hypothetical protein FisN_10Hh273 [Fistulifera sol... [more]
gi|1210515992|dbj|GAX25077.1|4.737e-7842.7823S rRNA (adenine2503-C2)-methyltransferase [Fistu... [more]
gi|551637361|ref|XP_005821499.1|2.989e-7438.16hypothetical protein GUITHDRAFT_119263 [Guillardia... [more]
gi|551640992|ref|XP_005823299.1|3.313e-7338.89hypothetical protein GUITHDRAFT_90026 [Guillardia ... [more]
gi|1084846006|gb|OGQ77636.1|7.503e-7040.50hypothetical protein A2289_06300 [Deltaproteobacte... [more]
gi|551545732|ref|XP_005760835.1|8.371e-6943.02hypothetical protein EMIHUDRAFT_217562 [Emiliania ... [more]
gi|1210522526|dbj|GAX18539.1|1.155e-6737.68hypothetical protein FisN_10Hu260 [Fistulifera sol... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna137rna137Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications