rna1367, rna1367 (mRNA) Nannochloropsis gaditana

Overview
Namerna1367
Unique Namerna1367
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1141
Alignment locationCM002457.1:453520..455126 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100152g6.719.mrna
Orig protein idgnl|cribi|Naga_100152g6.719
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:453520..455126 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100152g6gene1321Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1367rna1367-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29301.1cds1365Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1367 ID=rna1367|Name=rna1367|organism=Nannochloropsis gaditana|type=mRNA|length=1141bp
GACGACAGCAAGGCCTTCGCGTGTGTGTCTTTCACGAATGCCCCTTTTAT
CCACTCGACCTCGCAGGGACTCTAACAGTTGGCCACCAGGACCACTAGGG
TTCATTATGCAGAAAAGAATGGTGAACGCATCCTCACGCTTGAGGCACCG
GGCCTTCGTCTTCCTTCGCATTTTCCTAATGATGTTGCTCCTGTCCCGAA
ATGCATGCAAGGCCGAATTCTACGTAGTGATACAACCGTCTGGGAACGAG
CAATGTTTCATGATTGAGCAACCACAAGGTACACCGGTCACAGTGGATTA
CGATCTCCCCGCATATGCGACCCAGAGCCTCAACTTAGTGATCAGCTTGG
TGTCGGGGCCTGGCGGGAAGGGAGGCGGCGGGAAAATGGTCCAACAAGTG
CAAATGAACGAGGAAAAGGGCCAGTTCAAGTTTGCCACAGTGAAAGATGG
GTTCCACTCCCTCTGTATCGTACCTCACACTGTGACCAAGCCCACGAAAG
TGGGTCTAGAGGTCACGTACGGAAAGTCCGACGCGTACTATGCTGACCTG
GCGAAAGAAGCGCACATCGACCTGTTGGAGGCCTCCATCATGCATTTGAA
CGCGCAAATGGGTCAGATTCTAAACGAAGCGGACTACATGAAAGACAAGG
AAGTCCTCTTCCACCAGCAATGCGAGCGGACGAACTCAGCGGCGCGATGG
TGGCCTATTTTGCAAGTGGGCATCCTCCTGGTCACGGGCGTGCTCCAGGT
CAACAACCTCAAACAGTTTTTCAAGGCGAGGAGATTGGTGTAGACCGACT
CACGGCCTTGCAGTGCTCGAAACAGATCCAAGGAGGATGCAGATAGGGGC
GCTGTCGGGGGCGGGGGCGAGGGCGGGGGGGATGTAGGGCTTTCATGATC
GAGTTTGGGTAACGGGCGAGGTTCGCCGGATGCGTGTACAGTACGGAACG
GAATATATGCGACGCCAATGACATTTCGTCCTCCTCCTTTTGGGATGCTT
TGAAGAGAGTAAGGGGGGAGGAAGCGAGAGACAAAGGAGGGTTAGGGTTA
CGACAACGCCTGCCGCCAAAATTGAAATGTTTTTTACTTTCATAGTTTGG
GTCTTTCCACTGGAATGATCTTTACTGTCGAATGCGTGTCT
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protein sequence of rna1367

>rna1367-protein ID=rna1367-protein|Name=rna1367|organism=Nannochloropsis gaditana|type=polypeptide|length=403bp
MPPTCGSGLVGIPLRIAWPPPHTLPMSAYICVPARPVSSCMVPAFSHPAY
SSRGRGHITSAPQVRNIAQERHRSRGLASCSLTVLRDRTLRRLLPSQFTG
DQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTV
FLFYWILAPGLAAYRRNVSFRGTYFARTPRDDGVFGALFSGRVVRVGRIR
QAREYNRPEALVMSMEDESGRKLRVYAPILPSYKKVRPGMRCEGLVLSES
PDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLASRARRRGGMGEEM
EGNEGFWEEEGVGGEEYVRPDMGFREGEEEEGDSQIFDSDGGGEGGDGDV
FARVWEEAMRNGRRRQTEEEEGAFLSEEDRARVVRRGRRTRRGGGGQEES
EDL
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mRNA from alignment at CM002457.1:453520..455126-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1367 ID=rna1367|Name=rna1367|organism=Nannochloropsis gaditana|type=mRNA|length=1607bp|location=Sequence derived from alignment at CM002457.1:453520..455126- (Nannochloropsis gaditana)
CATAACACTCGATACCACACAACAGGAGAAACTGACGAGTGTCGCAGGCA
GGAGATACTCGCGGGACTGGTTAGAGCTGTCATCGTCGTCACCGTTGCCC
TCATACGATGCCGCCAACCTGCGGCAGCGGTCTCGTAGTAAGTGGGCAAA
TTTCTTGCTCATGTCCTCTTTTTCCGTTTCATCCAAGCGTCAAAATTCGT
GCATTGAAAATAATTAGCTGTTGCTTGTTGTCCCGGCTCCCCCTCGTCAT
GACTTTTCTATAAAATATACTATTATAATCTCCTACCCCCCCTTCACCTT
CGCTCATTGCCGTCGCTCTGCCCCGCTTGTCGCCCTTCGCACAGGGCATT
CCACTCCGCATTGCATGGCCGCCTCCCCATACCCTTCCAATGTCCGCTTA
CATCTGTGTACCCGCTCGTCCCGTTTCGTCTTGCATGGTGCCGGCCTTCA
GCCATCCCGCCTATTCCTCAAGGGGCAGGGGCCATATTACTTCAGCTCCC
CAGGTCCGAAATATTGCCCAAGAACGCCACCGTTCCCGCGGTCTTGCCTC
CTGTAGCCTTACAGTTCTTCGCGATCGGACGCTGCGTCGGCTTCTTCCCT
CGCAATTCACGGGGGACCAGTGGAAATACTACTGGGGCATCACGGAGAGC
GACAAGTTCGGCAAGATCTACGAAGCTGCCTCTGCGACGTTCTTCGGGCT
TTGGACGAGCTGGTTTCTGACATTCTTGATCGGTCTGCCCGCAGCCACAG
TCCTGGGCACGGTGTTCTTGTTTTACTGGATTTTGGCCCCGGGCTTGGCT
GCCTACCGGCGGAACGTGAGCTTCCGCGGCACTTACTTCGCCCGGACCCC
GCGCGACGACGGCGTCTTCGGCGCGCTCTTTAGTGGGAGGGTCGTGCGCG
TGGGCCGCATCCGGCAGGCGAGGGAGTACAACCGGCCCGAGGCCCTGGTC
ATGTCCATGGAGGACGAATCGGGGCGGAAGCTGCGAGTCTACGCGCCAAT
CTTACCCAGCTACAAAAAAGTGCGGCCAGGGATGCGGTGCGAGGGGTTGG
TCTTGAGCGAGTCGCCCGACTTCGATGAGCTGATGGGGGTCTCGGACGTC
TTTGTACCAGACTGCGGGGCCTGGGTGGGCGAGTACCCGTACATCGACAA
GGTGCCGTTTAAAGCCTTCTTGGCGAGCAGGGCGAGGCGAAGGGGCGGGA
TGGGGGAGGAGATGGAAGGAAATGAAGGGTTTTGGGAAGAGGAAGGGGTC
GGAGGGGAGGAATATGTGAGACCAGACATGGGTTTCAGGGAGGGTGAGGA
GGAGGAAGGTGATAGCCAGATTTTTGACAGCGACGGGGGAGGCGAGGGGG
GCGACGGGGATGTGTTCGCACGCGTGTGGGAAGAGGCGATGCGAAATGGA
AGGAGGAGACAGACAGAGGAGGAAGAGGGAGCGTTTCTGAGTGAGGAAGA
CCGTGCCAGGGTTGTCCGGAGGGGGAGGAGGACAAGGAGAGGCGGGGGGG
GACAGGAAGAAAGCGAGGACTTGTGAAACGAGACACGCATTCGACAGTAA
AGATCATTCCAGTGGAAAGACCCAAACTATGAAAGTAAAAAACATTTCAA
TTTTGGC
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Coding sequence (CDS) from alignment at CM002457.1:453520..455126-

>rna1367 ID=rna1367|Name=rna1367|organism=Nannochloropsis gaditana|type=CDS|length=2424bp|location=Sequence derived from alignment at CM002457.1:453520..455126- (Nannochloropsis gaditana)
GGCATTCCACTCCGCATTGCATGGCCGCCTCCCCATACCCTTCCAATGTC
CGCTTACATCTGTGTACCCGCTCGTCCCGTTTCGTCTTGCATGGTGCCGG
CCTTCAGCCATCCCGCCTATTCCTCAAGGGGCAGGGGCCATATTACTTCA
GCTCCCCAGGTCCGAAATATTGCCCAAGAACGCCACCGTTCCCGCGGTCT
TGCCTCCTGTAGCCTTACAGTTCTTCGCGATCGGACGCTGCGTCGGCTTC
TTCCCTCGCAATTCACGGGGGACCAGTGGAAATACTACTGGGGCATCACG
GAGAGCGACAAGTTCGGCAAGATCTACGAAGCTGCCTCTGCGACGTTCTT
CGGGCTTTGGACGAGCTGGTTTCTGACATTCTTGATCGGTCTGCCCGCAG
CCACAGTCCTGGGCACGGTGTTCTTGTTTTACTGGATTTTGGCCCCGGGC
TTGGCTGCCTACCGGCGGAACGTGAGCTTCCGCGGCACTTACTTCGCCCG
GACCCCGCGCGACGACGGCGTCTTCGGCGCGCTCTTTAGTGGGAGGGTCG
TGCGCGTGGGCCGCATCCGGCAGGCGAGGGAGTACAACCGGCCCGAGGCC
CTGGTCATGTCCATGGAGGACGAATCGGGGCGGAAGCTGCGAGTCTACGC
GCCAATCTTACCCAGCTACAAAAAAGTGCGGCCAGGGATGCGGTGCGAGG
GGTTGGTCTTGAGCGAGTCGCCCGACTTCGATGAGCTGATGGGGGTCTCG
GACGTCTTTGTACCAGACTGCGGGGCCTGGGTGGGCGAGTACCCGTACAT
CGACAAGGTGCCGTTTAAAGCCTTCTTGGCGAGCAGGGCGAGGCGAAGGG
GCGGGATGGGGGAGGAGATGGAAGGAAATGAAGGGTTTTGGGAAGAGGAA
GGGGTCGGAGGGGAGGAATATGTGAGACCAGACATGGGTTTCAGGGAGGG
TGAGGAGGAGGAAGGTGATAGCCAGATTTTTGACAGCGACGGGGGAGGCG
AGGGGGGCGACGGGGATGTGTTCGCACGCGTGTGGGAAGAGGCGATGCGA
AATGGAAGGAGGAGACAGACAGAGGAGGAAGAGGGAGCGTTTCTGAGTGA
GGAAGACCGTGCCAGGGTTGTCCGGAGGGGGAGGAGGACAAGGAGAGGCG
GGGGGGGACAGGAAGAAAGCGAGGACTTGTGAATGCCGCCAACCTGCGGC
AGCGGTCTCGTAGGCATTCCACTCCGCATTGCATGGCCGCCTCCCCATAC
CCTTCCAATGTCCGCTTACATCTGTGTACCCGCTCGTCCCGTTTCGTCTT
GCATGGTGCCGGCCTTCAGCCATCCCGCCTATTCCTCAAGGGGCAGGGGC
CATATTACTTCAGCTCCCCAGGTCCGAAATATTGCCCAAGAACGCCACCG
TTCCCGCGGTCTTGCCTCCTGTAGCCTTACAGTTCTTCGCGATCGGACGC
TGCGTCGGCTTCTTCCCTCGCAATTCACGGGGGACCAGTGGAAATACTAC
TGGGGCATCACGGAGAGCGACAAGTTCGGCAAGATCTACGAAGCTGCCTC
TGCGACGTTCTTCGGGCTTTGGACGAGCTGGTTTCTGACATTCTTGATCG
GTCTGCCCGCAGCCACAGTCCTGGGCACGGTGTTCTTGTTTTACTGGATT
TTGGCCCCGGGCTTGGCTGCCTACCGGCGGAACGTGAGCTTCCGCGGCAC
TTACTTCGCCCGGACCCCGCGCGACGACGGCGTCTTCGGCGCGCTCTTTA
GTGGGAGGGTCGTGCGCGTGGGCCGCATCCGGCAGGCGAGGGAGTACAAC
CGGCCCGAGGCCCTGGTCATGTCCATGGAGGACGAATCGGGGCGGAAGCT
GCGAGTCTACGCGCCAATCTTACCCAGCTACAAAAAAGTGCGGCCAGGGA
TGCGGTGCGAGGGGTTGGTCTTGAGCGAGTCGCCCGACTTCGATGAGCTG
ATGGGGGTCTCGGACGTCTTTGTACCAGACTGCGGGGCCTGGGTGGGCGA
GTACCCGTACATCGACAAGGTGCCGTTTAAAGCCTTCTTGGCGAGCAGGG
CGAGGCGAAGGGGCGGGATGGGGGAGGAGATGGAAGGAAATGAAGGGTTT
TGGGAAGAGGAAGGGGTCGGAGGGGAGGAATATGTGAGACCAGACATGGG
TTTCAGGGAGGGTGAGGAGGAGGAAGGTGATAGCCAGATTTTTGACAGCG
ACGGGGGAGGCGAGGGGGGCGACGGGGATGTGTTCGCACGCGTGTGGGAA
GAGGCGATGCGAAATGGAAGGAGGAGACAGACAGAGGAGGAAGAGGGAGC
GTTTCTGAGTGAGGAAGACCGTGCCAGGGTTGTCCGGAGGGGGAGGAGGA
CAAGGAGAGGCGGGGGGGGACAGGAAGAAAGCGAGGACTTGTGAATGCCG
CCAACCTGCGGCAGCGGTCTCGTA
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Synonyms
Publications