EWM29301.1, cds1365 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29301.1 vs. NCBI_GenBank
Match: gi|585111825|gb|EWM29301.1| (hypothetical protein Naga_100152g6 [Nannochloropsis gaditana]) HSP 1 Score: 813.527 bits (2100), Expect = 0.000e+0 Identity = 403/403 (100.00%), Postives = 403/403 (100.00%), Query Frame = 0
Query: 1 MPPTCGSGLVGIPLRIAWPPPHTLPMSAYICVPARPVSSCMVPAFSHPAYSSRGRGHITSAPQVRNIAQERHRSRGLASCSLTVLRDRTLRRLLPSQFTGDQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTVFLFYWILAPGLAAYRRNVSFRGTYFARTPRDDGVFGALFSGRVVRVGRIRQAREYNRPEALVMSMEDESGRKLRVYAPILPSYKKVRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLASRARRRGGMGEEMEGNEGFWEEEGVGGEEYVRPDMGFREGEEEEGDSQIFDSDGGGEGGDGDVFARVWEEAMRNGRRRQTEEEEGAFLSEEDRARVVRRGRRTRRGGGGQEESEDL 403
MPPTCGSGLVGIPLRIAWPPPHTLPMSAYICVPARPVSSCMVPAFSHPAYSSRGRGHITSAPQVRNIAQERHRSRGLASCSLTVLRDRTLRRLLPSQFTGDQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTVFLFYWILAPGLAAYRRNVSFRGTYFARTPRDDGVFGALFSGRVVRVGRIRQAREYNRPEALVMSMEDESGRKLRVYAPILPSYKKVRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLASRARRRGGMGEEMEGNEGFWEEEGVGGEEYVRPDMGFREGEEEEGDSQIFDSDGGGEGGDGDVFARVWEEAMRNGRRRQTEEEEGAFLSEEDRARVVRRGRRTRRGGGGQEESEDL
Sbjct: 1 MPPTCGSGLVGIPLRIAWPPPHTLPMSAYICVPARPVSSCMVPAFSHPAYSSRGRGHITSAPQVRNIAQERHRSRGLASCSLTVLRDRTLRRLLPSQFTGDQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTVFLFYWILAPGLAAYRRNVSFRGTYFARTPRDDGVFGALFSGRVVRVGRIRQAREYNRPEALVMSMEDESGRKLRVYAPILPSYKKVRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLASRARRRGGMGEEMEGNEGFWEEEGVGGEEYVRPDMGFREGEEEEGDSQIFDSDGGGEGGDGDVFARVWEEAMRNGRRRQTEEEEGAFLSEEDRARVVRRGRRTRRGGGGQEESEDL 403
BLAST of EWM29301.1 vs. NCBI_GenBank
Match: gi|553188606|ref|XP_005854826.1| (putative membrane protein [Nannochloropsis gaditana CCMP526] >gi|422294238|gb|EKU21538.1| putative membrane protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 801.201 bits (2068), Expect = 0.000e+0 Identity = 397/403 (98.51%), Postives = 399/403 (99.01%), Query Frame = 0
Query: 1 MPPTCGSGLVGIPLRIAWPPPHTLPMSAYICVPARPVSSCMVPAFSHPAYSSRGRGHITSAPQVRNIAQERHRSRGLASCSLTVLRDRTLRRLLPSQFTGDQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTVFLFYWILAPGLAAYRRNVSFRGTYFARTPRDDGVFGALFSGRVVRVGRIRQAREYNRPEALVMSMEDESGRKLRVYAPILPSYKKVRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLASRARRRGGMGEEMEGNEGFWEEEGVGGEEYVRPDMGFREGEEEEGDSQIFDSDGGGEGGDGDVFARVWEEAMRNGRRRQTEEEEGAFLSEEDRARVVRRGRRTRRGGGGQEESEDL 403
MPPTCGSGLVGIPLRIAWPP HTLPMSAYICVPARPVSSCMVPAFSHPAYSSRGRGHITSAPQVRNIAQERHRSRGLASCSLTVLRDRTLRRLLPSQFTGDQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTVFLFYWILAPGLAAYRRNVSFRGTYFARTPRDDGVFGALFSGRVVRVGRIRQAREYNRPEALVMSMEDESGRKLRVYAPILPSYKKVRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLASRARRRGGMGEEMEGNEGFWEEEGVGGEEYVRPDMGFREGEEEEGDSQIFDSDGGGEGGDGDVFARVWEEAMRNGRRRQTEEEE A LSEEDRARVVR GRRTRRGGGG+EESED+
Sbjct: 1 MPPTCGSGLVGIPLRIAWPPLHTLPMSAYICVPARPVSSCMVPAFSHPAYSSRGRGHITSAPQVRNIAQERHRSRGLASCSLTVLRDRTLRRLLPSQFTGDQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTVFLFYWILAPGLAAYRRNVSFRGTYFARTPRDDGVFGALFSGRVVRVGRIRQAREYNRPEALVMSMEDESGRKLRVYAPILPSYKKVRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLASRARRRGGMGEEMEGNEGFWEEEGVGGEEYVRPDMGFREGEEEEGDSQIFDSDGGGEGGDGDVFARVWEEAMRNGRRRQTEEEEEALLSEEDRARVVRTGRRTRRGGGGEEESEDM 403
BLAST of EWM29301.1 vs. NCBI_GenBank
Match: gi|553188389|ref|XP_005854789.1| (putative membrane protein [Nannochloropsis gaditana CCMP526] >gi|422294278|gb|EKU21578.1| putative membrane protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0 Identity = 317/319 (99.37%), Postives = 317/319 (99.37%), Query Frame = 0
Query: 64 VRNIAQERHRSRGLASCSLTVLRDRTLRRLLPSQFTGDQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTVFLFYWILAPGLAAYRRNVSFRGTYFARTPRDDGVFGALFSGRVVRVGRIRQAREYNRPEALVMSMEDESGRKLRVYAPILPSYKKVRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLASRARRRGGMGEEMEGNEGFWEEEGVGGEEYVRPDMGFREGEEEEGDSQIFDSDGGGEGGDGDVFARVWEEAMRNGRRRQTEEEEGAFLSEEDRAR 382
VRNIAQERHRSRGLASCSLTVLRDRTLRRLLPSQFTGDQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTVFLFYWILAPGLAAYRRNVSFRGTYFARTPRDDGVFGALFSGRVVRVGRIRQAREYNRPEALVMSMEDESGRKLRVYAPILPSYKKVRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLASRARRRGGMGEEMEGNEGFWEEEGVGGEEYVRPDMGFREGEEEEGDSQIFDSDGGGEGGDGDVFARVWEEAMRNGRRRQTEEEE A LSEEDRAR
Sbjct: 11 VRNIAQERHRSRGLASCSLTVLRDRTLRRLLPSQFTGDQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTVFLFYWILAPGLAAYRRNVSFRGTYFARTPRDDGVFGALFSGRVVRVGRIRQAREYNRPEALVMSMEDESGRKLRVYAPILPSYKKVRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLASRARRRGGMGEEMEGNEGFWEEEGVGGEEYVRPDMGFREGEEEEGDSQIFDSDGGGEGGDGDVFARVWEEAMRNGRRRQTEEEEEALLSEEDRAR 329
BLAST of EWM29301.1 vs. NCBI_GenBank
Match: gi|299117513|emb|CBN75357.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 151.369 bits (381), Expect = 5.785e-38 Identity = 78/186 (41.94%), Postives = 110/186 (59.14%), Query Frame = 0
Query: 108 GITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTVFLFYWILAPGLAAYRRNVSFRGTYFARTPRDDGVFGALFSGRVVRVGRIRQAREYN----RPEALVMSMEDESGRKLRVYAPILPSYKKVRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLASR 289
G+ S + GK++E A+ F GLW +F +F +G+ TV+GT FLFYW+LAP + ++RRN + +G+ A P G A+FS RV EY+ +P L M +EDE GR L+ Y +VRPGM E +++S F+E++GVSD F+P WVGEYPY+DKV + LASR
Sbjct: 21 GVPTSQRVGKLFEVAAVAFLGLWACYFASFFLGVATMTVIGTSFLFYWLLAPNVTSFRRNRALKGS-IAPFPGARGNSVAIFSARVASA-----VEEYHPVTGQPVFLRMVIEDEDGRALKFRTRTRAEYARVRPGMAAEAILVSPDERFEEILGVSDTFIPAANVWVGEYPYLDKVVMRRLLASR 200
BLAST of EWM29301.1 vs. NCBI_GenBank
Match: gi|219128461|ref|XP_002184431.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404232|gb|EEC44180.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 135.961 bits (341), Expect = 4.478e-33 Identity = 79/233 (33.91%), Postives = 122/233 (52.36%), Query Frame = 0
Query: 99 TGDQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTVFLFYWILAPGLAAYRRNVSFRG----------TYFARTPRDDGVFGALFSGRVVRVGRIRQAREYN-----------------------RPEALVMSMEDES-----------GRKLRVYAPILPSYKKVRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLA 287
T Q+ YWG T +++G++ E+A +F G+ S+F++F++G AT+ G++FLF+ IL+P L AY+RN F G R P D G++GALF G + V + A Y+ RP L + + D+S GR+L+V+A + Y VR GM G++LS SP FD L ++D+FVPD G W+G+YPY+++ + LA
Sbjct: 21 TAIQYSTYWGRTAQEQYGRVLESAIVSFLGVSFSYFMSFVVGGFVATIFGSLFLFWGILSPELKAYQRNWEFLGGRELVDPWGVRESGRDPEDAGLYGALFLGYIADVCVVEDATTYSYEYDLAEFADYNMNDDELEKYTGRPYLLRLLVADKSVNGQDRDDIGGGRELQVHARLSDEYLDVRRGMPVSGILLSTSPRFDRLAAITDLFVPDAGCWIGDYPYLNRAEVEDLLA 253
BLAST of EWM29301.1 vs. NCBI_GenBank
Match: gi|1210529638|dbj|GAX11732.1| (hypothetical protein FisN_7Lh111 [Fistulifera solaris]) HSP 1 Score: 115.931 bits (289), Expect = 8.393e-26 Identity = 75/243 (30.86%), Postives = 122/243 (50.21%), Query Frame = 0
Query: 78 ASCSLTVLRDRTLRRLLPSQFTGDQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTVFLFYWILAPGLAAYRRNVSFRG---------TYFARTPRDDGVFGALFSGRVVRVGRIRQA-----------REYN-----------RPEALVMSMEDESGRKLRVYAPILPSYKK--VRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLA 287
A +LTV + L P TG Q+ Y G T ++FG++ E++ F G++ S+FL+F+IG AT+LG +F F+ IL+P AY+RN F G T + P G++ ALF G + + + A R+Y RP L + D +GR+L+++ + Y + G+ ++LS +F L G++D++VPD W+G+YPY+D+ +A LA
Sbjct: 23 ALIALTVAETQNLLSTGPP--TGAQYSVYIGRTPRERFGRLIESSIVGFLGVFFSYFLSFVIGGFFATLLGCIFFFWGILSPEFQAYQRNWEFLGGRPLVDMEDTAAKKDPDKTGLYSALFVGHLADLAVVEDAISDVEYDLDDFRDYTMDGDELEKLTGRPYLLRVLARDRTGRELQIHTRMSEEYVDGALETGLPVTAILLSTKRNFSRLAGITDLYVPDVNLWLGDYPYLDREHMEAMLA 263
BLAST of EWM29301.1 vs. NCBI_GenBank
Match: gi|1210520367|dbj|GAX20798.1| (hypothetical protein FisN_7Hh111 [Fistulifera solaris]) HSP 1 Score: 116.316 bits (290), Expect = 1.377e-25 Identity = 83/292 (28.42%), Postives = 140/292 (47.95%), Query Frame = 0
Query: 30 ICVPARPVSSCMVPAFSHPAYSSRGRGHITSAPQVRNIAQERHRSRGLASCSLTVLRDRTLRRLLPS-QFTGDQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTVFLFYWILAPGLAAYRRNVSFRG---------TYFARTPRDDGVFGALFSGRVVRVGRIRQA-----------REYN-----------RPEALVMSMEDESGRKLRVYAPILPSYKK--VRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLA 287
+ +P P+ ++ PA S R + +P + + R R L +L L + LL + TG Q+ Y G T ++FG++ E++ F G++ S+FL+F+IG AT+LG +F F+ IL+P AY+RN F G T + P G++ ALF G + + + A R+Y RP L + D +GR+L+++ + Y + G+ ++LS +F L G++D++VPD W+G+YPY+D+ +A LA
Sbjct: 14 LLIPCPPIWGFVITRNGLPAKSLRKM--VCQSPNL--VFPHRRRKDLLKRNALIPLTVPETQNLLSTGPPTGAQYSVYIGRTPRERFGRLIESSIVGFLGVFFSYFLSFVIGGFFATLLGCIFFFWGILSPEFQAYQRNWEFLGGRPLVDMEDTTAKKDPDKAGLYSALFVGHLADLAVVEDAISDVEYDLDDFRDYTMDGDELEKLTGRPYLLRVLARDRTGRELQIHTRMSEEYVDGALETGLPVTAILLSTQRNFSRLAGITDLYVPDANLWLGDYPYLDREHMEAMLA 301
BLAST of EWM29301.1 vs. NCBI_GenBank
Match: gi|1072234090|gb|OEU18820.1| (hypothetical protein FRACYDRAFT_182869 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 103.99 bits (258), Expect = 6.219e-22 Identity = 62/222 (27.93%), Postives = 114/222 (51.35%), Query Frame = 0
Query: 99 TGDQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTVFLFYWILAPGLAAYRRNVSFRG---------TYFARTPRDD-GVFGALFSGRVVRVGRIRQ---AREYNR-------------------PEALVMSMEDESGRKLRVYAPILPSYKKVRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLAS 288
+G Q+ YWG T+ + + ++ E++ F G++ S+FL+F++G ATV+G++F F+ IL+P A +RN G R RD+ G++G++ GR+ V + EYN P + + + D+ R+L++++ + Y + GM G++LS S F+ L +SD++VPD +VG+YPY+++ ++ S
Sbjct: 21 SGLQYATYWGQTKRETYNRLLESSIIGFIGIFFSYFLSFVVGSFLATVVGSLFAFWAILSPDFKARQRNWELLGGRQLVDPWINDNRREERDNAGLYGSILLGRIDDVCVVEDNSSIEEYNLNEFQDYKNDRDVLEEITGIPYLIRIKINDDENRELQIHSRLKEEYLNIEIGMPIAGILLSTSDTFESLSAMSDIYVPDAECFVGDYPYLNRPGIESLFES 242
BLAST of EWM29301.1 vs. NCBI_GenBank
Match: gi|1057523322|ref|WP_068820194.1| (phosphate ABC transporter permease [Phormidesmis priestleyi]) HSP 1 Score: 95.5153 bits (236), Expect = 9.102e-19 Identity = 70/229 (30.57%), Postives = 105/229 (45.85%), Query Frame = 0
Query: 82 LTVLRDRTLRRLLPSQFTGDQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLIGLPAATVLGTVFLFYWILAPGLAAYRRNVSFRGTYFARTPRDDGVFGALFSGRVVRVGRIRQAR-----EYNRPEALVMSMEDESGRKLRVYAPILPSYKKVRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDKVPFKAFLASRARRRGGMGEEMEGNEG 305
L L + L +L+P+ TG Q+ Y WG SD ++ + SA L SW L LG L YW+ P L A +N+ +R +A R + V S VV R NR L + ++DESG + P+ Y+ + PG E +VLS PD + V+D+F+P CG WV +YPY+ + F++ SR GG ++ + +E
Sbjct: 2 LIPLSRKKLEQLIPAVGTGAQYAYCWG-KFSDLLLRVLISISALAVILLVSWILPIEALRGLRFFLGLFALVYWLWRPVLQAGLKNIEYRRYKYAGFLRGE-VTDIYLSDEVVGTQETVNDRGELVVVENRERKLNLVVDDESGFMTELQVPLKRDYQAIAPGDTAEMVVLSNRPDLSRIAKVTDIFIPRCGVWVSDYPYLRRDEFES--VSRRLDAGGEVDDRDYDES 226
BLAST of EWM29301.1 vs. NCBI_GenBank
Match: gi|299117141|emb|CBN75105.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 94.3597 bits (233), Expect = 3.161e-18 Identity = 79/273 (28.94%), Postives = 129/273 (47.25%), Query Frame = 0
Query: 17 AWPPPHTLPMSAYICVPARP--VSSCMVPAFSHPAYSSRGRGHITSAPQVRNIAQERHRSRGLASCSLTVLRDRTLRRLLPSQFTGDQWKYYWGITESDKFGKIYEAASATFFGLWTSWFLTFLI------GLPAATVLGTVFLFYW--ILAPGLAAYRRNVSFRGTYFARTPRDDGVFGALFSGRVVRVGRIRQAREYNRPEALVMSMEDESGRKLRVYAPILPSYKKVRPGMRCEGLVLSESPDFDELMGVSDVFVPDCGAWVGEYPYIDK 279
AW P LP+S + P + V++ + P+ +A R+ R R R + +C L L RTL+R++P + T +++ ++G T D+ K+ F W ++F T + G+ A G+ + L P + +Y R + G R GALF+GRV + G ++ N M +EDESGR+L P +P Y+++R GM C +VLS S F EL GV++ ++P+ +VG +P +DK
Sbjct: 22 AWTAP--LPLSGGLIAPGQQSFVATPVTPS--------------VTATTTRSSHDWRDRRRQVPTCKLDRLPVRTLKRVVPLRPTPEKYLAHFGQTPLDRRRKMVNVLGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRPVVGSYNRALELWGAGSREARRKTK--GALFTGRVTKTGFALSSQASNHRAHFQMLVEDESGRELLFDVPQVPEYRRIRKGMHCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDK 276 The following BLAST results are available for this feature:
BLAST of EWM29301.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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