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Properties
| Property Name | Value |
|---|
| Product | emp24 gp25l p24 family protein |
| Orig transcript id | gnl|cribi|Naga_100152g5.721.mrna |
| Orig protein id | gnl|cribi|Naga_100152g5.721 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:452334..453596 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1366 ID=rna1366|Name=rna1366|organism=Nannochloropsis gaditana|type=mRNA|length=5209bp
CCGATTGGGAGGATGCAATCAAACCGGGGGTCGAACTGGAATTCGGAAAA
GAGGAGGCGGACGGGGCGGGTATTGTGAGCGACTTGTTCGGACTTGCCCG
CTACGATCCGGGAGACGAGTTGTTGGCTCGGAGAGGTTTAACTCCTGAGC
AGGTACCCCCCTTGGCCCATTCGGAGATATTCTGGCGCGTTGCTTTGCTT
TTGCTCCTTGTGAGTGGGAGCAACCCGTCATCCGTGGGGCAATGGCTGTG
GCGGCACTGTCCAACCACGCGGTGCTTGATGCAGATGGTGGTGTGCAATC
AGTATCACTTCCCCCCCCCGGGCGCCGTCCTGACCGCAGACGGGGGCGAC
AAAGGATCAAGGAGGAATGGAATCAAGAAACGGACGTCCGTTGGGTCCCT
GAGCGGGGCTTTTGGTGGGGGCTCTGGAGATGTGCGAGGAGCTGAAGGGC
AGATAATGGCTGCAGATACGGAACTCGCGGAAGAGGAAGCAGTCTTGAGC
AAAGTGCTCCGGGGTGAGCGGCGCACGGGCAAGAAACGAAAACGTCTAAA
TGTTAACCGTGCCGGGGAAGGTGACGTGCCTGACAACAAACCTCTTCTCT
CCCTCATTTTCCTTGATTTGAGCATGCCTCCCCGAACGCCTCCAGCCGAC
GTGATCGAGCGGCTGAAAGCCTTGAACGCAGAGTTTGGAATCGGGGCACG
CTTACGCCGGGCGACGGAACCAGACTTTGTGGCGGCAGCCATTGCGGGCG
ATGGCTCCCGCGGCGTATCGCGTCGGATGCTTATGACGACAATGGAGTGG
TTGGCACCTGCAGTCGCAGCCGAACCACAGGTGACACTGAGGCGTTTGCC
TCTGGAATGCATATGTCATATGTACATGATTGCGCATATGAAGACGTCTC
AAAAAGGGCACGCACAACCGCGGCAGCATCCATTGGGTCAGTCGGGAAAT
GAGCGGGGCGAGAGAACGCCTGCAAGTGCGGTACGAGGCGCCTTGCAGAC
ACTCTTGGGCCCGATGCGGCGAATCATCTTGGACCGACTCTTTGAGGAAT
GCGAGCCGACGGTTGCCGGTGCGGGTGAGAGAAGCAGCGCGGTCTTGAGC
TCTGAGGTGGAGGAGAGAGCCTCGAAGGCCCTTTCTGTCTTTACGGATGA
GCTGCGCGCCGTGGAAACTCTGCGGCGAGCGGCCGCCCGCCGGGCCCTGG
ACGAATTGCTCGTTCACAGCCCCGAGAGGAGTAAGAGAGTGGCGGAAGCT
GGCATGGTGGACGCCCAGGGTGATGCCTGGGTCGGCACAGACCTGGCCGT
CCGAATGGGGGAGCCGGGTTTTGTGGCGAGGGCCTCCCAAGTGCACTGCG
CGTGGATGTTTCACTTGCAAGATTTACCCTGCTTTCGGAGCAAACCGGCA
GCTACGTTGCGTGCATTGTACGAGGCATTGCAGGTGGAAGCCTCACATCA
CGTTATCAGCTACTATCTCTTGGGGCTACTCTTCCACTGCCACGGACCTG
CGGCCGCCTCAGGGGACCGATTCAGGATCCGGCGGTCAAAAACCAAGGGG
CGAGGTTACAAACTCAGTGGATCGTTTCGCAGCCCTTCTTTCTTCAGCTT
TGTCGCGTCGACAGTGCTCATATCTCGAAAATTGGTGGTTCAAGCCGCAA
TGGAGCACACGCCCTTCCTGCGCCGTGTCTTGGTAGAGGAGGTGACGGCG
ACACTGGCAGAGAGTTCGTGTGCTCAGGGAGATTCTCTCGCGACTCCCGG
CGAAAAGTGCACAACACATGACGAGGAAACGACCACTCAATCCAAACACG
CCAAGCGCGTGTGGCAAAGCTGCGACCTTGCGCGGCTTTGCCTTTCCTGC
GATGATCTTTCTGGACCCCGCAATGTCCTCCTTCCCGACACTCTCCTCGC
TGCATGCTTCTCCCTCATGAGCATGCACAAGGGAAGCTCGATACCCCCGG
TCTTGGAGCAATTACTGGGTCTACTCTTCCCCTCTGCGGTGAACGCACCA
GATGGCCGTCTGTTGGGAGCTTCTGGCGCCTCAAAGGTCTCGGACGCGGC
TGCTGACGTCGATGGGATGGAGAGGGACGAAGGGGAAAGGGCAGCCTTGG
GCCCCGAGGAATGGATAGGCCTGGTCAAATGTGAATCTCATGTCATCTCG
GCCGCTGCAGCGCGCTGCATGCCGCACGTTTTCCTTCCCACTCTTATATT
CTGCTCTGGCCTCTCTCGTGACAGCTTCTATGCTGCACTGTCCCGGATCG
AGGAATTGAGCAAGGGGGCGAAGAAGGCAGAAACCGTTTACCGCGAGCTT
CTTTGGTCCAGCTCGGAGGCGACACGACAGGGCTCACGGTCATTGAACAT
GCAGCCTTCGCTCTTGAGGAAACTAGCGCGGCATACAACTGCTTACATTC
AATTGCATGCACCAAGGAATGAGAGTGAACGAGCGACCTGCGCAGGCAAT
TTCTGCTCCTGGCTCTCCCACGAAGTGCCATCGGCAGTGTCGGCCCGAAC
CTTGGCTCGCAACGAACCGAGCGATGTGCCAAAGAGGGACGACTCACTGA
CGCGACGCCGAGGAGGGCCTTCAACGTTTCCTTCCACGAGGAACCGTACG
ACCACAAATCACATGCTGTTGGAAAGCGTTAGAGGACTGACTCTCGATAT
GGAACAGGAAGAAGCACTACCTGAGGCAGCACCAAGCAAGGAAAGGGGAG
ATAGTGGAATTTTGACTTATTCAAGTTCCGGAATAGAAACACCATGCAAG
TTTCCGGTAGTTCCAGCAGATGCTGAGCAAAGTATTGTCGACTTTATGCT
GCCCTTCAAGATGAGAAAAGAGGAGAAGGACTCCCGTGATGGGGAAGGAA
GATCCTCGCTCAATAAATTAATTAATCGCGCTCTCTCGGCCGCGACGGAG
GCGTCAAGAGCCGAGTTACTCCACGTGTTGTCTCAAGTGGCCTGCTCACT
CGGTTCCGAGTTCGTAACGGGTCCTATGGGCCGCTGGCGATGGCATTCCA
AATACGCACACGATGGGGAAGAGCAGTTGGTGGAAGTGAGCTACATCGTC
CAGCTTTTGCACCGTTGCATTCGATCGACGGCGTTCTCGGTGGGCACAGG
TCAGGAAGGGGAAGATAGCTCGATCGAGGAAGGAGGAGCACGTTTAATCG
CGAAATTGCTTTGCCAAGTCTGTTTGATGCATTGGCTGGCGGTTGACGAA
GAGGGATTGGGCGCCCGCTGTCAGGGCTTGATCTGGGATCTGCTCCTTTC
TTGCCGGTCCACGCCATACACGGGTAGTTGTAGCAATGTGCGGCACGCAC
TTTTGTCGCAGGTGCTCGAAACTTTCTCCGTGGACGAGCTGGAACCCCTG
GTCCAGCGCATTTTCAAGGATTCGGGCAAGGCAAATCTCGCGGGCGCGAG
CGGCGACGGCAGTGTAGAGAGTCCTCCTTTCGACGTGTATGTAGCCTTAT
CGTTACTGAACCGATGGTTCTGCAGACCTGGTCAAAGTCCCATGGTGACC
GAGCTTGGGCTCTCCCCGGGCACTCGTCAGGGCTTGGCTGCGGCAGCGGC
AGCACGGACCATTCCATCCACTACTTCCCCTTTGGTTTCTCTGTCAGCTC
AGGGGTTAAGTGACAAGTCTGGACACCCTTTCCTGGTAAGGGATGGGGCA
ACTCTTTCTTTATCGCCGGGGGACTTGGACACAGTGCTCAAGCTGGTCTG
TCAGGGCCTGGCCCTCCTCAACGGTCTGCAGGGAAACATGGGCGCCCAAA
GAAATCACTCGTCCAGGGACGGCCCTACGCAGCATCTGCTGCTCTTCCAC
GAATCCATCGCAGCTCTCTGCATCCATCTTTCAGATCGACATTCTACTTT
CCGGCGAGTGCTTATGCAACAGCTCCTCTCCTTGTTTAAGGACAAAACGA
CACCCTCCTCTTGTGAGGCCTACATTGTCTATCGACTGTACATGGCATTC
CCCGCGGATGCCGCCATACGTGGGCGGGGGGAGTATCGTGATACTAATTT
GATGGTGCGTGCCTTGTGCGAAGGCGCAGCTTTGCAGCGTCGACCGTGTC
GCAGTACGATGGACCAGAGCTTGCCTGACGATGTGGCCCATCTATGCCGC
CTGGGTCTGAACGCACAGCGCGACAGCGACGTTGTCTACCGGTTGCATGA
GCTCGCCCACTCTCATCCTTACTTGATCTTGCAGACGATTCCTGCCCTGA
CGGATATACTAACCGTGGATGCGAGCCCTGACACTGATCGACCCGTCGTG
CGCGCCCCTTTCTACTTTCCTCGTCCACCACCGGTGAAAGACGGCTCCGG
CCATTTTGAGCCATCCCTTCCACCCACCTCGTCAGCTTGCGGAGGAAATG
AGATATTCCTTGCAACGTTTGCTTCCAAAAATGAAGCTGCACCCGCTTCG
GCGCTCCAATGCCCCTCCGGGCCACTCTCCTCCATCGCCGTCGAGCTTTG
TCTCCCACGGCGTGTGCGCGCCACGTTTTGGGGTCTCTCCTTCCGTCCAC
AGCTGTGGCGTGCCGTTCTCGACCTTGTGATGGAAGTTCCTGCGTCGTGC
ATGGCTGCCTACGTGTCAGCATCCTCCTCCGGGGGCTTGGGGCGCCTAGA
GGAAATCATGGCCTTGTCGTCCACGTATGTAAGGCTCCTTGCCGCACAGG
AACGAGCCAGTCAGTGCCCTCCGGAAGGTGCTTCGTCGCCCCCGCAACCA
CCGGATAAGGTGAAAGGCAAACCCAAAAAACATCAGCTCCGCAAGCAGCC
GCCGGGCGAGCAAGAGCCGCCATTGGCGGCACCCCTGGCTTTCTCTGCTC
TCCACCAGCGGCCTCTCGAGACCGGTGTGTTGAACGCTGTTGAGTCAGAT
GGATGCCTTTTCTACATGGCAGAACGCCTCCTGCTTCTGCTCCGAGAGCT
GGAGAAGCACCACCCGTCCCCCGTCGTTGGCTTCCTACAAACGCCAGATC
CTACGCTGGGAAGAGAGGAGAAACCCTTTGATGTGGTGCGGCGGAGGCTC
GAGAAAATCCCACACGTGCCACCCGGCGAACAGTCGCATGAGCAGTCACG
ATCGTCCGCTCCTGGCCCGGCTGTGTCAGTGCCACAGCCACGTCGCGTCT
AAGTTTACCCTTGTTTTTATCTCCACTGTAAATTCCAAGCTTGATGGAAA
GACGTACGCACGAGTTAAGCAAATTAAACTGAAATGAACAAAATACAAGT
CGGCTCCTT back to topprotein sequence of rna1366 >rna1366-protein ID=rna1366-protein|Name=rna1366|organism=Nannochloropsis gaditana|type=polypeptide|length=251bp
MPLLSTRPRRDSNSWPPGPLGFIMQKRMVNASSRLRHRAFVFLRIFLMML
LLSRNACKAEFYVVIQPSGNEQCFMIEQPQGTPVTVDYDLPAYATQSLNL
VISLVSGPGGKGGGGKMVQQVQMNEEKGQFKFATVKDGFHSLCIVPHTVT
KPTKVGLEVTYGKSDAYYADLAKEAHIDLLEASIMHLNAQMGQILNEADY
MKDKEVLFHQQCERTNSAARWWPILQVGILLVTGVLQVNNLKQFFKARRL
V back to topmRNA from alignment at CM002457.1:452334..453596+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1366 ID=rna1366|Name=rna1366|organism=Nannochloropsis gaditana|type=mRNA|length=1263bp|location=Sequence derived from alignment at CM002457.1:452334..453596+ (Nannochloropsis gaditana)
GACGACAGCAAGGCCTTCGCGTGTGTGTCTTTCACGAATGCCCCTTTTAT
CCACTCGACCTCGCAGGGACTCTAACAGTTGGCCACCAGGACCACTAGGG
TTCATTATGCAGAAAAGAATGGTGAACGCATCCTCACGCTTGAGGCACCg
ggccttcgtcttccttcgcATTTTCCTAATGATGTTGCTCCTGTCCCGAA
ATGCATGCAAGGCCGAATTCTACGTAGTGATACAACCGGTACGTTTTTTG
CCCCGGTATTGTCTCAGAAATGTTGAAACCAAACAAACAAGCAAAACCTA
CTTGCCCGCGACTCACGCCTCACCCAAACCGCCTCCCTATGTACTATCTC
AATGTTTCAGTCTGGGAACGAGCAATGTTTCATGATTGAGCAACCACAAG
GTACACCGGTCACAGTGGATTACGATCTCCCCGCATATGCGACCCAGAGC
CTCAACTTAGTGATCAGCTTGGTGTCGGGGCctggcgggaagggaggcgg
cgggaaaATGGTCCAACAAGTGCAAAtgaacgaggaaaagggccaGTTCA
AGTTTGCCACAGTGAAAGATGGGTTCCACTCCCTCTGTATCGTACCTCAC
ACTGTGACCAAGCCCACGAAAGTGGGTCTAGAGGTCACGTACGGAAAGTC
CGACGCGTACTATGCTGACCTGGCGAAAGAAGCGCACATCGACCTGTTGG
AGGCCTCCATCATGCATTTGAACGCGCAAATGGGTCAGATTCTAAACGAA
GCGGACTACATGAAAGACAAGGAAGTCCTCTTCCACCAGCAATGCGAGCG
GACGAACTCAGCGGCGCGATGGTGGCCTATTTTGCAAGTGGGCATCCTCC
TGGTCACGGGCGTGCTCCAGGTCAACAACCTCAAACAGTTTTTCAAGGCG
AGGAGATTGGTGTAGACCGACTCACGGCCTTGCAGTGCTCGAAACAGATC
CAAGGAGGATGCAGATAGGGGCGCtgtcgggggcgggggcgagggcgggg
gggatgtaGGGCTTTCATGATCGAGTTTGGGTAACGGGCGAGGTTCGCCG
GATGCGTGTACAGTACGGAACGGAATATATGCGACGCCAATGAcatttcg
tcctcctccttttggGATGCTTTGAAGAGAgtaaggggggaggaagcgag
agacaaaggagggttagggttacgACAACGCCTGCCGCCAAAATTGAAAT
GTTTTTTACTTTCATAGTTTGGGTCTTTCCACTGGAATGATCTTTACTGT
CGAATGCGTGTCT back to topCoding sequence (CDS) from alignment at CM002457.1:452334..453596+ >rna1366 ID=rna1366|Name=rna1366|organism=Nannochloropsis gaditana|type=CDS|length=1512bp|location=Sequence derived from alignment at CM002457.1:452334..453596+ (Nannochloropsis gaditana)
ATGCCCCTTTTATCCACTCGACCTCGCAGGGACTCTAACAGTTGGCCACC
AGGACCACTAGGGTTCATTATGCAGAAAAGAATGGTGAACGCATCCTCAC
GCTTGAGGCACCgggccttcgtcttccttcgcATTTTCCTAATGATGTTG
CTCCTGTCCCGAAATGCATGCAAGGCCGAATTCTACGTAGTGATACAACC
GTCTGGGAACGAGCAATGTTTCATGATTGAGCAACCACAAGGTACACCGG
TCACAGTGGATTACGATCTCCCCGCATATGCGACCCAGAGCCTCAACTTA
GTGATCAGCTTGGTGTCGGGGCctggcgggaagggaggcggcgggaaaAT
GGTCCAACAAGTGCAAAtgaacgaggaaaagggccaGTTCAAGTTTGCCA
CAGTGAAAGATGGGTTCCACTCCCTCTGTATCGTACCTCACACTGTGACC
AAGCCCACGAAAGTGGGTCTAGAGGTCACGTACGGAAAGTCCGACGCGTA
CTATGCTGACCTGGCGAAAGAAGCGCACATCGACCTGTTGGAGGCCTCCA
TCATGCATTTGAACGCGCAAATGGGTCAGATTCTAAACGAAGCGGACTAC
ATGAAAGACAAGGAAGTCCTCTTCCACCAGCAATGCGAGCGGACGAACTC
AGCGGCGCGATGGTGGCCTATTTTGCAAGTGGGCATCCTCCTGGTCACGG
GCGTGCTCCAGGTCAACAACCTCAAACAGTTTTTCAAGGCGAGGAGATTG
GTGTAGATGCCCCTTTTATCCACTCGACCTCGCAGGGACTCTAACAGTTG
GCCACCAGGACCACTAGGGTTCATTATGCAGAAAAGAATGGTGAACGCAT
CCTCACGCTTGAGGCACCgggccttcgtcttccttcgcATTTTCCTAATG
ATGTTGCTCCTGTCCCGAAATGCATGCAAGGCCGAATTCTACGTAGTGAT
ACAACCGTCTGGGAACGAGCAATGTTTCATGATTGAGCAACCACAAGGTA
CACCGGTCACAGTGGATTACGATCTCCCCGCATATGCGACCCAGAGCCTC
AACTTAGTGATCAGCTTGGTGTCGGGGCctggcgggaagggaggcggcgg
gaaaATGGTCCAACAAGTGCAAAtgaacgaggaaaagggccaGTTCAAGT
TTGCCACAGTGAAAGATGGGTTCCACTCCCTCTGTATCGTACCTCACACT
GTGACCAAGCCCACGAAAGTGGGTCTAGAGGTCACGTACGGAAAGTCCGA
CGCGTACTATGCTGACCTGGCGAAAGAAGCGCACATCGACCTGTTGGAGG
CCTCCATCATGCATTTGAACGCGCAAATGGGTCAGATTCTAAACGAAGCG
GACTACATGAAAGACAAGGAAGTCCTCTTCCACCAGCAATGCGAGCGGAC
GAACTCAGCGGCGCGATGGTGGCCTATTTTGCAAGTGGGCATCCTCCTGG
TCACGGGCGTGCTCCAGGTCAACAACCTCAAACAGTTTTTCAAGGCGAGG
AGATTGGTGTAG back to top
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