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Properties
| Property Name | Value |
|---|
| Product | protein of unknown function DUF292, eukaryotic |
| Orig transcript id | gnl|cribi|Naga_100136g20.3167.mrna |
| Orig protein id | gnl|cribi|Naga_100136g20.3167 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:438326..439737 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1361 ID=rna1361|Name=rna1361|organism=Nannochloropsis gaditana|type=mRNA|length=567bp
ATGTTGGTTATGACTTGCTCAAGCAATTCCCACAGTGCTACTCCTAGCGC
CTGCAGTTACAACTCGACGACCAGAGATAGCACACTAATCTTTAAGAGGC
CAGGTTTTACCATGTCTATGTATGTTCGAGTCAAGCGCAATCATCAGACA
ATATTCCTCCACGTAGAACCAAACGAAACAGTGCAAAGCGTCAAAGCACA
GGTTGGGGAGATATTAGGTCAGAGCGTTGAAAACATCCGCTTGTACGGAT
CAGATAGGACTCGAGACATGCCCGACGGGTCCTCTTTGGCTGAGTTCCAG
GACATCAAGAACGATTCGATCATATACGCAGTCTTTCGAAATGAAGGTAC
GAAAGAGGGACCAACTGCGAAAGCGAAAAATCAGGGGACGAGGGCGATCG
GTAGCGGAAATATATTCTCAAATCGCTTAGGAATGGTTAAAGGCATGCGG
AGAGGGGTGGGAGCGCATAGACGTGAACCTTTCGGCAATGAGTGGGGAAA
TGAAGGGGTAGCTGGCTGCAATGGCTCTCGATTTTTGCGAGCCGACCACG
TGTACATAACATTTTGA back to topprotein sequence of rna1361 >rna1361-protein ID=rna1361-protein|Name=rna1361|organism=Nannochloropsis gaditana|type=polypeptide|length=280bp
MLSSFFEAFKSFDVNKLKPFLKMAIQRIQIATNKKTAAVKITQRDIASLL
AQQKDEKAAIKVESIIREDSTIEAYGILELVCELLHERARLIASEKECPD
DLKSAVVTLIWSANRADIPELQEVKKQFTKKFGREFIERAEKDEDRLVNE
RVAHKLSIRPPSAAIVEKYLREIARSNNVEWTPLEQPSQLSLDQKAFAST
PAPTGVSVAMGPASGFGHLYTAPGGPGRAEGGAEGGGEGGTSMPIAHAVS
SSTHLGPDPGAGKADVPPAFQPPPPFPPLP back to topmRNA from alignment at CM002457.1:438326..439737+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1361 ID=rna1361|Name=rna1361|organism=Nannochloropsis gaditana|type=mRNA|length=1412bp|location=Sequence derived from alignment at CM002457.1:438326..439737+ (Nannochloropsis gaditana)
TGGCCCTCCCCTGTTCCCGCTCAGGCAAAACGCCGTATATCGTACGCACA
CCAACGCTCGTAAGACGATATTCGGCCACAAATTAATGTCGGGTaccatt
tttcttttgcaGGGATCGTCTGTTCCGGTAAAGTCGGTAGGATGCTAAGT
TCCTTTTTCGAGGCGTTCAAGTCCTTCGACGTGAACAAGCTCAAGCCTTT
CCTGAAGATGGCTATCCAGCGCATCCAAATCGCTACCAACAAAAAGACGG
CAGCTGTCAAGTACGTATATTCTGCTACTGAGAGAAATAGCGCTAGGTTA
GGTGAGCTTTAAAACTGTGTGTAAGGAGTAAGTTTTCGATCAAATACTTA
TGGCCCgctcattcccctccctttatACCCCAACTCTGGCAGGATTACAC
AGCGAGACATTGCAAGCCTCCTTGCACAGcaaaaggatgaaaaggCAGCC
ATCAAAGTGGAATCCATCATTCGGTGCGTCGTATTTCCGGCAACGGCGCA
CGTCCTCACCGTTTTGTACTTATGCGCCCAACGCATCATAATTGTCCTAT
TCTCTTGGCATTACGCATCGAATCAGGGAAGATTCCACCATCGAAGCCTA
CGGAATATTAGAGCTTGTGTGTGAGCTTTTGCATGAGCGCGCCCGTCTGA
TTGCATCCGAGAAAGAGTGCCCGGACGATCTGAAGTCCGCGGTCGTCACA
CTGATATGGTCGGCAAACAGAGCAGACATACCCGAGCTTCAGGAGGTGAA
GAAACAGTTCACGAAAAAGTTCGGAAGGGAATTCATCGAGCGGGCtgaga
aagacgaggaccGACTGGTGAATGAGCGCGTCGCCCACAAGCTTTCCATA
CGCCCGGTGAGTGCACTCGGAGAGAAGCCGGCagacgggcggggggacTC
TGGCTAGCTCCCGTTCCCCTAGgtttcgctccctccgcgaCGCCCTGGAG
AGTGTGGGACGCGCGGGCCGGATCCACCGACCGTGCTCTCGTCTCCATGA
CATGTgaacgtcctccccttctccctttcctccttcccccccatgTCATC
AGCCTTCCGCGGCCATCGTCGAGAAATACCTCCGGGAAATCGCGCGTTCA
AACAACGTGGAATGGACCCCTCTGGAGCAGCCGTCGCAGCTTAGCCTTGA
CCAGAAGGCCTtcgcctccacgcctgccccTACGGGAGTCTCGGTGGCCA
TGGGGCCCGCCTCGGGGTTCGGACACCTCTACACTGCTCCGGGCGGGCCG
ggcagggcggagggaggggcggagggagggggggaaggagggacgagcAT
GCCCATCGCCCACGCTGTATCCTCTTCGACCCATCTCGGCCCCGATCCTG
GCGCCGGCAAGGCCGACGTGCCGCCTGccttccaacctcctccccccttt
cctcccctaccc back to topCoding sequence (CDS) from alignment at CM002457.1:438326..439737+ >rna1361 ID=rna1361|Name=rna1361|organism=Nannochloropsis gaditana|type=CDS|length=3360bp|location=Sequence derived from alignment at CM002457.1:438326..439737+ (Nannochloropsis gaditana)
ATGCTAAGTTCCTTTTTCGAGGCGTTCAAGTCCTTCGACGTGAACAAGCT
CAAGCCTTTCCTGAAGATGGCTATCCAGCGCATCCAAATCGCTACCAACA
AAAAGACGGCAGCTGTCAAGATTACACAGCGAGACATTGCAAGCCTCCTT
GCACAGcaaaaggatgaaaaggCAGCCATCAAAGTGGAATCCATCATTCG
GGAAGATTCCACCATCGAAGCCTACGGAATATTAGAGCTTGTGTGTGAGC
TTTTGCATGAGCGCGCCCGTCTGATTGCATCCGAGAAAGAGTGCCCGGAC
GATCTGAAGTCCGCGGTCGTCACACTGATATGGTCGGCAAACAGAGCAGA
CATACCCGAGCTTCAGGAGGTGAAGAAACAGTTCACGAAAAAGTTCGGAA
GGGAATTCATCGAGCGGGCtgagaaagacgaggaccGACTGGTGAATGAG
CGCGTCGCCCACAAGCTTTCCATACGCCCGCCTTCCGCGGCCATCGTCGA
GAAATACCTCCGGGAAATCGCGCGTTCAAACAACGTGGAATGGACCCCTC
TGGAGCAGCCGTCGCAGCTTAGCCTTGACCAGAAGGCCTtcgcctccacg
cctgccccTACGGGAGTCTCGGTGGCCATGGGGCCCGCCTCGGGGTTCGG
ACACCTCTACACTGCTCCGGGCGGGCCGggcagggcggagggaggggcgg
agggagggggggaaggagggacgagcATGCCCATCGCCCACGCTGTATCC
TCTTCGACCCATCTCGGCCCCGATCCTGGCGCCGGCAAGGCCGACGTGCC
GCCTGccttccaacctcctcccccctttcctcccctacccATGCTAAGTT
CCTTTTTCGAGGCGTTCAAGTCCTTCGACGTGAACAAGCTCAAGCCTTTC
CTGAAGATGGCTATCCAGCGCATCCAAATCGCTACCAACAAAAAGACGGC
AGCTGTCAAGATTACACAGCGAGACATTGCAAGCCTCCTTGCACAGcaaa
aggatgaaaaggCAGCCATCAAAGTGGAATCCATCATTCGGGAAGATTCC
ACCATCGAAGCCTACGGAATATTAGAGCTTGTGTGTGAGCTTTTGCATGA
GCGCGCCCGTCTGATTGCATCCGAGAAAGAGTGCCCGGACGATCTGAAGT
CCGCGGTCGTCACACTGATATGGTCGGCAAACAGAGCAGACATACCCGAG
CTTCAGGAGGTGAAGAAACAGTTCACGAAAAAGTTCGGAAGGGAATTCAT
CGAGCGGGCtgagaaagacgaggaccGACTGGTGAATGAGCGCGTCGCCC
ACAAGCTTTCCATACGCCCGCCTTCCGCGGCCATCGTCGAGAAATACCTC
CGGGAAATCGCGCGTTCAAACAACGTGGAATGGACCCCTCTGGAGCAGCC
GTCGCAGCTTAGCCTTGACCAGAAGGCCTtcgcctccacgcctgccccTA
CGGGAGTCTCGGTGGCCATGGGGCCCGCCTCGGGGTTCGGACACCTCTAC
ACTGCTCCGGGCGGGCCGggcagggcggagggaggggcggagggaggggg
ggaaggagggacgagcATGCCCATCGCCCACGCTGTATCCTCTTCGACCC
ATCTCGGCCCCGATCCTGGCGCCGGCAAGGCCGACGTGCCGCCTGccttc
caacctcctcccccctttcctcccctacccATGCTAAGTTCCTTTTTCGA
GGCGTTCAAGTCCTTCGACGTGAACAAGCTCAAGCCTTTCCTGAAGATGG
CTATCCAGCGCATCCAAATCGCTACCAACAAAAAGACGGCAGCTGTCAAG
ATTACACAGCGAGACATTGCAAGCCTCCTTGCACAGcaaaaggatgaaaa
ggCAGCCATCAAAGTGGAATCCATCATTCGGGAAGATTCCACCATCGAAG
CCTACGGAATATTAGAGCTTGTGTGTGAGCTTTTGCATGAGCGCGCCCGT
CTGATTGCATCCGAGAAAGAGTGCCCGGACGATCTGAAGTCCGCGGTCGT
CACACTGATATGGTCGGCAAACAGAGCAGACATACCCGAGCTTCAGGAGG
TGAAGAAACAGTTCACGAAAAAGTTCGGAAGGGAATTCATCGAGCGGGCt
gagaaagacgaggaccGACTGGTGAATGAGCGCGTCGCCCACAAGCTTTC
CATACGCCCGCCTTCCGCGGCCATCGTCGAGAAATACCTCCGGGAAATCG
CGCGTTCAAACAACGTGGAATGGACCCCTCTGGAGCAGCCGTCGCAGCTT
AGCCTTGACCAGAAGGCCTtcgcctccacgcctgccccTACGGGAGTCTC
GGTGGCCATGGGGCCCGCCTCGGGGTTCGGACACCTCTACACTGCTCCGG
GCGGGCCGggcagggcggagggaggggcggagggagggggggaaggaggg
acgagcATGCCCATCGCCCACGCTGTATCCTCTTCGACCCATCTCGGCCC
CGATCCTGGCGCCGGCAAGGCCGACGTGCCGCCTGccttccaacctcctc
ccccctttcctcccctacccATGCTAAGTTCCTTTTTCGAGGCGTTCAAG
TCCTTCGACGTGAACAAGCTCAAGCCTTTCCTGAAGATGGCTATCCAGCG
CATCCAAATCGCTACCAACAAAAAGACGGCAGCTGTCAAGATTACACAGC
GAGACATTGCAAGCCTCCTTGCACAGcaaaaggatgaaaaggCAGCCATC
AAAGTGGAATCCATCATTCGGGAAGATTCCACCATCGAAGCCTACGGAAT
ATTAGAGCTTGTGTGTGAGCTTTTGCATGAGCGCGCCCGTCTGATTGCAT
CCGAGAAAGAGTGCCCGGACGATCTGAAGTCCGCGGTCGTCACACTGATA
TGGTCGGCAAACAGAGCAGACATACCCGAGCTTCAGGAGGTGAAGAAACA
GTTCACGAAAAAGTTCGGAAGGGAATTCATCGAGCGGGCtgagaaagacg
aggaccGACTGGTGAATGAGCGCGTCGCCCACAAGCTTTCCATACGCCCG
CCTTCCGCGGCCATCGTCGAGAAATACCTCCGGGAAATCGCGCGTTCAAA
CAACGTGGAATGGACCCCTCTGGAGCAGCCGTCGCAGCTTAGCCTTGACC
AGAAGGCCTtcgcctccacgcctgccccTACGGGAGTCTCGGTGGCCATG
GGGCCCGCCTCGGGGTTCGGACACCTCTACACTGCTCCGGGCGGGCCGgg
cagggcggagggaggggcggagggagggggggaaggagggacgagcATGC
CCATCGCCCACGCTGTATCCTCTTCGACCCATCTCGGCCCCGATCCTGGC
GCCGGCAAGGCCGACGTGCCGCCTGccttccaacctcctcccccctttcc
tcccctaccc back to top
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