EWM29316.1, cds1359 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29316.1 vs. NCBI_GenBank
Match: gi|585111842|gb|EWM29316.1| (protein of unknown function DUF292, eukaryotic, partial [Nannochloropsis gaditana]) HSP 1 Score: 569.696 bits (1467), Expect = 0.000e+0 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
Query: 1 MLSSFFEAFKSFDVNKLKPFLKMAIQRIQIATNKKTAAVKITQRDIASLLAQQKDEKAAIKVESIIREDSTIEAYGILELVCELLHERARLIASEKECPDDLKSAVVTLIWSANRADIPELQEVKKQFTKKFGREFIERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIARSNNVEWTPLEQPSQLSLDQKAFASTPAPTGVSVAMGPASGFGHLYTAPGGPGRAEGGAEGGGEGGTSMPIAHAVSSSTHLGPDPGAGKADVPPAFQPPPPFPPLP 280
MLSSFFEAFKSFDVNKLKPFLKMAIQRIQIATNKKTAAVKITQRDIASLLAQQKDEKAAIKVESIIREDSTIEAYGILELVCELLHERARLIASEKECPDDLKSAVVTLIWSANRADIPELQEVKKQFTKKFGREFIERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIARSNNVEWTPLEQPSQLSLDQKAFASTPAPTGVSVAMGPASGFGHLYTAPGGPGRAEGGAEGGGEGGTSMPIAHAVSSSTHLGPDPGAGKADVPPAFQPPPPFPPLP
Sbjct: 1 MLSSFFEAFKSFDVNKLKPFLKMAIQRIQIATNKKTAAVKITQRDIASLLAQQKDEKAAIKVESIIREDSTIEAYGILELVCELLHERARLIASEKECPDDLKSAVVTLIWSANRADIPELQEVKKQFTKKFGREFIERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIARSNNVEWTPLEQPSQLSLDQKAFASTPAPTGVSVAMGPASGFGHLYTAPGGPGRAEGGAEGGGEGGTSMPIAHAVSSSTHLGPDPGAGKADVPPAFQPPPPFPPLP 280
BLAST of EWM29316.1 vs. NCBI_GenBank
Match: gi|669139062|ref|XP_008605099.1| (hypothetical protein SDRG_01356 [Saprolegnia diclina VS20] >gi|530743143|gb|EQC41385.1| hypothetical protein SDRG_01356 [Saprolegnia diclina VS20]) HSP 1 Score: 225.713 bits (574), Expect = 1.516e-69 Identity = 121/269 (44.98%), Postives = 164/269 (60.97%), Query Frame = 0
Query: 12 FDVNKLKPFLKMAIQRIQIATNKKTAAVKITQRDIASLLAQQKDEKAAIKVESIIREDSTIEAYGILELVCELLHERARLIASEKECPDDLKSAVVTLIWSANRADIPELQEVKKQFTKKFGREFIERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIARSNNVEWTPLEQPSQLSLDQKAFASTPAPTGVSVAMGPASG--FGHLYTAPGGPGRAEGGAEG-----------GGEGGTSMPIAHAVSSSTHLGPDPGAGKADVP 267
F+V+KLKP LKMA+ RI I NKK A K+ ++++A LLA+ K+EKA I+VE +IRED +EAY ILEL+CEL+ ERA LI +E+ CP D++ AV TLIW+ANR +IPEL EVK Q TKK+G++F A ++ D VNERV HKLS++PP++ +V YL+EIA+ +NV W P+E P+ L A APTGV+V P SG + +Y PG+ G ++P +S P G DVP
Sbjct: 4 FNVDKLKPNLKMAVGRIGIIKNKKANAAKVLRKEVAKLLAEGKEEKARIRVEGLIREDFVVEAYEILELLCELVAERAALIKAERACPYDMREAVNTLIWAANRTEIPELNEVKSQLTKKYGQDFAAAALRNVDGCVNERVIHKLSVQPPNSFLVINYLKEIAKQHNVNWVPIETPAMDPL-----APMMAPTGVTVGQAPVSGPNYAAVYATAPPPGKLPSAFPNVPSAAPITLPVAAPAGATVPPPSVTLNSVQQAPAAGGDTNDVP 267
BLAST of EWM29316.1 vs. NCBI_GenBank
Match: gi|813109352|ref|XP_012194545.1| (hypothetical protein SPRG_00943 [Saprolegnia parasitica CBS 223.65] >gi|641541122|gb|KDO34885.1| hypothetical protein SPRG_00943 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 221.476 bits (563), Expect = 7.444e-68 Identity = 113/215 (52.56%), Postives = 151/215 (70.23%), Query Frame = 0
Query: 12 FDVNKLKPFLKMAIQRIQIATNKKTAAVKITQRDIASLLAQQKDEKAAIKVESIIREDSTIEAYGILELVCELLHERARLIASEKECPDDLKSAVVTLIWSANRADIPELQEVKKQFTKKFGREFIERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIARSNNVEWTPLEQPSQLSLDQKAFASTPAPTGVSVAMGPASG--FGHLY-TAP 223
F V+KLKP LKMA+ RI I NKK A K+ ++++A LLA+ K+EKA I+VE +IRED +EAY ILEL+CEL+ ERA LI +E+ CP D++ AV TLIW+ANR +IPEL EVK Q TKK+G++F A ++ D VNERV HKLS++PP++ +V YL+EIA+ +NV W P+E P+ L A APTG +V P SG + +Y TAP
Sbjct: 4 FSVDKLKPNLKMAVGRIGIIKNKKANAAKVLRKEVAKLLAEGKEEKARIRVEGLIREDFVVEAYEILELLCELVAERAALIKAERACPYDMREAVYTLIWAANRTEIPELNEVKSQLTKKYGQDFAAAALRNVDGCVNERVIHKLSVQPPNSFLVINYLKEIAKQHNVNWVPIEMPAMDPL-----APMIAPTGATVGQAPVSGPNYAAVYATAP 213
BLAST of EWM29316.1 vs. NCBI_GenBank
Match: gi|698809878|ref|XP_009837968.1| (hypothetical protein H257_12455 [Aphanomyces astaci] >gi|574107226|gb|ETV72740.1| hypothetical protein H257_12455 [Aphanomyces astaci]) HSP 1 Score: 216.853 bits (551), Expect = 4.020e-66 Identity = 114/219 (52.05%), Postives = 146/219 (66.67%), Query Frame = 0
Query: 12 FDVNKLKPFLKMAIQRIQIATNKKTAAVKITQRDIASLLAQQKDEKAAIKVESIIREDSTIEAYGILELVCELLHERARLIASEKECPDDLKSAVVTLIWSANRADIPELQEVKKQFTKKFGREFIERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIARSNNVEWTPLEQPSQLSLDQKAFASTPAPTGVSVAMGPASG--FGHLYTAPGGPGR 228
F+VNKLKP LKMA+ RI I NKK K ++++A LLA K+EKA I+VE +IRED IEAY I+EL+CEL+ ER LI SE+ECP D++ AV TLIW+A R +IPEL EVK Q TKK+G++F A ++ D VNERV HKLS++PP+A +V YL+EIA+ +NV W P E SQ+ A APTG S+ SG F +Y PGR
Sbjct: 4 FNVNKLKPSLKMAVHRIGIVKNKKAITSKAQRKEVAKLLADGKEEKARIRVEGLIREDFVIEAYEIIELLCELISERTPLIKSERECPYDMREAVCTLIWAATRTEIPELSEVKNQLTKKYGQDFTAAAMRNVDGCVNERVIHKLSVQPPNAYLVINYLKEIAKQHNVAWVPDE--SQIV---DPLAPMAAPTGTSIGQAGVSGPDFAAIYAEAPPPGR 217
BLAST of EWM29316.1 vs. NCBI_GenBank
Match: gi|673028262|ref|XP_008868092.1| (hypothetical protein H310_05213 [Aphanomyces invadans] >gi|574476865|gb|ETW03863.1| hypothetical protein H310_05213 [Aphanomyces invadans]) HSP 1 Score: 216.468 bits (550), Expect = 5.124e-66 Identity = 115/219 (52.51%), Postives = 146/219 (66.67%), Query Frame = 0
Query: 12 FDVNKLKPFLKMAIQRIQIATNKKTAAVKITQRDIASLLAQQKDEKAAIKVESIIREDSTIEAYGILELVCELLHERARLIASEKECPDDLKSAVVTLIWSANRADIPELQEVKKQFTKKFGREFIERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIARSNNVEWTPLEQPSQLSLDQKAFASTPAPTGVSVAMGPASG--FGHLYTAPGGPGR 228
F+VNKLKP LKMA+ RI I NKK K ++D+A LLA K+EKA I+VE +IRED IEAY I+EL+CEL+ ER LI SE+ECP D++ AV TLIW+A R +IPEL EVK Q TKK+G++F A ++ D VNERV HKLS++PP+A +V YL+EIA+ +NV W P E SQ+ A APTG S+ SG F +Y PGR
Sbjct: 4 FNVNKLKPNLKMAVSRIGIVKNKKAITSKAQRKDVAKLLADGKEEKARIRVEGLIREDFVIEAYEIIELLCELISERTPLIKSERECPYDMREAVCTLIWAATRTEIPELAEVKNQLTKKYGQDFTAAAMRNVDGCVNERVIHKLSVQPPNAYLVINYLKEIAKQHNVAWVPDE--SQIV---DPLAPMAAPTGSSIGQAGVSGPDFAAIYAEAPPPGR 217
BLAST of EWM29316.1 vs. NCBI_GenBank
Match: gi|1210522306|dbj|GAX19068.1| (hypothetical protein FisN_8Hh294 [Fistulifera solaris]) HSP 1 Score: 196.052 bits (497), Expect = 1.122e-58 Identity = 99/208 (47.60%), Postives = 141/208 (67.79%), Query Frame = 0
Query: 12 FDVNKLKPFLKMAIQRIQIATNKKTAAVKITQRDIASLLAQQ--KDEKAAIKVESIIREDSTIEAYGILELVCELLHERARLIASEKECPDDLKSAVVTLIWSANRADIPELQEVKKQFTKKFGREFIERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIARSNNVEWTPLEQPSQLSLDQKAFASTPAPTGVSVAMGPASGFG 217
F+ KLKP LKMA+ RIQIA+NKK A K R++A +LA+ K+EKA I+ E++IR+D IEAY IL+L CELL+ER +LI K+CP+DL + V T+IW+++R DIPEL ++KQF K+G+EF ERA ++ ++N+RV HKLS+ PP+AA+V+ YL I + V+W+P + + L Q AP G SV + +G G
Sbjct: 6 FNAKKLKPELKMAVGRIQIASNKKAALQKQNLREVAKMLAEDPPKEEKARIRAEALIRDDYLIEAYEILQLNCELLYERMKLIEYSKDCPNDLVTVVSTIIWASHRVDIPELVLIRKQFKAKYGKEFEERALQNAGNVLNQRVVHKLSVEPPAAALVQIYLERICEQHEVDWSPKLKLTAAQLSQ----PMAAPFGYSVGIAQGTGLG 209
BLAST of EWM29316.1 vs. NCBI_GenBank
Match: gi|1173960678|gb|OQS06784.1| (hypothetical protein THRCLA_01211 [Thraustotheca clavata]) HSP 1 Score: 193.356 bits (490), Expect = 3.890e-57 Identity = 98/193 (50.78%), Postives = 135/193 (69.95%), Query Frame = 0
Query: 23 MAIQRIQIATNKKTAAVKITQRDIASLLAQQKDEKAAIKVESIIREDSTIEAYGILELVCELLHERARLIASEKECPDDLKSAVVTLIWSANRADIPELQEVKKQFTKKFGREFIERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIARSNNVEWTPLEQPSQLSLDQKAFASTPAPTGVSVAMGPASG 215
MA+ RI I NKK A K+ +++++ LLA+ K+EKA I+VE +IRED +EAY ILEL+CEL+ ER LI SE+ECP D++ AV TLIW+A R +IPEL EVK Q TKK+G++F A ++ D VNERV HKLS++PP+A +V Y++EIA+ +N+ W P E +Q+ +D A APTG S+ SG
Sbjct: 1 MAVGRIGIVKNKKANAAKVQRKEVSKLLAEGKEEKARIRVEGLIREDFIVEAYEILELLCELIAERVALIKSERECPYDMREAVCTLIWAATRTEIPELNEVKNQLTKKYGQDFTAAALRNVDGCVNERVIHKLSVQPPNAYLVINYMKEIAKQHNINWVPDE--TQI-ID--PLAPMVAPTGSSIGQAAVSG 188
BLAST of EWM29316.1 vs. NCBI_GenBank
Match: gi|299472014|emb|CBN80097.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 193.356 bits (490), Expect = 2.556e-55 Identity = 95/183 (51.91%), Postives = 130/183 (71.04%), Query Frame = 0
Query: 1 MLSSFFEAFKSFDVNKLKPFLKMAIQRIQIATNKKTAAVKITQRDIASLLAQQKDEKAAIKVESIIREDSTIEAYGILELVCELLHERARLIASEKECPDDLKSAVVTLIWSANRADIPELQEVKKQFTKKFGREFIERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIARSNNVEWTP 183
M S +A FD NK+KPFLKM+I R+ + NKK +KI++++IA LLA K+EKA IKVE +IRED TIEAY +LEL CEL+ ER RL+AS+K+ P D++ AV T+IW+A+RA++ EL VK QF KK+G E++ AE +E VN +V KL +PPS+ +V +YL IA +VE+TP
Sbjct: 1 MTSLLKKAGLVFDENKVKPFLKMSITRLNLLVNKKANHIKISKKEIARLLADGKEEKARIKVEQVIREDFTIEAYDVLELHCELVAERMRLVASQKDVPPDMEQAVCTIIWAADRAEVSELSTVKSQFVKKYGSEYVRLAELNEGGCVNPKVVEKLDCQPPSSFVVTEYLLGIAEEYDVEYTP 183
BLAST of EWM29316.1 vs. NCBI_GenBank
Match: gi|568024937|gb|ETL98959.1| (hypothetical protein L917_04069 [Phytophthora parasitica]) HSP 1 Score: 191.43 bits (485), Expect = 2.616e-55 Identity = 114/223 (51.12%), Postives = 147/223 (65.92%), Query Frame = 0
Query: 2 LSSFFEAFKSFDVNKLKPFLKMAIQRIQIATNKKTAAVKITQRDIASLLAQQKDEKAAIKVESIIREDSTIEAYGILELVCELLHERARLIASEKECPDDLKSAVVTLIWSANRADIPELQEVKKQFTKKFGREFIERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIARSNNVEWTPLEQPSQLSLDQKAFASTPAPTGVSVAMGPASG--FGHLYTA 222
+S F + F+VNKLKP LKMA+ RI I NKK A +R++ LLA K+EKA I+VE IIR+D T+E Y ILEL+CELL ERA LI +E +CP D++ AV TLIW+A+R +IPEL EVKKQ TKK+G++F A ++ D VNERV KLS++PPSA +V Y++EIA+ V+W P E L A PAPTG +V G SG F LY +
Sbjct: 19 ISGFLGSMFGFNVNKLKPNLKMAVHRIGIVKNKKANAALAQRREVGRLLADGKEEKARIRVEGIIRDDFTMEGYEILELLCELLAERANLIKTEADCPYDMREAVCTLIWAASRTEIPELAEVKKQLTKKYGQDFEAAAIRNVDGCVNERVIQKLSVQPPSAFLVVNYMKEIAKEFKVDWEPDEAEVTDPL-----APIPAPTGATVTSGAVSGPEFAALYAS 236
BLAST of EWM29316.1 vs. NCBI_GenBank
Match: gi|566029589|gb|ETI52500.1| (hypothetical protein F443_04363 [Phytophthora parasitica P1569] >gi|567967207|gb|ETK92389.1| hypothetical protein L915_04233 [Phytophthora parasitica] >gi|567995656|gb|ETL45786.1| hypothetical protein L916_04184 [Phytophthora parasitica] >gi|568055365|gb|ETM52112.1| hypothetical protein L914_04180 [Phytophthora parasitica] >gi|570333327|gb|ETO81275.1| hypothetical protein F444_04381 [Phytophthora parasitica P1976] >gi|570957353|gb|ETP22332.1| hypothetical protein F441_04325 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 191.43 bits (485), Expect = 3.106e-55 Identity = 114/223 (51.12%), Postives = 147/223 (65.92%), Query Frame = 0
Query: 2 LSSFFEAFKSFDVNKLKPFLKMAIQRIQIATNKKTAAVKITQRDIASLLAQQKDEKAAIKVESIIREDSTIEAYGILELVCELLHERARLIASEKECPDDLKSAVVTLIWSANRADIPELQEVKKQFTKKFGREFIERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIARSNNVEWTPLEQPSQLSLDQKAFASTPAPTGVSVAMGPASG--FGHLYTA 222
+S F + F+VNKLKP LKMA+ RI I NKK A +R++ LLA K+EKA I+VE IIR+D T+E Y ILEL+CELL ERA LI +E +CP D++ AV TLIW+A+R +IPEL EVKKQ TKK+G++F A ++ D VNERV KLS++PPSA +V Y++EIA+ V+W P E L A PAPTG +V G SG F LY +
Sbjct: 19 ISGFLGSMFGFNVNKLKPNLKMAVHRIGIVKNKKANAALAQRREVGRLLADGKEEKARIRVEGIIRDDFTMEGYEILELLCELLAERANLIKTEADCPYDMREAVCTLIWAASRTEIPELAEVKKQLTKKYGQDFEAAAIRNVDGCVNERVIQKLSVQPPSAFLVVNYMKEIAKEFKVDWEPDEAEVTDPL-----APIPAPTGATVTSGAVSGPEFAALYAS 236 The following BLAST results are available for this feature:
BLAST of EWM29316.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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