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Properties
| Property Name | Value |
|---|
| Product | ubiquitin family protein |
| Orig transcript id | gnl|cribi|Naga_100136g19.3166.mrna |
| Orig protein id | gnl|cribi|Naga_100136g19.3166 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:437111..438214 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1360 ID=rna1360|Name=rna1360|organism=Nannochloropsis gaditana|type=mRNA|length=2453bp
TATACAGAACGCCACAAGGTCGTAGGCGCGGTGGTGAATTCGTTACTCCG
TGGTCTCAAGAAAAAATCAAGGCCTAAGTTTCATTATTTCCTCGCGTCGC
ACACCTCCTCACGCGTGAAACCGAGCCTGCAGGAGCTTCCGCCTTTGATT
TAGAGCGACAGCAGTAAAGCCATGCAGCGCTCTGTGCAAGCAGCCTTTCT
AGCCTGTATCTTAACTGCTTCCTACATAGACCTAGGGCATGCTTTTGTTT
TCCCCTCTTCCCGGCCACAGAGCACCCCATGTAGCATAGTCTCTACCTCC
CCGTACACCGCCAGTCCTGATAGCAGAGCAAGAATAACTATCGCACCCTC
CTGGATGGTGCCCCCTTCTTCATCGTCATCCTCCTCATCTTCTACGTCGT
CTTCGCCTGCAGCGGGCGTCACTCAGGAAAAAAGCAATCGGCGCGGCGGC
AGCCCAGCATCTCCCTCTACTAAAAACTCGGAGGCACCTGCTCCGGGGGA
GGAAGAAAGCAATCCACCCGCAGTGGACGTGGGAATTGCCAAAGCATTAG
CAAAGCCCAGTGAATCTCGCGCTGCAGAGTTGCGACAGGCAAAGGAGGCG
GAGCGGACCAAGAACAAGAAGTTTTTGAACCCGATCGAGATTCCTATCAA
GGCAGGGAGGGCGGCTCGGCGGGCGCTGGAAAGCCTGGGGCAGGTGGAAG
AGCCGGCGCCGAAAAATCCCGAGGATTACAGGTTATACTTTGACAAGAAA
TTCATGTACGCGATTCCAGCCCCCGGAGAGAAAACGCCCACGGTGCTGGT
GGTGGGTGCGACGGGGGACATTGGTCGGCAGGTGGTGCGGAAGCTCATTT
TGAAAGGGTACCGGGTGCAGGTCTTGGTCCGCAATTTGTACTCCACCACT
TTGAATTTGCTGGGCACGGGGGTGTCGTACGTGAAAGGCGACCTGTCCGA
CCTGTCCTCCCTGCGCACGGCTTGCGACGGCGCCGACAAGGTGGTGTACG
TGGCGCAGGCCCGCGAGGACGGCGATGCCCGTACCGTGGAATACCTGGGA
CTGCGTAATTTGGCGCAAGCCTTCCAGGATACCCGGGTGTCTGATGCGGG
TAAACGGGTGGCGACCAAGCGGACCTTGTTCAAGTTCCGGAAGCCGGCGG
ATCGGGGTGTGTGGGCCGTGGCCACGCCGAGCGCGGAGGGCGCGGAGGGC
GCGTGGACTGTGCAGGATGAGCGATCGGGCCGTCCCGCATTTGTGGGATC
CCTGCCTGTGGGTCCCGGGGGCTCAATTGTGCTCGAGAGCAAGAAACTGG
GGCTGAATCTGTCCAAATTCGGGGGTTTGCTGATGTTGTTCAAGGCCCAA
GGGGACGCGCAGACGTCCTTCCGCTTCGTAATTCGGACGAGCGCCTATGC
CGAGCAGGGAGTGCAGTACGAGATAGCCTTGCCCTTGGTCCGCAACCGCT
TTACCGCCTTCCGGATGAATTTTCGGGACTTTGTGCCCATGAAAGACGGG
ACGCCGTACGCGGGCGTCTTGGGGGGGCTGGGCGGGGTGACGGCGCTGGA
TCCGGGGGACGTGAAGCAGTTTGCCGTCATGGCCGTGAGGGAGGGAGGGG
CCGCCGCGGGCGTGGATGCAGCGGTGGCCAATCCTGCTTTCGCCTTGACC
ATGGAGGGAATCAAGGTGTTCCGGGCCCGGGAGCAAGCCGACGTGGTGCT
CCTGTCCTCCTCCGACATCACGCCCAAGACCGCCTTGAAGAGTCTGTCGG
AGATGGAGCGAGACCCGGCCTCCTTCGAGCGGGTCGAGCGCGGGAATTAC
TACAGGGCACAGGGGGAACTGGCTATGAAGAACGCGGGGCTGGCTTATTG
CATCGTCCGCATCTCGGATTTCACGAGCAGTCCCACGGAGGGACGCCCGC
TGAGCGTCTCCCGGAGTGGCAACAACATGGGCCTTATTTCCAGACCGGAC
GCGGCCACGGTCCTCATAAATTGTCTGTTCAACCCGACGGTCTGCAACAC
AGAGATCTACGCGTCCGAGAATCCCAGGTACGGCGACCGGGACATCCAAA
GGTTGCTGAACGAATTAGTAGAGCTGCCTCTGTGAGCCTGGGGTATCGAG
GACAGGTCACTCGACACACGGCTTCCAGTAATGGCGGGTCTCGTCGGTGG
TGAGGGGTGGAAGAATGTGGCATGTGGATGGAGGCTTGAGGGCAATCCTG
GATGTGGCTGCAGGGAGGGAAGTGTCCGCTAGTTAGACGCGTGCTGGCGC
AAACACCGACCGCGAAAATAATGACTGACAAGGGGGGGGGATGTCTGGGG
GGATGTCTGGAGGGAGTTTAGGTGACAAGCGCATCTAAAGAAGATGAGGA
CCTGCATAAAAGGCGTGGTACGCCCGCAAATGGTCGAAGACGTTACGCTT
TCAAAGATTTGTATTTCCGTGAAGCAAAAATTGCTCGTACCGTTCCCACC
ATT back to topprotein sequence of rna1360 >rna1360-protein ID=rna1360-protein|Name=rna1360|organism=Nannochloropsis gaditana|type=polypeptide|length=188bp
MLVMTCSSNSHSATPSACSYNSTTRDSTLIFKRPGFTMSMYVRVKRNHQT
IFLHVEPNETVQSVKAQVGEILGQSVENIRLYGSDRTRDMPDGSSLAEFQ
DIKNDSIIYAVFRNEGTKEGPTAKAKNQGTRAIGSGNIFSNRLGMVKGMR
RGVGAHRREPFGNEWGNEGVAGCNGSRFLRADHVYITF back to topmRNA from alignment at CM002457.1:437111..438214- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1360 ID=rna1360|Name=rna1360|organism=Nannochloropsis gaditana|type=mRNA|length=1104bp|location=Sequence derived from alignment at CM002457.1:437111..438214- (Nannochloropsis gaditana)
ATGTTGGTTATGTCTCCATTTTGACTCGATGGGTATCCTTGAATTCGCAG
GCTGATGCTTTCTGTCTCCGTGCCCATCATTTTACACATTTAATGCACGA
TTGCCGATTAACAGGACTTGCTCAAGCAATTCCCACAGTGCTACTCCTAG
CGCCTGCAGTTACAACTCGACGACCAGAGATAGCACACTAATCTTTAAGA
GGCCAGGTTTTACCATGTCTATGTACGTACAAGGATCGACGGTCTGTGGG
TTCCTCGCGGTTCATCTCTTACTGCTTCTTCTCTGTTTCACCCCTTACTG
CGTAGGTATGTTCGAGTCAAGCGCAATCATCAGACAATATTCCTCCACGT
AGAACCAAACGAAACAGTGCAAAGCGTCAAAGCACAGGTTGGGGAGATAT
TAGGTCAGAGCGTTGAAAACATCCGCTTGTACGGATCAGATAGGGTACGT
CCATGGATTGCCTGCTCGCAACGGATGCATTCCTGCCTGAATACTGTGGG
AGAGTACGATGAGTGCGAGAGTGTGGGGCATGGTAATTTTATATGTTGGA
AATAGTAACGTGGGGGCGCATCATGTTCGTCGGCAGCTCATTCCTGTTCA
CACATCCAGACTCGAGACATGCCCGACGGGTCCTCTTTGGCTGAGTTCCA
GGACATCAAGAACGATTCGATCATATACGCAGTCTTTCGAAATGAAGGTA
CGAAAGAGGGACCAACTGCGAAAGGTATGGGATAGGAGGTGCACAATCGC
TTGGAACGGGCCGGGTAACATGATAATTCTACGAACGAGGACTGCTTACA
GCGACATAGGAAGGCCGGCACATTGAAAGCGAAAAATCAGGGGACGAGGG
CGATCGGTAGCGGAAATATATTCTCAAATCGCTTAGGAATGGTTAAAGGC
ATGTCTGTTCTGCTTTCTTGAGACTGTCCTCGCGTTTCCAGTGATTAATT
CTGCGACATACCTGCTTTTCACGCACACGCCAGGCGGAGAGGGGTGGGAG
CGCATAGACGTGAACCTTTCGGCAATGAGTGGGGAAATGAAGGGGTAGCT
GGCTGCAATGGCTCTCGATTTTTGCGAGCCGACCACGTGTACATAACATT
TTGA back to topCoding sequence (CDS) from alignment at CM002457.1:437111..438214- >rna1360 ID=rna1360|Name=rna1360|organism=Nannochloropsis gaditana|type=CDS|length=3402bp|location=Sequence derived from alignment at CM002457.1:437111..438214- (Nannochloropsis gaditana)
GCGGAGAGGGGTGGGAGCGCATAGACGTGAACCTTTCGGCAATGAGTGGG
GAAATGAAGGGGTAGCTGGCTGCAATGGCTCTCGATTTTTGCGAGCCGAC
CACGTGTACATAACATTTTGACGAAAAATCAGGGGACGAGGGCGATCGGT
AGCGGAAATATATTCTCAAATCGCTTAGGAATGGTTAAAGGCATACTCGA
GACATGCCCGACGGGTCCTCTTTGGCTGAGTTCCAGGACATCAAGAACGA
TTCGATCATATACGCAGTCTTTCGAAATGAAGGTACGAAAGAGGGACCAA
CTGCGAAAGGTATGTTCGAGTCAAGCGCAATCATCAGACAATATTCCTCC
ACGTAGAACCAAACGAAACAGTGCAAAGCGTCAAAGCACAGGTTGGGGAG
ATATTAGGTCAGAGCGTTGAAAACATCCGCTTGTACGGATCAGATAGGGA
CTTGCTCAAGCAATTCCCACAGTGCTACTCCTAGCGCCTGCAGTTACAAC
TCGACGACCAGAGATAGCACACTAATCTTTAAGAGGCCAGGTTTTACCAT
GTCTATATGTTGGTTATGCGGAGAGGGGTGGGAGCGCATAGACGTGAACC
TTTCGGCAATGAGTGGGGAAATGAAGGGGTAGCTGGCTGCAATGGCTCTC
GATTTTTGCGAGCCGACCACGTGTACATAACATTTTGACGAAAAATCAGG
GGACGAGGGCGATCGGTAGCGGAAATATATTCTCAAATCGCTTAGGAATG
GTTAAAGGCATACTCGAGACATGCCCGACGGGTCCTCTTTGGCTGAGTTC
CAGGACATCAAGAACGATTCGATCATATACGCAGTCTTTCGAAATGAAGG
TACGAAAGAGGGACCAACTGCGAAAGGTATGTTCGAGTCAAGCGCAATCA
TCAGACAATATTCCTCCACGTAGAACCAAACGAAACAGTGCAAAGCGTCA
AAGCACAGGTTGGGGAGATATTAGGTCAGAGCGTTGAAAACATCCGCTTG
TACGGATCAGATAGGGACTTGCTCAAGCAATTCCCACAGTGCTACTCCTA
GCGCCTGCAGTTACAACTCGACGACCAGAGATAGCACACTAATCTTTAAG
AGGCCAGGTTTTACCATGTCTATATGTTGGTTATGCGGAGAGGGGTGGGA
GCGCATAGACGTGAACCTTTCGGCAATGAGTGGGGAAATGAAGGGGTAGC
TGGCTGCAATGGCTCTCGATTTTTGCGAGCCGACCACGTGTACATAACAT
TTTGACGAAAAATCAGGGGACGAGGGCGATCGGTAGCGGAAATATATTCT
CAAATCGCTTAGGAATGGTTAAAGGCATACTCGAGACATGCCCGACGGGT
CCTCTTTGGCTGAGTTCCAGGACATCAAGAACGATTCGATCATATACGCA
GTCTTTCGAAATGAAGGTACGAAAGAGGGACCAACTGCGAAAGGTATGTT
CGAGTCAAGCGCAATCATCAGACAATATTCCTCCACGTAGAACCAAACGA
AACAGTGCAAAGCGTCAAAGCACAGGTTGGGGAGATATTAGGTCAGAGCG
TTGAAAACATCCGCTTGTACGGATCAGATAGGGACTTGCTCAAGCAATTC
CCACAGTGCTACTCCTAGCGCCTGCAGTTACAACTCGACGACCAGAGATA
GCACACTAATCTTTAAGAGGCCAGGTTTTACCATGTCTATATGTTGGTTA
TGCGGAGAGGGGTGGGAGCGCATAGACGTGAACCTTTCGGCAATGAGTGG
GGAAATGAAGGGGTAGCTGGCTGCAATGGCTCTCGATTTTTGCGAGCCGA
CCACGTGTACATAACATTTTGACGAAAAATCAGGGGACGAGGGCGATCGG
TAGCGGAAATATATTCTCAAATCGCTTAGGAATGGTTAAAGGCATACTCG
AGACATGCCCGACGGGTCCTCTTTGGCTGAGTTCCAGGACATCAAGAACG
ATTCGATCATATACGCAGTCTTTCGAAATGAAGGTACGAAAGAGGGACCA
ACTGCGAAAGGTATGTTCGAGTCAAGCGCAATCATCAGACAATATTCCTC
CACGTAGAACCAAACGAAACAGTGCAAAGCGTCAAAGCACAGGTTGGGGA
GATATTAGGTCAGAGCGTTGAAAACATCCGCTTGTACGGATCAGATAGGG
ACTTGCTCAAGCAATTCCCACAGTGCTACTCCTAGCGCCTGCAGTTACAA
CTCGACGACCAGAGATAGCACACTAATCTTTAAGAGGCCAGGTTTTACCA
TGTCTATATGTTGGTTATGCGGAGAGGGGTGGGAGCGCATAGACGTGAAC
CTTTCGGCAATGAGTGGGGAAATGAAGGGGTAGCTGGCTGCAATGGCTCT
CGATTTTTGCGAGCCGACCACGTGTACATAACATTTTGACGAAAAATCAG
GGGACGAGGGCGATCGGTAGCGGAAATATATTCTCAAATCGCTTAGGAAT
GGTTAAAGGCATACTCGAGACATGCCCGACGGGTCCTCTTTGGCTGAGTT
CCAGGACATCAAGAACGATTCGATCATATACGCAGTCTTTCGAAATGAAG
GTACGAAAGAGGGACCAACTGCGAAAGGTATGTTCGAGTCAAGCGCAATC
ATCAGACAATATTCCTCCACGTAGAACCAAACGAAACAGTGCAAAGCGTC
AAAGCACAGGTTGGGGAGATATTAGGTCAGAGCGTTGAAAACATCCGCTT
GTACGGATCAGATAGGGACTTGCTCAAGCAATTCCCACAGTGCTACTCCT
AGCGCCTGCAGTTACAACTCGACGACCAGAGATAGCACACTAATCTTTAA
GAGGCCAGGTTTTACCATGTCTATATGTTGGTTATGCGGAGAGGGGTGGG
AGCGCATAGACGTGAACCTTTCGGCAATGAGTGGGGAAATGAAGGGGTAG
CTGGCTGCAATGGCTCTCGATTTTTGCGAGCCGACCACGTGTACATAACA
TTTTGACGAAAAATCAGGGGACGAGGGCGATCGGTAGCGGAAATATATTC
TCAAATCGCTTAGGAATGGTTAAAGGCATACTCGAGACATGCCCGACGGG
TCCTCTTTGGCTGAGTTCCAGGACATCAAGAACGATTCGATCATATACGC
AGTCTTTCGAAATGAAGGTACGAAAGAGGGACCAACTGCGAAAGGTATGT
TCGAGTCAAGCGCAATCATCAGACAATATTCCTCCACGTAGAACCAAACG
AAACAGTGCAAAGCGTCAAAGCACAGGTTGGGGAGATATTAGGTCAGAGC
GTTGAAAACATCCGCTTGTACGGATCAGATAGGGACTTGCTCAAGCAATT
CCCACAGTGCTACTCCTAGCGCCTGCAGTTACAACTCGACGACCAGAGAT
AGCACACTAATCTTTAAGAGGCCAGGTTTTACCATGTCTATATGTTGGTT
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